RNA–Protein interactions for RNA: ENST00000503884.5

PROM1-204, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 622 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-204ENST00000503884 ORAI2Q96SN7 254 aa13.55□□□□□ -0.24
PROM1-204ENST00000503884 TECPR2O15040 1411 aa13.55□□□□□ -0.24
PROM1-204ENST00000503884 KNDC1Q76NI1 1749 aa13.54□□□□□ -0.24
PROM1-204ENST00000503884 ADGRF5Q8IZF2 1346 aa13.53□□□□□ -0.24
PROM1-204ENST00000503884 RGS12O14924 1447 aa13.53□□□□□ -0.24
PROM1-204ENST00000503884 CCDC144AA2RUR9 1427 aa13.52□□□□□ -0.25
PROM1-204ENST00000503884 PXDNQ92626 1479 aa13.51□□□□□ -0.25
PROM1-204ENST00000503884 RBM6P78332 1123 aaKnown RBP13.51□□□□□ -0.25
PROM1-204ENST00000503884 C8orf37Q96NL8 207 aa13.51□□□□□ -0.25
PROM1-204ENST00000503884 MARF1Q9Y4F3 1742 aaKnown RBP13.5□□□□□ -0.25
PROM1-204ENST00000503884 PIK3C2GO75747 1445 aa13.5□□□□□ -0.25
PROM1-204ENST00000503884 LRPPRCP42704 1394 aaKnown RBP13.5□□□□□ -0.25
PROM1-204ENST00000503884 ABCC11Q96J66 1382 aa13.5□□□□□ -0.25
PROM1-204ENST00000503884 ANKRD30BQ9BXX2 1392 aa13.5□□□□□ -0.25
PROM1-204ENST00000503884 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
PROM1-204ENST00000503884 QTRT2Q9H974 415 aaKnown RBP13.5□□□□□ -0.25
PROM1-204ENST00000503884 MYOM2P54296 1465 aa13.49□□□□□ -0.25
PROM1-204ENST00000503884 MPHOSPH9Q99550 1183 aa13.49□□□□□ -0.25
PROM1-204ENST00000503884 FMN2Q9NZ56 1722 aa13.49□□□□□ -0.25
PROM1-204ENST00000503884 FNBP4Q8N3X1 1017 aaPredicted RBP13.48□□□□□ -0.25
PROM1-204ENST00000503884 NPHP3Q7Z494 1330 aa13.47□□□□□ -0.25
PROM1-204ENST00000503884 ADAMTS2O95450 1211 aa13.47□□□□□ -0.25
PROM1-204ENST00000503884 NGLY1Q96IV0 654 aa13.47□□□□□ -0.25
PROM1-204ENST00000503884 NRXN1Q9ULB1 1477 aa13.47□□□□□ -0.25
PROM1-204ENST00000503884 EP400Q96L91 3159 aa13.46□□□□□ -0.25
PROM1-204ENST00000503884 PLEKHH1Q9ULM0 1364 aa13.46□□□□□ -0.25
PROM1-204ENST00000503884 RGL3Q3MIN7 710 aa13.46□□□□□ -0.25
PROM1-204ENST00000503884 WAPLQ7Z5K2 1190 aa13.46□□□□□ -0.25
PROM1-204ENST00000503884 ATRNO75882 1429 aa13.46□□□□□ -0.26
PROM1-204ENST00000503884 KIF1AQ12756 1690 aa13.45□□□□□ -0.26
PROM1-204ENST00000503884 ESCO1Q5FWF5 840 aa13.45□□□□□ -0.26
PROM1-204ENST00000503884 YTHDC2Q9H6S0 1430 aaKnown RBP13.45□□□□□ -0.26
PROM1-204ENST00000503884 RGPD8O14715 1765 aaPredicted RBP13.45□□□□□ -0.26
PROM1-204ENST00000503884 BCL9LQ86UU0 1499 aa13.44□□□□□ -0.26
PROM1-204ENST00000503884 TMEM132EQ6IEE7 984 aa13.44□□□□□ -0.26
PROM1-204ENST00000503884 SIRT1Q96EB6 747 aa13.44□□□□□ -0.26
PROM1-204ENST00000503884 USP21Q9UK80 565 aa13.44□□□□□ -0.26
PROM1-204ENST00000503884 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.44□□□□□ -0.26
PROM1-204ENST00000503884 FOXO3O43524 673 aa13.43□□□□□ -0.26
PROM1-204ENST00000503884 C14orf93Q9H972 538 aaKnown RBP13.43□□□□□ -0.26
PROM1-204ENST00000503884 STK26Q9P289 416 aa13.43□□□□□ -0.26
PROM1-204ENST00000503884 TRPC5Q9UL62 973 aaPredicted RBP13.43□□□□□ -0.26
PROM1-204ENST00000503884 SRCAPQ6ZRS2 3230 aa13.42□□□□□ -0.26
PROM1-204ENST00000503884 ACIN1Q9UKV3 1341 aaKnown RBP13.41□□□□□ -0.26
PROM1-204ENST00000503884 XPCQ01831 940 aaPredicted RBP13.4□□□□□ -0.26
PROM1-204ENST00000503884 SPATA31A3Q5VYP0 1347 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 SLIT2O94813 1529 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 NUTM2FA1L443 756 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 ATAD2Q6PL18 1390 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 USP32Q8NFA0 1604 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 DLC1Q96QB1 1528 aa13.39□□□□□ -0.27
PROM1-204ENST00000503884 CFAP70Q5T0N1 1121 aa13.38□□□□□ -0.27
PROM1-204ENST00000503884 CNKSR2Q8WXI2 1034 aa13.38□□□□□ -0.27
PROM1-204ENST00000503884 ABCA3Q99758 1704 aa13.38□□□□□ -0.27
PROM1-204ENST00000503884 ADGRB1O14514 1584 aa13.37□□□□□ -0.27
PROM1-204ENST00000503884 ADGRB2O60241 1585 aa13.37□□□□□ -0.27
PROM1-204ENST00000503884 GLI3P10071 1580 aa13.37□□□□□ -0.27
PROM1-204ENST00000503884 DHX57Q6P158 1386 aaKnown RBP13.37□□□□□ -0.27
PROM1-204ENST00000503884 KRT28Q7Z3Y7 464 aa13.35□□□□□ -0.27
PROM1-204ENST00000503884 GJD4Q96KN9 370 aaPredicted RBP13.35□□□□□ -0.27
PROM1-204ENST00000503884 TNS3Q68CZ2 1445 aa13.35□□□□□ -0.27
PROM1-204ENST00000503884 NWD2Q9ULI1 1742 aa13.35□□□□□ -0.27
PROM1-204ENST00000503884 BRWD3Q6RI45 1802 aa13.34□□□□□ -0.27
PROM1-204ENST00000503884 SBNO1A3KN83 1393 aa13.34□□□□□ -0.27
PROM1-204ENST00000503884 RAB3GAP2Q9H2M9 1393 aa13.34□□□□□ -0.27
PROM1-204ENST00000503884 TRPM3Q9HCF6 1732 aaPredicted RBP13.34□□□□□ -0.27
PROM1-204ENST00000503884 PHF8Q9UPP1 1060 aa13.34□□□□□ -0.27
PROM1-204ENST00000503884 PLCH1Q4KWH8 1693 aa13.34□□□□□ -0.27
PROM1-204ENST00000503884 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
PROM1-204ENST00000503884 UNC5CLQ8IV45 518 aa13.33□□□□□ -0.28
PROM1-204ENST00000503884 PRAM1Q96QH2 718 aa13.33□□□□□ -0.28
PROM1-204ENST00000503884 RALGAPBQ86X10 1494 aa13.33□□□□□ -0.28
PROM1-204ENST00000503884 KCNA4P22459 653 aa13.32□□□□□ -0.28
PROM1-204ENST00000503884 NCBP3Q53F19 620 aaKnown RBP13.32□□□□□ -0.28
PROM1-204ENST00000503884 ALS2Q96Q42 1657 aa13.31□□□□□ -0.28
PROM1-204ENST00000503884 PSME1Q06323 249 aa13.3□□□□□ -0.28
PROM1-204ENST00000503884 CCDC125Q86Z20 511 aa13.3□□□□□ -0.28
PROM1-204ENST00000503884 NRAPQ86VF7 1730 aa13.3□□□□□ -0.28
PROM1-204ENST00000503884 CRYBG1Q9Y4K1 1723 aa13.3□□□□□ -0.28
PROM1-204ENST00000503884 ONECUT3O60422 494 aaPredicted RBP13.29□□□□□ -0.28
PROM1-204ENST00000503884 ARHGEF10O15013 1369 aa13.29□□□□□ -0.28
PROM1-204ENST00000503884 SAFB2Q14151 953 aaKnown RBP eCLIP13.28□□□□□ -0.28
PROM1-204ENST00000503884 VPS72Q15906 364 aa13.28□□□□□ -0.28
PROM1-204ENST00000503884 CABLES1Q8TDN4 633 aa13.28□□□□□ -0.28
PROM1-204ENST00000503884 PRR36Q9H6K5 1346 aa13.28□□□□□ -0.28
PROM1-204ENST00000503884 TULP4Q9NRJ4 1543 aa13.28□□□□□ -0.28
PROM1-204ENST00000503884 ARHGEF28Q8N1W1 1705 aaKnown RBP13.27□□□□□ -0.28
PROM1-204ENST00000503884 HRCP23327 699 aa13.27□□□□□ -0.29
PROM1-204ENST00000503884 BLMP54132 1417 aaPredicted RBP13.26□□□□□ -0.29
PROM1-204ENST00000503884 PMFBP1Q8TBY8 1022 aa13.26□□□□□ -0.29
PROM1-204ENST00000503884 STAC3Q96MF2 364 aa13.26□□□□□ -0.29
PROM1-204ENST00000503884 POGKQ9P215 609 aa13.26□□□□□ -0.29
PROM1-204ENST00000503884 FAM83GA6ND36 823 aa13.25□□□□□ -0.29
PROM1-204ENST00000503884 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
PROM1-204ENST00000503884 COL14A1Q05707 1796 aaKnown RBP13.25□□□□□ -0.29
PROM1-204ENST00000503884 EIF3AQ14152 1382 aaKnown RBP13.24□□□□□ -0.29
PROM1-204ENST00000503884 WASLO00401 505 aaPredicted RBP13.24□□□□□ -0.29
PROM1-204ENST00000503884 SEPT12Q8IYM1 358 aa13.24□□□□□ -0.29
PROM1-204ENST00000503884 HIRIP3Q9BW71 556 aaPredicted RBP13.24□□□□□ -0.29
PROM1-204ENST00000503884 ITSN1Q15811 1721 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms