RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 NPHP4O75161 1426 aaPredicted RBP14.52□□□□□ -0.08
TPM3-217ENST00000504663 ROBO2Q9HCK4 1378 aa14.52□□□□□ -0.08
TPM3-217ENST00000504663 TBX22Q9Y458 520 aa14.51□□□□□ -0.09
TPM3-217ENST00000504663 EID1Q9Y6B2 187 aa14.51□□□□□ -0.09
TPM3-217ENST00000504663 PIK3R4Q99570 1358 aa14.5□□□□□ -0.09
TPM3-217ENST00000504663 TMF1P82094 1093 aa14.5□□□□□ -0.09
TPM3-217ENST00000504663 STRCP1A6NGW2 1772 aa14.5□□□□□ -0.09
TPM3-217ENST00000504663 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
TPM3-217ENST00000504663 STK26Q9P289 416 aa14.49□□□□□ -0.09
TPM3-217ENST00000504663 ANKLE2Q86XL3 938 aa14.48□□□□□ -0.09
TPM3-217ENST00000504663 SIRT1Q96EB6 747 aa14.48□□□□□ -0.09
TPM3-217ENST00000504663 PRAM1Q96QH2 718 aa14.48□□□□□ -0.09
TPM3-217ENST00000504663 TOPAZ1Q8N9V7 1692 aa14.48□□□□□ -0.09
TPM3-217ENST00000504663 NALCNQ8IZF0 1738 aa14.47□□□□□ -0.09
TPM3-217ENST00000504663 MIER1Q8N108 512 aa14.47□□□□□ -0.09
TPM3-217ENST00000504663 NCKAP5LQ9HCH0 1330 aa14.46□□□□□ -0.09
TPM3-217ENST00000504663 USP32Q8NFA0 1604 aa14.46□□□□□ -0.09
TPM3-217ENST00000504663 WAPLQ7Z5K2 1190 aa14.45□□□□□ -0.1
TPM3-217ENST00000504663 CD163L1Q9NR16 1453 aa14.44□□□□□ -0.1
TPM3-217ENST00000504663 PER1O15534 1290 aaPredicted RBP14.43□□□□□ -0.1
TPM3-217ENST00000504663 PUS7Q96PZ0 661 aaKnown RBP14.43□□□□□ -0.1
TPM3-217ENST00000504663 ATP7BP35670 1465 aa14.43□□□□□ -0.1
TPM3-217ENST00000504663 FMN2Q9NZ56 1722 aa14.42□□□□□ -0.1
TPM3-217ENST00000504663 HSPA2P54652 639 aa14.42□□□□□ -0.1
TPM3-217ENST00000504663 SAFB2Q14151 953 aaKnown RBP eCLIP14.42□□□□□ -0.1
TPM3-217ENST00000504663 MINK1Q8N4C8 1332 aaPredicted RBP14.41□□□□□ -0.1
TPM3-217ENST00000504663 AMOTL2Q9Y2J4 779 aa14.41□□□□□ -0.1
TPM3-217ENST00000504663 CDC42BPGQ6DT37 1551 aa14.41□□□□□ -0.1
TPM3-217ENST00000504663 CDCA8Q53HL2 280 aa14.4□□□□□ -0.1
TPM3-217ENST00000504663 BCANQ96GW7 911 aa14.4□□□□□ -0.1
TPM3-217ENST00000504663 POLR3GLQ9BT43 218 aa14.4□□□□□ -0.1
TPM3-217ENST00000504663 EVC2Q86UK5 1308 aa14.4□□□□□ -0.1
TPM3-217ENST00000504663 AKAP12Q02952 1782 aa14.39□□□□□ -0.11
TPM3-217ENST00000504663 NKTRP30414 1462 aaKnown RBP14.39□□□□□ -0.11
TPM3-217ENST00000504663 XIRP1Q702N8 1843 aaKnown RBP14.39□□□□□ -0.11
TPM3-217ENST00000504663 MON2Q7Z3U7 1717 aa14.39□□□□□ -0.11
TPM3-217ENST00000504663 KCNA6P17658 529 aa14.39□□□□□ -0.11
TPM3-217ENST00000504663 POGKQ9P215 609 aa14.39□□□□□ -0.11
TPM3-217ENST00000504663 NRKQ7Z2Y5 1582 aa14.39□□□□□ -0.11
TPM3-217ENST00000504663 RGPD8O14715 1765 aaPredicted RBP14.37□□□□□ -0.11
TPM3-217ENST00000504663 PANK3Q9H999 370 aa14.37□□□□□ -0.11
TPM3-217ENST00000504663 CABP2Q9NPB3 220 aa14.37□□□□□ -0.11
TPM3-217ENST00000504663 PRR36Q9H6K5 1346 aa14.37□□□□□ -0.11
TPM3-217ENST00000504663 ATAD2Q6PL18 1390 aa14.36□□□□□ -0.11
TPM3-217ENST00000504663 NINLQ9Y2I6 1382 aa14.36□□□□□ -0.11
TPM3-217ENST00000504663 ITSN1Q15811 1721 aa14.36□□□□□ -0.11
TPM3-217ENST00000504663 CDK19Q9BWU1 502 aa14.36□□□□□ -0.11
TPM3-217ENST00000504663 PRKRIP1Q9H875 184 aaPredicted RBP14.36□□□□□ -0.11
TPM3-217ENST00000504663 FOXD4L1Q9NU39 408 aa14.36□□□□□ -0.11
TPM3-217ENST00000504663 PARD3Q8TEW0 1356 aa14.35□□□□□ -0.11
TPM3-217ENST00000504663 ANKRD26Q9UPS8 1709 aa14.35□□□□□ -0.11
TPM3-217ENST00000504663 ADGRL3Q9HAR2 1447 aa14.35□□□□□ -0.11
TPM3-217ENST00000504663 WASLO00401 505 aaPredicted RBP14.35□□□□□ -0.11
TPM3-217ENST00000504663 CARD14Q9BXL6 1004 aa14.35□□□□□ -0.11
TPM3-217ENST00000504663 ANKRD36BQ8N2N9 1353 aa14.34□□□□□ -0.11
TPM3-217ENST00000504663 NPC1L1Q9UHC9 1359 aa14.34□□□□□ -0.11
TPM3-217ENST00000504663 SLC12A5Q9H2X9 1139 aa14.34□□□□□ -0.11
TPM3-217ENST00000504663 A0A1W2PP64 1363 aa14.34□□□□□ -0.11
TPM3-217ENST00000504663 CPSF1Q10570 1443 aaKnown RBP14.32□□□□□ -0.12
TPM3-217ENST00000504663 NSD3Q9BZ95 1437 aa14.32□□□□□ -0.12
TPM3-217ENST00000504663 KIF20BQ96Q89 1820 aa14.32□□□□□ -0.12
TPM3-217ENST00000504663 ANP32CO43423 234 aa14.31□□□□□ -0.12
TPM3-217ENST00000504663 PPIP5K1Q6PFW1 1433 aa14.31□□□□□ -0.12
TPM3-217ENST00000504663 ANKARQ7Z5J8 1434 aa14.31□□□□□ -0.12
TPM3-217ENST00000504663 CCER2I3L3R5 266 aa14.3□□□□□ -0.12
TPM3-217ENST00000504663 SRPK2P78362 688 aaKnown RBP14.3□□□□□ -0.12
TPM3-217ENST00000504663 CCDC184Q52MB2 194 aa14.29□□□□□ -0.12
TPM3-217ENST00000504663 KTN1Q86UP2 1357 aaKnown RBP14.29□□□□□ -0.12
TPM3-217ENST00000504663 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
TPM3-217ENST00000504663 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
TPM3-217ENST00000504663 LRRC7Q96NW7 1537 aa14.27□□□□□ -0.12
TPM3-217ENST00000504663 MARF1Q9Y4F3 1742 aaKnown RBP14.27□□□□□ -0.13
TPM3-217ENST00000504663 USP54Q70EL1 1684 aa14.26□□□□□ -0.13
TPM3-217ENST00000504663 SSH2Q76I76 1423 aa14.26□□□□□ -0.13
TPM3-217ENST00000504663 NCOA3Q9Y6Q9 1424 aa14.25□□□□□ -0.13
TPM3-217ENST00000504663 TMC1Q8TDI8 760 aa14.25□□□□□ -0.13
TPM3-217ENST00000504663 RBM33Q96EV2 1170 aaKnown RBP14.25□□□□□ -0.13
TPM3-217ENST00000504663 CABP1Q9NZU7 370 aa14.25□□□□□ -0.13
TPM3-217ENST00000504663 POLR3AO14802 1390 aaPredicted RBP14.24□□□□□ -0.13
TPM3-217ENST00000504663 DCCP43146 1447 aa14.24□□□□□ -0.13
TPM3-217ENST00000504663 EDC4Q6P2E9 1401 aaKnown RBP14.24□□□□□ -0.13
TPM3-217ENST00000504663 TMEM94Q12767 1356 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 PLEKHG3A1L390 1219 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 RALBP1Q15311 655 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 PIK3C2AO00443 1686 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 LTBP4Q8N2S1 1624 aa14.23□□□□□ -0.13
TPM3-217ENST00000504663 NSD2O96028 1365 aa14.22□□□□□ -0.13
TPM3-217ENST00000504663 MYBBP1AQ9BQG0 1328 aaKnown RBP14.22□□□□□ -0.13
TPM3-217ENST00000504663 ZNF335Q9H4Z2 1342 aaPredicted RBP14.22□□□□□ -0.13
TPM3-217ENST00000504663 CC2D1BQ5T0F9 858 aaKnown RBP14.22□□□□□ -0.13
TPM3-217ENST00000504663 KNSTRNQ9Y448 316 aa14.22□□□□□ -0.13
TPM3-217ENST00000504663 USP6P35125 1406 aa14.22□□□□□ -0.13
TPM3-217ENST00000504663 MST1RQ04912 1400 aa14.22□□□□□ -0.13
TPM3-217ENST00000504663 SCAF1Q9H7N4 1312 aaKnown RBP14.21□□□□□ -0.13
TPM3-217ENST00000504663 KIF1AQ12756 1690 aa14.21□□□□□ -0.13
TPM3-217ENST00000504663 TRPM3Q9HCF6 1732 aaPredicted RBP14.21□□□□□ -0.14
TPM3-217ENST00000504663 SHPRHQ149N8 1683 aa14.2□□□□□ -0.14
TPM3-217ENST00000504663 BRD4O60885 1362 aaPredicted RBP14.2□□□□□ -0.14
TPM3-217ENST00000504663 C1orf167Q5SNV9 1468 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms