RNA–Protein interactions for RNA: ENST00000504669.5

ITGA1-203, Transcript of integrin subunit alpha 1, humanhuman

TSL 1 (best)

Gene ITGA1, Length 6,276 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA1-203ENST00000504669 FILIP1Q7Z7B0 1213 aa12.41□□□□□ -0.42
ITGA1-203ENST00000504669 TMX1Q9H3N1 280 aa12.41□□□□□ -0.42
ITGA1-203ENST00000504669 PLEKHD1A6NEE1 506 aa12.41□□□□□ -0.42
ITGA1-203ENST00000504669 ODF2Q5BJF6 829 aa12.41□□□□□ -0.42
ITGA1-203ENST00000504669 CLNS1AP54105 237 aaKnown RBP12.41□□□□□ -0.42
ITGA1-203ENST00000504669 DBN1Q16643 649 aa12.41□□□□□ -0.42
ITGA1-203ENST00000504669 NAT10Q9H0A0 1025 aaKnown RBP12.41□□□□□ -0.42
ITGA1-203ENST00000504669 RSPH14Q9UHP6 348 aa12.4□□□□□ -0.42
ITGA1-203ENST00000504669 SH3BGRP55822 239 aaPredicted RBP12.4□□□□□ -0.42
ITGA1-203ENST00000504669 CEP63Q96MT8 703 aa12.4□□□□□ -0.42
ITGA1-203ENST00000504669 OGFRQ9NZT2 677 aa12.4□□□□□ -0.42
ITGA1-203ENST00000504669 DHX8Q14562 1220 aaKnown RBP12.4□□□□□ -0.42
ITGA1-203ENST00000504669 KDM2AQ9Y2K7 1162 aa12.4□□□□□ -0.42
ITGA1-203ENST00000504669 FBXW7Q969H0 707 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 GBP3Q9H0R5 595 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 UBXN4Q92575 508 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 MBD3O95983 291 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 TSPY4P0CV99 314 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 TSPY10P0CW01 314 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 BICD2Q8TD16 824 aa12.39□□□□□ -0.43
ITGA1-203ENST00000504669 HSPA5P11021 654 aaKnown RBP12.38□□□□□ -0.43
ITGA1-203ENST00000504669 KRBA2Q6ZNG9 492 aa12.38□□□□□ -0.43
ITGA1-203ENST00000504669 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
ITGA1-203ENST00000504669 CRBNQ96SW2 442 aa12.38□□□□□ -0.43
ITGA1-203ENST00000504669 SMC2O95347 1197 aa12.38□□□□□ -0.43
ITGA1-203ENST00000504669 MAP2K1Q02750 393 aaPredicted RBP12.38□□□□□ -0.43
ITGA1-203ENST00000504669 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
ITGA1-203ENST00000504669 SRRTQ9BXP5 876 aaKnown RBP12.38□□□□□ -0.43
ITGA1-203ENST00000504669 MCM5P33992 734 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 APBB1O00213 710 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 RTF1Q92541 710 aaKnown RBP12.37□□□□□ -0.43
ITGA1-203ENST00000504669 CEP57Q86XR8 500 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 SMC4Q9NTJ3 1288 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 ERLIN2O94905 339 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 ZNF853P0CG23 659 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 HOOK1Q9UJC3 728 aaKnown RBP12.37□□□□□ -0.43
ITGA1-203ENST00000504669 RPUSD2Q8IZ73 545 aaKnown RBP12.37□□□□□ -0.43
ITGA1-203ENST00000504669 TERF2IPQ9NYB0 399 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 POGKQ9P215 609 aa12.37□□□□□ -0.43
ITGA1-203ENST00000504669 AEBP2Q6ZN18 517 aaPredicted RBP12.36□□□□□ -0.43
ITGA1-203ENST00000504669 WDR63Q8IWG1 891 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 MPNDQ8N594 471 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 ATP6V1AP38606 617 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 DMTNQ08495 405 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 KIF3CO14782 793 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 KIF3BO15066 747 aa12.36□□□□□ -0.43
ITGA1-203ENST00000504669 MRFAP1L1Q96HT8 127 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 LRRFIP2Q9Y608 721 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 IPO8O15397 1037 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 MSL1Q68DK7 614 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 FAM184BQ9ULE4 1060 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 C11orf95C9JLR9 678 aaPredicted RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 PRPF40AO75400 957 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 CEP83Q9Y592 693 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 KIF5BP33176 963 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 HSPA4P34932 840 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 GIGYF2Q6Y7W6 1299 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 SEPT7Q16181 437 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 SCLT1Q96NL6 688 aa12.35□□□□□ -0.43
ITGA1-203ENST00000504669 BAZ1BQ9UIG0 1483 aaKnown RBP12.35□□□□□ -0.43
ITGA1-203ENST00000504669 IGSF3O75054 1194 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 KIF4AO95239 1232 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 KCNH8Q96L42 1107 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 IQCEQ6IPM2 695 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 GCKP35557 465 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 RBBP5Q15291 538 aaKnown RBP12.34□□□□□ -0.43
ITGA1-203ENST00000504669 CRACR2AQ9BSW2 395 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 C22orf23Q9BZE7 217 aa12.34□□□□□ -0.43
ITGA1-203ENST00000504669 MAP9Q49MG5 647 aa12.33□□□□□ -0.44
ITGA1-203ENST00000504669 UTP14CQ5TAP6 766 aaKnown RBP12.33□□□□□ -0.44
ITGA1-203ENST00000504669 CASQ1P31415 396 aa12.33□□□□□ -0.44
ITGA1-203ENST00000504669 TAX1BP1Q86VP1 789 aa12.33□□□□□ -0.44
ITGA1-203ENST00000504669 SPATS2LQ9NUQ6 558 aaKnown RBP12.33□□□□□ -0.44
ITGA1-203ENST00000504669 SYCP1Q15431 976 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 FAM184AQ8NB25 1140 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 SMARCE1Q969G3 411 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 MCM3P25205 808 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 CCDC160A6NGH7 325 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 PPM1EQ8WY54 764 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 SIN3AQ96ST3 1273 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 PDE3BQ13370 1112 aa12.32□□□□□ -0.44
ITGA1-203ENST00000504669 PTPN14Q15678 1187 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 OLFM4Q6UX06 510 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 MCM4P33991 863 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 CEP128Q6ZU80 1094 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 SMARCC1Q92922 1105 aaPredicted RBP12.31□□□□□ -0.44
ITGA1-203ENST00000504669 FEZ1Q99689 392 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 HSP90AB2PQ58FF8 381 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.31□□□□□ -0.44
ITGA1-203ENST00000504669 POTEB2H3BUK9 544 aa12.31□□□□□ -0.44
ITGA1-203ENST00000504669 GABPB1Q06547 395 aaPredicted RBP12.31□□□□□ -0.44
ITGA1-203ENST00000504669 ZBED9Q6R2W3 1325 aa12.3□□□□□ -0.44
ITGA1-203ENST00000504669 PPP2R5AQ15172 486 aa12.3□□□□□ -0.44
ITGA1-203ENST00000504669 ERC1Q8IUD2 1116 aa12.3□□□□□ -0.44
ITGA1-203ENST00000504669 NAP1L3Q99457 506 aaPredicted RBP12.3□□□□□ -0.44
ITGA1-203ENST00000504669 FMNL2Q96PY5 1086 aa12.3□□□□□ -0.44
ITGA1-203ENST00000504669 EFCC1Q9HA90 598 aa12.3□□□□□ -0.44
ITGA1-203ENST00000504669 ZFYP08048 801 aaPredicted RBP12.29□□□□□ -0.44
ITGA1-203ENST00000504669 WHAMMQ8TF30 809 aa12.29□□□□□ -0.44
ITGA1-203ENST00000504669 CGNL1Q0VF96 1302 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms