RNA–Protein interactions for RNA: ENST00000504335.1

SMTN-221, Transcript of smoothelin, humanhuman

TSL 2

Gene SMTN, Length 2,608 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-221ENST00000504335 MORC2Q9Y6X9 1032 aaPredicted RBP16.7■□□□□ 0.26
SMTN-221ENST00000504335 CTIFO43310 598 aaKnown RBP16.7■□□□□ 0.26
SMTN-221ENST00000504335 ZBTB9Q96C00 473 aa16.7■□□□□ 0.26
SMTN-221ENST00000504335 NPC1L1Q9UHC9 1359 aa16.69■□□□□ 0.26
SMTN-221ENST00000504335 BCORL1Q5H9F3 1711 aa16.69■□□□□ 0.26
SMTN-221ENST00000504335 GTF2A1P52655 376 aaPredicted RBP16.68■□□□□ 0.26
SMTN-221ENST00000504335 NCAPGQ9BPX3 1015 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 SPTLC3Q9NUV7 552 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 CTNNA3Q9UI47 895 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 DENND4BO75064 1496 aaPredicted RBP16.68■□□□□ 0.26
SMTN-221ENST00000504335 TEX14Q8IWB6 1497 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 DUSP27Q5VZP5 1158 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 C14orf37Q86TY3 774 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 PTPRKQ15262 1439 aa16.68■□□□□ 0.26
SMTN-221ENST00000504335 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.67■□□□□ 0.26
SMTN-221ENST00000504335 BANK1Q8NDB2 785 aa16.67■□□□□ 0.26
SMTN-221ENST00000504335 RPRD2Q5VT52 1461 aaKnown RBP16.67■□□□□ 0.26
SMTN-221ENST00000504335 PRIM1P49642 420 aaKnown RBP16.67■□□□□ 0.26
SMTN-221ENST00000504335 USP47Q96K76 1375 aa16.67■□□□□ 0.26
SMTN-221ENST00000504335 SMC4Q9NTJ3 1288 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 FAM177BA6PVY3 158 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 CAVIN1Q6NZI2 390 aaKnown RBP16.66■□□□□ 0.26
SMTN-221ENST00000504335 PMFBP1Q8TBY8 1022 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 THOC2Q8NI27 1593 aaKnown RBP16.66■□□□□ 0.26
SMTN-221ENST00000504335 NOP2P46087 812 aaKnown RBP16.66■□□□□ 0.26
SMTN-221ENST00000504335 KRT222Q8N1A0 295 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 CLUAP1Q96AJ1 413 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 BRMS1Q9HCU9 246 aa16.66■□□□□ 0.26
SMTN-221ENST00000504335 PARD3Q8TEW0 1356 aa16.65■□□□□ 0.26
SMTN-221ENST00000504335 BRPF1P55201 1214 aaPredicted RBP16.65■□□□□ 0.26
SMTN-221ENST00000504335 BAG4O95429 457 aaKnown RBP16.65■□□□□ 0.26
SMTN-221ENST00000504335 TOP2BQ02880 1626 aa16.64■□□□□ 0.25
SMTN-221ENST00000504335 RSPH14Q9UHP6 348 aa16.64■□□□□ 0.25
SMTN-221ENST00000504335 MCCP23508 829 aa16.64■□□□□ 0.25
SMTN-221ENST00000504335 LRSAM1Q6UWE0 723 aa16.64■□□□□ 0.25
SMTN-221ENST00000504335 PDE3AQ14432 1141 aa16.63■□□□□ 0.25
SMTN-221ENST00000504335 SIRT1Q96EB6 747 aa16.63■□□□□ 0.25
SMTN-221ENST00000504335 RASSF4Q9H2L5 321 aa16.63■□□□□ 0.25
SMTN-221ENST00000504335 CEP83Q9Y592 693 aa16.63■□□□□ 0.25
SMTN-221ENST00000504335 ICE2Q659A1 982 aa16.62■□□□□ 0.25
SMTN-221ENST00000504335 RIOK3O14730 519 aaKnown RBP16.62■□□□□ 0.25
SMTN-221ENST00000504335 PRR29P0C7W0 189 aa16.62■□□□□ 0.25
SMTN-221ENST00000504335 ERICH4A6NGS2 130 aa16.61■□□□□ 0.25
SMTN-221ENST00000504335 DHX16O60231 1041 aaKnown RBP16.61■□□□□ 0.25
SMTN-221ENST00000504335 EGFL6Q8IUX8 553 aa16.61■□□□□ 0.25
SMTN-221ENST00000504335 SLC26A8Q96RN1 970 aa16.61■□□□□ 0.25
SMTN-221ENST00000504335 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
SMTN-221ENST00000504335 CCDC172P0C7W6 258 aa16.6■□□□□ 0.25
SMTN-221ENST00000504335 GOLGA2Q08379 1002 aa16.6■□□□□ 0.25
SMTN-221ENST00000504335 MPHOSPH9Q99550 1183 aa16.6■□□□□ 0.25
SMTN-221ENST00000504335 SSFA2P28290 1259 aa16.59■□□□□ 0.25
SMTN-221ENST00000504335 KIF18AQ8NI77 898 aa16.58■□□□□ 0.25
SMTN-221ENST00000504335 ANKRD30AQ9BXX3 1397 aa16.58■□□□□ 0.24
SMTN-221ENST00000504335 HNRNPH2P55795 449 aaKnown RBP16.58■□□□□ 0.24
SMTN-221ENST00000504335 NCBP1Q09161 790 aaKnown RBP16.58■□□□□ 0.24
SMTN-221ENST00000504335 SPINK5Q9NQ38 1064 aaPredicted RBP16.58■□□□□ 0.24
SMTN-221ENST00000504335 KIF21AQ7Z4S6 1674 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 RAD50Q92878 1312 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 GOLGA6L6A8MZA4 724 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 GUCY2CP25092 1073 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 MTUS2Q5JR59 1369 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 CYP2C19P33261 490 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 SATB1Q01826 763 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 LMBRD1Q9NUN5 540 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 KDM5CP41229 1560 aa16.57■□□□□ 0.24
SMTN-221ENST00000504335 ZBTB7CA1YPR0 619 aa16.56■□□□□ 0.24
SMTN-221ENST00000504335 NBPF20Q3BBV1 942 aa16.56■□□□□ 0.24
SMTN-221ENST00000504335 HSP90AB3PQ58FF7 597 aa16.56■□□□□ 0.24
SMTN-221ENST00000504335 CT47A1Q5JQC4 288 aaPredicted RBP16.56■□□□□ 0.24
SMTN-221ENST00000504335 FBXO3Q9UK99 471 aa16.56■□□□□ 0.24
SMTN-221ENST00000504335 ANKRD30BQ9BXX2 1392 aa16.56■□□□□ 0.24
SMTN-221ENST00000504335 MLECQ14165 292 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 TRERF1Q96PN7 1200 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 E9PCH4 1651 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 GCC2Q8IWJ2 1684 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 REC8O95072 547 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 ZNF521Q96K83 1311 aa16.55■□□□□ 0.24
SMTN-221ENST00000504335 NUCB2P80303 420 aa16.54■□□□□ 0.24
SMTN-221ENST00000504335 MCTP1Q6DN14 999 aa16.54■□□□□ 0.24
SMTN-221ENST00000504335 TMED8Q6PL24 325 aaPredicted RBP16.54■□□□□ 0.24
SMTN-221ENST00000504335 K7ELQ4 463 aaPredicted RBP16.54■□□□□ 0.24
SMTN-221ENST00000504335 TICAM2Q86XR7 235 aa16.54■□□□□ 0.24
SMTN-221ENST00000504335 FAM53CQ9NYF3 392 aa16.53■□□□□ 0.24
SMTN-221ENST00000504335 PCF11O94913 1555 aaKnown RBP16.53■□□□□ 0.24
SMTN-221ENST00000504335 CASQ1P31415 396 aa16.53■□□□□ 0.24
SMTN-221ENST00000504335 SLFN5Q08AF3 891 aa16.53■□□□□ 0.24
SMTN-221ENST00000504335 BIVM-ERCC5R4GMW8 1640 aa16.52■□□□□ 0.24
SMTN-221ENST00000504335 MUM1L1Q5H9M0 696 aa16.52■□□□□ 0.24
SMTN-221ENST00000504335 KIF27Q86VH2 1401 aa16.52■□□□□ 0.24
SMTN-221ENST00000504335 NKTRP30414 1462 aaKnown RBP16.52■□□□□ 0.24
SMTN-221ENST00000504335 UVSSAQ2YD98 709 aa16.52■□□□□ 0.23
SMTN-221ENST00000504335 PLEKHH1Q9ULM0 1364 aa16.52■□□□□ 0.23
SMTN-221ENST00000504335 EP400NLQ6ZTU2 488 aa16.51■□□□□ 0.23
SMTN-221ENST00000504335 TRMT2AQ8IZ69 625 aaKnown RBP16.51■□□□□ 0.23
SMTN-221ENST00000504335 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
SMTN-221ENST00000504335 KIF1CO43896 1103 aaKnown RBP16.5■□□□□ 0.23
SMTN-221ENST00000504335 FYCO1Q9BQS8 1478 aa16.5■□□□□ 0.23
SMTN-221ENST00000504335 TPM3P06753 285 aa16.5■□□□□ 0.23
SMTN-221ENST00000504335 FAM184AQ8NB25 1140 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms