RNA–Protein interactions for RNA: ENST00000504095.1

KDM3B-202, Transcript of lysine demethylase 3B, humanhuman

TSL 3

Gene KDM3B, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM3B-202ENST00000504095 CNTLNQ9NXG0 1405 aa12.71□□□□□ -0.37
KDM3B-202ENST00000504095 ZC3H13Q5T200 1668 aaKnown RBP12.71□□□□□ -0.37
KDM3B-202ENST00000504095 FAM135AQ9P2D6 1515 aa12.71□□□□□ -0.38
KDM3B-202ENST00000504095 NAIPQ13075 1403 aa12.71□□□□□ -0.38
KDM3B-202ENST00000504095 CFAP65Q6ZU64 1925 aaKnown RBP12.7□□□□□ -0.38
KDM3B-202ENST00000504095 UNC13BO14795 1591 aa12.7□□□□□ -0.38
KDM3B-202ENST00000504095 ESF1Q9H501 851 aaKnown RBP12.7□□□□□ -0.38
KDM3B-202ENST00000504095 ABCC3O15438 1527 aa12.7□□□□□ -0.38
KDM3B-202ENST00000504095 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
KDM3B-202ENST00000504095 VWDEQ8N2E2 1590 aa12.69□□□□□ -0.38
KDM3B-202ENST00000504095 SETD1BQ9UPS6 1966 aaKnown RBP12.69□□□□□ -0.38
KDM3B-202ENST00000504095 ERBB3P21860 1342 aa12.68□□□□□ -0.38
KDM3B-202ENST00000504095 CEBPAP49715 358 aaPredicted RBP12.68□□□□□ -0.38
KDM3B-202ENST00000504095 CAMSAP1Q5T5Y3 1602 aa12.68□□□□□ -0.38
KDM3B-202ENST00000504095 ZMYM3Q14202 1370 aa12.68□□□□□ -0.38
KDM3B-202ENST00000504095 WASHC2CQ9Y4E1 1318 aa12.67□□□□□ -0.38
KDM3B-202ENST00000504095 SPNS2Q8IVW8 549 aa12.67□□□□□ -0.38
KDM3B-202ENST00000504095 KRTAP3-3Q9BYR6 98 aa12.65□□□□□ -0.38
KDM3B-202ENST00000504095 KRTAP3-2Q9BYR7 98 aa12.65□□□□□ -0.38
KDM3B-202ENST00000504095 KANK1Q14678 1352 aa12.65□□□□□ -0.38
KDM3B-202ENST00000504095 IQGAP3Q86VI3 1631 aa12.65□□□□□ -0.38
KDM3B-202ENST00000504095 LMTK2Q8IWU2 1503 aa12.64□□□□□ -0.39
KDM3B-202ENST00000504095 PZPP20742 1482 aa12.64□□□□□ -0.39
KDM3B-202ENST00000504095 TET3O43151 1660 aa12.63□□□□□ -0.39
KDM3B-202ENST00000504095 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
KDM3B-202ENST00000504095 MMRN1Q13201 1228 aa12.62□□□□□ -0.39
KDM3B-202ENST00000504095 VARS2Q5ST30 1063 aaKnown RBP12.62□□□□□ -0.39
KDM3B-202ENST00000504095 EFCAB6Q5THR3 1501 aa12.62□□□□□ -0.39
KDM3B-202ENST00000504095 C2orf72A6NCS6 295 aa12.61□□□□□ -0.39
KDM3B-202ENST00000504095 NPATQ14207 1427 aa12.61□□□□□ -0.39
KDM3B-202ENST00000504095 ARHGAP31Q2M1Z3 1444 aa12.61□□□□□ -0.39
KDM3B-202ENST00000504095 NUP155O75694 1391 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 PPP1R37O75864 691 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 ARSIQ5FYB1 569 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 FBXO31Q5XUX0 539 aaPredicted RBP12.6□□□□□ -0.39
KDM3B-202ENST00000504095 GPR153Q6NV75 609 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 ZSWIM6Q9HCJ5 1215 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 SETD5Q9C0A6 1442 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 E9PCH4 1651 aa12.6□□□□□ -0.39
KDM3B-202ENST00000504095 MYO3AQ8NEV4 1616 aa12.59□□□□□ -0.39
KDM3B-202ENST00000504095 SPATA31D1Q6ZQQ2 1576 aa12.59□□□□□ -0.39
KDM3B-202ENST00000504095 ERVK-7P63135 1459 aa12.59□□□□□ -0.39
KDM3B-202ENST00000504095 KHSRPQ92945 711 aaKnown RBP eCLIP12.58□□□□□ -0.4
KDM3B-202ENST00000504095 LMTK3Q96Q04 1460 aa12.58□□□□□ -0.4
KDM3B-202ENST00000504095 RAB3GAP2Q9H2M9 1393 aa12.57□□□□□ -0.4
KDM3B-202ENST00000504095 CHGAP10645 457 aaKnown RBP12.57□□□□□ -0.4
KDM3B-202ENST00000504095 ZNF142P52746 1687 aaPredicted RBP12.57□□□□□ -0.4
KDM3B-202ENST00000504095 TNRQ92752 1358 aa12.56□□□□□ -0.4
KDM3B-202ENST00000504095 HS6ST3Q8IZP7 471 aa12.56□□□□□ -0.4
KDM3B-202ENST00000504095 TRIM52Q96A61 297 aa12.56□□□□□ -0.4
KDM3B-202ENST00000504095 UHRF1BP1Q6BDS2 1440 aa12.55□□□□□ -0.4
KDM3B-202ENST00000504095 RPRD2Q5VT52 1461 aaKnown RBP12.55□□□□□ -0.4
KDM3B-202ENST00000504095 KIF3CO14782 793 aa12.55□□□□□ -0.4
KDM3B-202ENST00000504095 TRIM26Q12899 539 aaPredicted RBP12.55□□□□□ -0.4
KDM3B-202ENST00000504095 SYNMO15061 1565 aa12.55□□□□□ -0.4
KDM3B-202ENST00000504095 TMC2Q8TDI7 906 aa12.54□□□□□ -0.4
KDM3B-202ENST00000504095 CEP170BQ9Y4F5 1589 aaPredicted RBP12.54□□□□□ -0.4
KDM3B-202ENST00000504095 SPHKAPQ2M3C7 1700 aa12.54□□□□□ -0.4
KDM3B-202ENST00000504095 NOS1P29475 1434 aa12.54□□□□□ -0.4
KDM3B-202ENST00000504095 A2ML1A8K2U0 1454 aa12.52□□□□□ -0.41
KDM3B-202ENST00000504095 NLRP1Q9C000 1473 aa12.52□□□□□ -0.41
KDM3B-202ENST00000504095 HRCP23327 699 aa12.5□□□□□ -0.41
KDM3B-202ENST00000504095 HSPA2P54652 639 aa12.5□□□□□ -0.41
KDM3B-202ENST00000504095 PIK3C2BO00750 1634 aa12.5□□□□□ -0.41
KDM3B-202ENST00000504095 UBR1Q8IWV7 1749 aa12.5□□□□□ -0.41
KDM3B-202ENST00000504095 MYO5BQ9ULV0 1848 aa12.5□□□□□ -0.41
KDM3B-202ENST00000504095 UGGT1Q9NYU2 1555 aa12.49□□□□□ -0.41
KDM3B-202ENST00000504095 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
KDM3B-202ENST00000504095 STRCQ7RTU9 1775 aa12.48□□□□□ -0.41
KDM3B-202ENST00000504095 PTPRTO14522 1441 aa12.48□□□□□ -0.41
KDM3B-202ENST00000504095 MPHOSPH9Q99550 1183 aa12.48□□□□□ -0.41
KDM3B-202ENST00000504095 NUDT7P0C024 238 aa12.47□□□□□ -0.41
KDM3B-202ENST00000504095 IDI1Q13907 227 aa12.47□□□□□ -0.41
KDM3B-202ENST00000504095 KDM5AP29375 1690 aaKnown RBP12.47□□□□□ -0.41
KDM3B-202ENST00000504095 TRPM2O94759 1503 aa12.47□□□□□ -0.41
KDM3B-202ENST00000504095 ZNF687Q8N1G0 1237 aa12.46□□□□□ -0.41
KDM3B-202ENST00000504095 CLTCL1P53675 1640 aa12.46□□□□□ -0.41
KDM3B-202ENST00000504095 PLA2R1Q13018 1463 aa12.46□□□□□ -0.42
KDM3B-202ENST00000504095 ZNF316A6NFI3 1004 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-202ENST00000504095 SLC52A1Q9NWF4 448 aa12.45□□□□□ -0.42
KDM3B-202ENST00000504095 ADGRB3O60242 1522 aa12.45□□□□□ -0.42
KDM3B-202ENST00000504095 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
KDM3B-202ENST00000504095 TMEM131LA2VDJ0 1609 aa12.44□□□□□ -0.42
KDM3B-202ENST00000504095 KIF1BO60333 1816 aa12.44□□□□□ -0.42
KDM3B-202ENST00000504095 PCDHGA4Q9Y5G9 962 aa12.43□□□□□ -0.42
KDM3B-202ENST00000504095 NKX1-1Q15270 411 aaPredicted RBP12.42□□□□□ -0.42
KDM3B-202ENST00000504095 THEMISQ8N1K5 641 aaPredicted RBP12.42□□□□□ -0.42
KDM3B-202ENST00000504095 SLIT1O75093 1534 aa12.41□□□□□ -0.42
KDM3B-202ENST00000504095 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
KDM3B-202ENST00000504095 PCGF6Q9BYE7 350 aa12.4□□□□□ -0.42
KDM3B-202ENST00000504095 NCKAP5LQ9HCH0 1330 aa12.39□□□□□ -0.43
KDM3B-202ENST00000504095 NEURL4Q96JN8 1562 aa12.39□□□□□ -0.43
KDM3B-202ENST00000504095 SLC34A2O95436 690 aa12.38□□□□□ -0.43
KDM3B-202ENST00000504095 LHX6Q9UPM6 363 aa12.38□□□□□ -0.43
KDM3B-202ENST00000504095 TMEM2Q9UHN6 1383 aa12.38□□□□□ -0.43
KDM3B-202ENST00000504095 ANKRD30BQ9BXX2 1392 aa12.37□□□□□ -0.43
KDM3B-202ENST00000504095 CCDC144AA2RUR9 1427 aa12.37□□□□□ -0.43
KDM3B-202ENST00000504095 IQGAP1P46940 1657 aa12.36□□□□□ -0.43
KDM3B-202ENST00000504095 SCAF11Q99590 1463 aaKnown RBP12.36□□□□□ -0.43
KDM3B-202ENST00000504095 LTKP29376 864 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms