RNA–Protein interactions for RNA: ENST00000504677.5

POLR2J3-210, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-210ENST00000504677 ATAD2Q6PL18 1390 aa16.37■□□□□ 0.21
POLR2J3-210ENST00000504677 PANK3Q9H999 370 aa16.35■□□□□ 0.21
POLR2J3-210ENST00000504677 NPHP4O75161 1426 aaPredicted RBP16.35■□□□□ 0.21
POLR2J3-210ENST00000504677 RALBP1Q15311 655 aa16.33■□□□□ 0.2
POLR2J3-210ENST00000504677 SLC26A8Q96RN1 970 aa16.33■□□□□ 0.2
POLR2J3-210ENST00000504677 PTPRUQ92729 1446 aa16.33■□□□□ 0.2
POLR2J3-210ENST00000504677 USP32Q8NFA0 1604 aa16.33■□□□□ 0.2
POLR2J3-210ENST00000504677 CHD2O14647 1828 aaKnown RBP16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 PER1O15534 1290 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 SAFB2Q14151 953 aaKnown RBP eCLIP16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 MINK1Q8N4C8 1332 aaPredicted RBP16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 ROBO2Q9HCK4 1378 aa16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 NPC1L1Q9UHC9 1359 aa16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 PLEKHH1Q9ULM0 1364 aa16.32■□□□□ 0.2
POLR2J3-210ENST00000504677 KNSTRNQ9Y448 316 aa16.31■□□□□ 0.2
POLR2J3-210ENST00000504677 KDM4FA0A1W2PPD8 638 aa16.3■□□□□ 0.2
POLR2J3-210ENST00000504677 SRPK2P78362 688 aaKnown RBP16.3■□□□□ 0.2
POLR2J3-210ENST00000504677 ANKRD36BQ8N2N9 1353 aa16.29■□□□□ 0.2
POLR2J3-210ENST00000504677 PARD3Q8TEW0 1356 aa16.29■□□□□ 0.2
POLR2J3-210ENST00000504677 WAPLQ7Z5K2 1190 aa16.29■□□□□ 0.2
POLR2J3-210ENST00000504677 AMOTL2Q9Y2J4 779 aa16.29■□□□□ 0.2
POLR2J3-210ENST00000504677 NWD1Q149M9 1564 aa16.29■□□□□ 0.2
POLR2J3-210ENST00000504677 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.28■□□□□ 0.2
POLR2J3-210ENST00000504677 CDK19Q9BWU1 502 aa16.27■□□□□ 0.2
POLR2J3-210ENST00000504677 CABP2Q9NPB3 220 aa16.27■□□□□ 0.2
POLR2J3-210ENST00000504677 ATP7BP35670 1465 aa16.27■□□□□ 0.19
POLR2J3-210ENST00000504677 MYBBP1AQ9BQG0 1328 aaKnown RBP16.26■□□□□ 0.19
POLR2J3-210ENST00000504677 WASLO00401 505 aaPredicted RBP16.26■□□□□ 0.19
POLR2J3-210ENST00000504677 TMC1Q8TDI8 760 aa16.26■□□□□ 0.19
POLR2J3-210ENST00000504677 LMTK3Q96Q04 1460 aa16.25■□□□□ 0.19
POLR2J3-210ENST00000504677 TERF2IPQ9NYB0 399 aa16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 NSD3Q9BZ95 1437 aa16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 ITSN1Q15811 1721 aa16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 BRD4O60885 1362 aaPredicted RBP16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 NSD2O96028 1365 aa16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 TOPAZ1Q8N9V7 1692 aa16.24■□□□□ 0.19
POLR2J3-210ENST00000504677 AMER1Q5JTC6 1135 aaPredicted RBP16.23■□□□□ 0.19
POLR2J3-210ENST00000504677 SLC12A5Q9H2X9 1139 aa16.23■□□□□ 0.19
POLR2J3-210ENST00000504677 NKTRP30414 1462 aaKnown RBP16.22■□□□□ 0.19
POLR2J3-210ENST00000504677 NCKAP5LQ9HCH0 1330 aa16.22■□□□□ 0.19
POLR2J3-210ENST00000504677 CDC42BPGQ6DT37 1551 aa16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 KCNA6P17658 529 aa16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 HDGFL2Q7Z4V5 671 aaPredicted RBP16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 NLRP13Q86W25 1043 aa16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 MRS2Q9HD23 443 aa16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 A0A1W2PP64 1363 aa16.21■□□□□ 0.19
POLR2J3-210ENST00000504677 CGNL1Q0VF96 1302 aa16.2■□□□□ 0.18
POLR2J3-210ENST00000504677 CENPBP07199 599 aaPredicted RBP16.2■□□□□ 0.18
POLR2J3-210ENST00000504677 CC2D1BQ5T0F9 858 aaKnown RBP16.2■□□□□ 0.18
POLR2J3-210ENST00000504677 CD163L1Q9NR16 1453 aa16.2■□□□□ 0.18
POLR2J3-210ENST00000504677 PPIP5K1Q6PFW1 1433 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 ANKARQ7Z5J8 1434 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 NALCNQ8IZF0 1738 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 CARD14Q9BXL6 1004 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 FMN2Q9NZ56 1722 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 ANKRD26Q9UPS8 1709 aa16.19■□□□□ 0.18
POLR2J3-210ENST00000504677 AKAP12Q02952 1782 aa16.18■□□□□ 0.18
POLR2J3-210ENST00000504677 YTHDC1Q96MU7 727 aaKnown RBP16.18■□□□□ 0.18
POLR2J3-210ENST00000504677 CCDC61Q9Y6R9 512 aa16.18■□□□□ 0.18
POLR2J3-210ENST00000504677 MON2Q7Z3U7 1717 aa16.18■□□□□ 0.18
POLR2J3-210ENST00000504677 ADGRL3Q9HAR2 1447 aa16.18■□□□□ 0.18
POLR2J3-210ENST00000504677 KIF20BQ96Q89 1820 aa16.17■□□□□ 0.18
POLR2J3-210ENST00000504677 NUDT16Q96DE0 195 aaKnown RBP16.17■□□□□ 0.18
POLR2J3-210ENST00000504677 CNGB1Q14028 1251 aaPredicted RBP16.16■□□□□ 0.18
POLR2J3-210ENST00000504677 CPSF1Q10570 1443 aaKnown RBP16.16■□□□□ 0.18
POLR2J3-210ENST00000504677 EDC4Q6P2E9 1401 aaKnown RBP16.15■□□□□ 0.18
POLR2J3-210ENST00000504677 CABP1Q9NZU7 370 aa16.15■□□□□ 0.18
POLR2J3-210ENST00000504677 STRCQ7RTU9 1775 aa16.15■□□□□ 0.18
POLR2J3-210ENST00000504677 HSPA2P54652 639 aa16.13■□□□□ 0.17
POLR2J3-210ENST00000504677 PRR36Q9H6K5 1346 aa16.13■□□□□ 0.17
POLR2J3-210ENST00000504677 NCOA3Q9Y6Q9 1424 aa16.12■□□□□ 0.17
POLR2J3-210ENST00000504677 CCDC184Q52MB2 194 aa16.12■□□□□ 0.17
POLR2J3-210ENST00000504677 ZNF692Q9BU19 519 aaPredicted RBP16.12■□□□□ 0.17
POLR2J3-210ENST00000504677 NRKQ7Z2Y5 1582 aa16.12■□□□□ 0.17
POLR2J3-210ENST00000504677 PLEKHG3A1L390 1219 aa16.11■□□□□ 0.17
POLR2J3-210ENST00000504677 PPP2R1AP30153 589 aa16.11■□□□□ 0.17
POLR2J3-210ENST00000504677 ILDR1Q86SU0 546 aaPredicted RBP16.1■□□□□ 0.17
POLR2J3-210ENST00000504677 MORC1Q86VD1 984 aa16.1■□□□□ 0.17
POLR2J3-210ENST00000504677 INSRP06213 1382 aa16.1■□□□□ 0.17
POLR2J3-210ENST00000504677 STRCP1A6NGW2 1772 aa16.08■□□□□ 0.17
POLR2J3-210ENST00000504677 POLR3AO14802 1390 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-210ENST00000504677 DCCP43146 1447 aa16.08■□□□□ 0.16
POLR2J3-210ENST00000504677 RGPD8O14715 1765 aaPredicted RBP16.08■□□□□ 0.16
POLR2J3-210ENST00000504677 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
POLR2J3-210ENST00000504677 PNISRQ8TF01 805 aaKnown RBP16.07■□□□□ 0.16
POLR2J3-210ENST00000504677 USP6P35125 1406 aa16.06■□□□□ 0.16
POLR2J3-210ENST00000504677 FAM9BQ8IZU0 186 aa16.06■□□□□ 0.16
POLR2J3-210ENST00000504677 ACEP12821 1306 aa16.05■□□□□ 0.16
POLR2J3-210ENST00000504677 C14orf37Q86TY3 774 aa16.05■□□□□ 0.16
POLR2J3-210ENST00000504677 DMRT2Q9Y5R5 561 aa16.05■□□□□ 0.16
POLR2J3-210ENST00000504677 SCAF1Q9H7N4 1312 aaKnown RBP16.04■□□□□ 0.16
POLR2J3-210ENST00000504677 FYB1O15117 783 aa16.04■□□□□ 0.16
POLR2J3-210ENST00000504677 KIF1AQ12756 1690 aa16.04■□□□□ 0.16
POLR2J3-210ENST00000504677 TTC21AQ8NDW8 1320 aa16.03■□□□□ 0.16
POLR2J3-210ENST00000504677 C19orf44Q9H6X5 657 aa16.02■□□□□ 0.16
POLR2J3-210ENST00000504677 SSH2Q76I76 1423 aa16.02■□□□□ 0.15
POLR2J3-210ENST00000504677 TMEM94Q12767 1356 aa16.01■□□□□ 0.15
POLR2J3-210ENST00000504677 NUTM2FA1L443 756 aa16.01■□□□□ 0.15
POLR2J3-210ENST00000504677 HNRNPUQ00839 825 aaKnown RBP eCLIP16.01■□□□□ 0.15
POLR2J3-210ENST00000504677 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms