RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 PRAM1Q96QH2 718 aa26.21■■□□□ 1.79
PDLIM7-209ENST00000503346 ROBO1Q9Y6N7 1651 aa26.21■■□□□ 1.79
PDLIM7-209ENST00000503346 NBPF1Q3BBV0 1214 aa26.2■■□□□ 1.78
PDLIM7-209ENST00000503346 CDC42BPGQ6DT37 1551 aa26.19■■□□□ 1.78
PDLIM7-209ENST00000503346 BRINP3Q76B58 766 aa26.17■■□□□ 1.78
PDLIM7-209ENST00000503346 POGKQ9P215 609 aa26.17■■□□□ 1.78
PDLIM7-209ENST00000503346 C1orf167Q5SNV9 1468 aa26.16■■□□□ 1.78
PDLIM7-209ENST00000503346 SAFB2Q14151 953 aaKnown RBP eCLIP26.13■■□□□ 1.77
PDLIM7-209ENST00000503346 NBPF8Q3BBV2 869 aa26.13■■□□□ 1.77
PDLIM7-209ENST00000503346 TRPM1Q7Z4N2 1603 aa26.1■■□□□ 1.77
PDLIM7-209ENST00000503346 AHDC1Q5TGY3 1603 aaPredicted RBP26.08■■□□□ 1.77
PDLIM7-209ENST00000503346 ARHGEF28Q8N1W1 1705 aaKnown RBP26.08■■□□□ 1.76
PDLIM7-209ENST00000503346 ROCK2O75116 1388 aaKnown RBP26.07■■□□□ 1.76
PDLIM7-209ENST00000503346 CCER1Q8TC90 406 aaPredicted RBP26.07■■□□□ 1.76
PDLIM7-209ENST00000503346 ADGRB2O60241 1585 aa26.07■■□□□ 1.76
PDLIM7-209ENST00000503346 GPRASP1Q5JY77 1395 aa26.07■■□□□ 1.76
PDLIM7-209ENST00000503346 ORAI2Q96SN7 254 aa26.06■■□□□ 1.76
PDLIM7-209ENST00000503346 TIMELESSQ9UNS1 1208 aa26.06■■□□□ 1.76
PDLIM7-209ENST00000503346 MINK1Q8N4C8 1332 aaPredicted RBP26.05■■□□□ 1.76
PDLIM7-209ENST00000503346 HIRIP3Q9BW71 556 aaPredicted RBP26.03■■□□□ 1.76
PDLIM7-209ENST00000503346 RALGAPBQ86X10 1494 aa26.03■■□□□ 1.76
PDLIM7-209ENST00000503346 FMN2Q9NZ56 1722 aa26.02■■□□□ 1.76
PDLIM7-209ENST00000503346 NUTM2FA1L443 756 aa26.02■■□□□ 1.76
PDLIM7-209ENST00000503346 ESCO1Q5FWF5 840 aa26.02■■□□□ 1.76
PDLIM7-209ENST00000503346 PHLPP1O60346 1717 aa26.02■■□□□ 1.76
PDLIM7-209ENST00000503346 COL16A1Q07092 1604 aaPredicted RBP26.01■■□□□ 1.75
PDLIM7-209ENST00000503346 CENPJQ9HC77 1338 aaPredicted RBP26■■□□□ 1.75
PDLIM7-209ENST00000503346 WASLO00401 505 aaPredicted RBP26■■□□□ 1.75
PDLIM7-209ENST00000503346 NHSL1Q5SYE7 1610 aa25.99■■□□□ 1.75
PDLIM7-209ENST00000503346 ANKARQ7Z5J8 1434 aa25.99■■□□□ 1.75
PDLIM7-209ENST00000503346 EIF3AQ14152 1382 aaKnown RBP25.99■■□□□ 1.75
PDLIM7-209ENST00000503346 DDX17Q92841 729 aaKnown RBP25.98■■□□□ 1.75
PDLIM7-209ENST00000503346 JCADQ9P266 1359 aa25.97■■□□□ 1.75
PDLIM7-209ENST00000503346 CARD11Q9BXL7 1154 aa25.96■■□□□ 1.75
PDLIM7-209ENST00000503346 SOS2Q07890 1332 aaPredicted RBP25.95■■□□□ 1.75
PDLIM7-209ENST00000503346 TULP4Q9NRJ4 1543 aa25.95■■□□□ 1.74
PDLIM7-209ENST00000503346 NPHP3Q7Z494 1330 aa25.94■■□□□ 1.74
PDLIM7-209ENST00000503346 PRR36Q9H6K5 1346 aa25.92■■□□□ 1.74
PDLIM7-209ENST00000503346 LRRC59Q96AG4 307 aaKnown RBP25.92■■□□□ 1.74
PDLIM7-209ENST00000503346 PHF8Q9UPP1 1060 aa25.92■■□□□ 1.74
PDLIM7-209ENST00000503346 FOXO3O43524 673 aa25.91■■□□□ 1.74
PDLIM7-209ENST00000503346 CDK19Q9BWU1 502 aa25.91■■□□□ 1.74
PDLIM7-209ENST00000503346 USP32Q8NFA0 1604 aa25.91■■□□□ 1.74
PDLIM7-209ENST00000503346 KIF1AQ12756 1690 aa25.9■■□□□ 1.74
PDLIM7-209ENST00000503346 MED1Q15648 1581 aaPredicted RBP25.88■■□□□ 1.73
PDLIM7-209ENST00000503346 PXDNQ92626 1479 aa25.88■■□□□ 1.73
PDLIM7-209ENST00000503346 ATP7BP35670 1465 aa25.87■■□□□ 1.73
PDLIM7-209ENST00000503346 NUDT16Q96DE0 195 aaKnown RBP25.87■■□□□ 1.73
PDLIM7-209ENST00000503346 SPATA31A6Q5VVP1 1343 aa25.87■■□□□ 1.73
PDLIM7-209ENST00000503346 QRICH2Q9H0J4 1663 aa25.87■■□□□ 1.73
PDLIM7-209ENST00000503346 PNPLA6Q8IY17 1366 aa25.84■■□□□ 1.73
PDLIM7-209ENST00000503346 SBNO2Q9Y2G9 1366 aa25.84■■□□□ 1.73
PDLIM7-209ENST00000503346 SHPRHQ149N8 1683 aa25.84■■□□□ 1.73
PDLIM7-209ENST00000503346 RGPD8O14715 1765 aaPredicted RBP25.83■■□□□ 1.73
PDLIM7-209ENST00000503346 XPCQ01831 940 aaPredicted RBP25.83■■□□□ 1.73
PDLIM7-209ENST00000503346 PMFBP1Q8TBY8 1022 aa25.83■■□□□ 1.73
PDLIM7-209ENST00000503346 CCDC61Q9Y6R9 512 aa25.82■■□□□ 1.72
PDLIM7-209ENST00000503346 EVC2Q86UK5 1308 aa25.82■■□□□ 1.72
PDLIM7-209ENST00000503346 DISP3Q9P2K9 1392 aa25.82■■□□□ 1.72
PDLIM7-209ENST00000503346 SRPK2P78362 688 aaKnown RBP25.81■■□□□ 1.72
PDLIM7-209ENST00000503346 KRT28Q7Z3Y7 464 aa25.81■■□□□ 1.72
PDLIM7-209ENST00000503346 CABP2Q9NPB3 220 aa25.8■■□□□ 1.72
PDLIM7-209ENST00000503346 PSME1Q06323 249 aa25.79■■□□□ 1.72
PDLIM7-209ENST00000503346 PLEKHG3A1L390 1219 aa25.77■■□□□ 1.72
PDLIM7-209ENST00000503346 SPATA31A3Q5VYP0 1347 aa25.77■■□□□ 1.72
PDLIM7-209ENST00000503346 SBNO1A3KN83 1393 aa25.77■■□□□ 1.72
PDLIM7-209ENST00000503346 NGDNQ8NEJ9 315 aaKnown RBP25.76■■□□□ 1.71
PDLIM7-209ENST00000503346 LRP6O75581 1613 aa25.76■■□□□ 1.71
PDLIM7-209ENST00000503346 ITSN1Q15811 1721 aa25.75■■□□□ 1.71
PDLIM7-209ENST00000503346 TOPAZ1Q8N9V7 1692 aa25.75■■□□□ 1.71
PDLIM7-209ENST00000503346 POLR3AO14802 1390 aaPredicted RBP25.74■■□□□ 1.71
PDLIM7-209ENST00000503346 USP47Q96K76 1375 aa25.74■■□□□ 1.71
PDLIM7-209ENST00000503346 ST20-MTHFSA0A0A6YYL1 179 aa25.74■■□□□ 1.71
PDLIM7-209ENST00000503346 TNS3Q68CZ2 1445 aa25.73■■□□□ 1.71
PDLIM7-209ENST00000503346 PPIP5K1Q6PFW1 1433 aa25.72■■□□□ 1.71
PDLIM7-209ENST00000503346 TESK2Q96S53 571 aa25.72■■□□□ 1.71
PDLIM7-209ENST00000503346 PHF23Q9BUL5 403 aaPredicted RBP25.72■■□□□ 1.71
PDLIM7-209ENST00000503346 COL22A1Q8NFW1 1626 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-209ENST00000503346 ACEP12821 1306 aa25.71■■□□□ 1.71
PDLIM7-209ENST00000503346 NUTM2BA6NNL0 878 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-209ENST00000503346 NUTM2EB1AL46 878 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-209ENST00000503346 NUTM2AQ8IVF1 878 aaPredicted RBP25.71■■□□□ 1.71
PDLIM7-209ENST00000503346 SLC24A1O60721 1099 aa25.7■■□□□ 1.7
PDLIM7-209ENST00000503346 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
PDLIM7-209ENST00000503346 CABP1Q9NZU7 370 aa25.69■■□□□ 1.7
PDLIM7-209ENST00000503346 ARHGEF10O15013 1369 aa25.68■■□□□ 1.7
PDLIM7-209ENST00000503346 MEX3CQ5U5Q3 659 aaKnown RBP25.67■■□□□ 1.7
PDLIM7-209ENST00000503346 PUS7Q96PZ0 661 aaKnown RBP25.67■■□□□ 1.7
PDLIM7-209ENST00000503346 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
PDLIM7-209ENST00000503346 RGS17Q9UGC6 210 aaPredicted RBP25.65■■□□□ 1.7
PDLIM7-209ENST00000503346 LMOD2Q6P5Q4 547 aa25.62■■□□□ 1.69
PDLIM7-209ENST00000503346 BRD4O60885 1362 aaPredicted RBP25.61■■□□□ 1.69
PDLIM7-209ENST00000503346 PAK3O75914 559 aaPredicted RBP25.61■■□□□ 1.69
PDLIM7-209ENST00000503346 ADAMTS2O95450 1211 aa25.61■■□□□ 1.69
PDLIM7-209ENST00000503346 ALS2Q96Q42 1657 aa25.59■■□□□ 1.69
PDLIM7-209ENST00000503346 TMF1P82094 1093 aa25.59■■□□□ 1.69
PDLIM7-209ENST00000503346 USP6P35125 1406 aa25.59■■□□□ 1.69
PDLIM7-209ENST00000503346 ZNF692Q9BU19 519 aaPredicted RBP25.58■■□□□ 1.69
PDLIM7-209ENST00000503346 C8orf37Q96NL8 207 aa25.57■■□□□ 1.68
PDLIM7-209ENST00000503346 CPSF1Q10570 1443 aaKnown RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 133.4 ms