RNA–Protein interactions for RNA: ENST00000503324.1

SMAD1-204, Transcript of SMAD family member 1, humanhuman

TSL 4

Gene SMAD1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-204ENST00000503324 PRAM1Q96QH2 718 aa25.45■■□□□ 1.66
SMAD1-204ENST00000503324 SCAF1Q9H7N4 1312 aaKnown RBP25.44■■□□□ 1.66
SMAD1-204ENST00000503324 SLAIN2Q9P270 581 aa25.44■■□□□ 1.66
SMAD1-204ENST00000503324 ARHGEF28Q8N1W1 1705 aaKnown RBP25.43■■□□□ 1.66
SMAD1-204ENST00000503324 MST1RQ04912 1400 aa25.43■■□□□ 1.66
SMAD1-204ENST00000503324 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
SMAD1-204ENST00000503324 TIMELESSQ9UNS1 1208 aa25.41■■□□□ 1.66
SMAD1-204ENST00000503324 GPRASP1Q5JY77 1395 aa25.4■■□□□ 1.66
SMAD1-204ENST00000503324 ROBO1Q9Y6N7 1651 aa25.39■■□□□ 1.66
SMAD1-204ENST00000503324 POGKQ9P215 609 aa25.39■■□□□ 1.66
SMAD1-204ENST00000503324 ROCK2O75116 1388 aaKnown RBP25.39■■□□□ 1.65
SMAD1-204ENST00000503324 RALGAPBQ86X10 1494 aa25.39■■□□□ 1.65
SMAD1-204ENST00000503324 SAFB2Q14151 953 aaKnown RBP eCLIP25.38■■□□□ 1.65
SMAD1-204ENST00000503324 ADGRB2O60241 1585 aa25.35■■□□□ 1.65
SMAD1-204ENST00000503324 C1orf167Q5SNV9 1468 aa25.35■■□□□ 1.65
SMAD1-204ENST00000503324 HSPA1LP34931 641 aa25.34■■□□□ 1.65
SMAD1-204ENST00000503324 FMN2Q9NZ56 1722 aa25.32■■□□□ 1.64
SMAD1-204ENST00000503324 BRINP3Q76B58 766 aa25.32■■□□□ 1.64
SMAD1-204ENST00000503324 MINK1Q8N4C8 1332 aaPredicted RBP25.31■■□□□ 1.64
SMAD1-204ENST00000503324 HIRIP3Q9BW71 556 aaPredicted RBP25.29■■□□□ 1.64
SMAD1-204ENST00000503324 CARD11Q9BXL7 1154 aa25.27■■□□□ 1.64
SMAD1-204ENST00000503324 CENPJQ9HC77 1338 aaPredicted RBP25.27■■□□□ 1.64
SMAD1-204ENST00000503324 NUTM2FA1L443 756 aa25.25■■□□□ 1.63
SMAD1-204ENST00000503324 ORAI2Q96SN7 254 aa25.25■■□□□ 1.63
SMAD1-204ENST00000503324 AHDC1Q5TGY3 1603 aaPredicted RBP25.25■■□□□ 1.63
SMAD1-204ENST00000503324 QRICH2Q9H0J4 1663 aa25.24■■□□□ 1.63
SMAD1-204ENST00000503324 WASLO00401 505 aaPredicted RBP25.24■■□□□ 1.63
SMAD1-204ENST00000503324 USP32Q8NFA0 1604 aa25.23■■□□□ 1.63
SMAD1-204ENST00000503324 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
SMAD1-204ENST00000503324 NHSL1Q5SYE7 1610 aa25.22■■□□□ 1.63
SMAD1-204ENST00000503324 ANKARQ7Z5J8 1434 aa25.21■■□□□ 1.63
SMAD1-204ENST00000503324 PHLPP1O60346 1717 aa25.21■■□□□ 1.63
SMAD1-204ENST00000503324 TULP4Q9NRJ4 1543 aa25.21■■□□□ 1.63
SMAD1-204ENST00000503324 COL16A1Q07092 1604 aaPredicted RBP25.2■■□□□ 1.62
SMAD1-204ENST00000503324 ESCO1Q5FWF5 840 aa25.2■■□□□ 1.62
SMAD1-204ENST00000503324 PRR36Q9H6K5 1346 aa25.19■■□□□ 1.62
SMAD1-204ENST00000503324 RGPD8O14715 1765 aaPredicted RBP25.18■■□□□ 1.62
SMAD1-204ENST00000503324 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
SMAD1-204ENST00000503324 CDK19Q9BWU1 502 aa25.17■■□□□ 1.62
SMAD1-204ENST00000503324 ATP7BP35670 1465 aa25.15■■□□□ 1.62
SMAD1-204ENST00000503324 SBNO2Q9Y2G9 1366 aa25.15■■□□□ 1.62
SMAD1-204ENST00000503324 KIF1AQ12756 1690 aa25.14■■□□□ 1.62
SMAD1-204ENST00000503324 PHF8Q9UPP1 1060 aa25.12■■□□□ 1.61
SMAD1-204ENST00000503324 SOS2Q07890 1332 aaPredicted RBP25.12■■□□□ 1.61
SMAD1-204ENST00000503324 NUDT16Q96DE0 195 aaKnown RBP25.11■■□□□ 1.61
SMAD1-204ENST00000503324 PXDNQ92626 1479 aa25.1■■□□□ 1.61
SMAD1-204ENST00000503324 USP47Q96K76 1375 aa25.1■■□□□ 1.61
SMAD1-204ENST00000503324 FOXO3O43524 673 aa25.1■■□□□ 1.61
SMAD1-204ENST00000503324 NPHP3Q7Z494 1330 aa25.1■■□□□ 1.61
SMAD1-204ENST00000503324 TOPAZ1Q8N9V7 1692 aa25.09■■□□□ 1.61
SMAD1-204ENST00000503324 ST20-MTHFSA0A0A6YYL1 179 aa25.08■■□□□ 1.61
SMAD1-204ENST00000503324 CABP2Q9NPB3 220 aa25.08■■□□□ 1.61
SMAD1-204ENST00000503324 EVC2Q86UK5 1308 aa25.08■■□□□ 1.6
SMAD1-204ENST00000503324 ITSN1Q15811 1721 aa25.07■■□□□ 1.6
SMAD1-204ENST00000503324 SRPK2P78362 688 aaKnown RBP25.07■■□□□ 1.6
SMAD1-204ENST00000503324 PMFBP1Q8TBY8 1022 aa25.07■■□□□ 1.6
SMAD1-204ENST00000503324 TESK2Q96S53 571 aa25.07■■□□□ 1.6
SMAD1-204ENST00000503324 JCADQ9P266 1359 aa25.06■■□□□ 1.6
SMAD1-204ENST00000503324 CCDC61Q9Y6R9 512 aa25.05■■□□□ 1.6
SMAD1-204ENST00000503324 XPCQ01831 940 aaPredicted RBP25.04■■□□□ 1.6
SMAD1-204ENST00000503324 LRRC59Q96AG4 307 aaKnown RBP25.04■■□□□ 1.6
SMAD1-204ENST00000503324 SHPRHQ149N8 1683 aa25.04■■□□□ 1.6
SMAD1-204ENST00000503324 PLEKHG3A1L390 1219 aa25.01■■□□□ 1.59
SMAD1-204ENST00000503324 KRT28Q7Z3Y7 464 aa25.01■■□□□ 1.59
SMAD1-204ENST00000503324 PNPLA6Q8IY17 1366 aa25■■□□□ 1.59
SMAD1-204ENST00000503324 PPIP5K1Q6PFW1 1433 aa25■■□□□ 1.59
SMAD1-204ENST00000503324 POLR3AO14802 1390 aaPredicted RBP24.99■■□□□ 1.59
SMAD1-204ENST00000503324 MED1Q15648 1581 aaPredicted RBP24.97■■□□□ 1.59
SMAD1-204ENST00000503324 PSME1Q06323 249 aa24.97■■□□□ 1.59
SMAD1-204ENST00000503324 NGDNQ8NEJ9 315 aaKnown RBP24.97■■□□□ 1.59
SMAD1-204ENST00000503324 ATAD2Q6PL18 1390 aa24.96■■□□□ 1.59
SMAD1-204ENST00000503324 ACEP12821 1306 aa24.96■■□□□ 1.59
SMAD1-204ENST00000503324 SPATA31A3Q5VYP0 1347 aa24.96■■□□□ 1.59
SMAD1-204ENST00000503324 TRPM3Q9HCF6 1732 aaPredicted RBP24.96■■□□□ 1.59
SMAD1-204ENST00000503324 SBNO1A3KN83 1393 aa24.95■■□□□ 1.59
SMAD1-204ENST00000503324 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
SMAD1-204ENST00000503324 CABP1Q9NZU7 370 aa24.95■■□□□ 1.58
SMAD1-204ENST00000503324 DISP3Q9P2K9 1392 aa24.94■■□□□ 1.58
SMAD1-204ENST00000503324 PUS7Q96PZ0 661 aaKnown RBP24.94■■□□□ 1.58
SMAD1-204ENST00000503324 TNS3Q68CZ2 1445 aa24.94■■□□□ 1.58
SMAD1-204ENST00000503324 LRP6O75581 1613 aa24.94■■□□□ 1.58
SMAD1-204ENST00000503324 COL22A1Q8NFW1 1626 aaPredicted RBP24.94■■□□□ 1.58
SMAD1-204ENST00000503324 SLC24A1O60721 1099 aa24.93■■□□□ 1.58
SMAD1-204ENST00000503324 EIF4G2P78344 907 aaKnown RBP eCLIP24.92■■□□□ 1.58
SMAD1-204ENST00000503324 HSPA5P11021 654 aaKnown RBP24.91■■□□□ 1.58
SMAD1-204ENST00000503324 TMF1P82094 1093 aa24.9■■□□□ 1.58
SMAD1-204ENST00000503324 ALS2Q96Q42 1657 aa24.89■■□□□ 1.58
SMAD1-204ENST00000503324 USP6P35125 1406 aa24.86■■□□□ 1.57
SMAD1-204ENST00000503324 CPSF1Q10570 1443 aaKnown RBP24.86■■□□□ 1.57
SMAD1-204ENST00000503324 CD163L1Q9NR16 1453 aa24.85■■□□□ 1.57
SMAD1-204ENST00000503324 ARHGEF10O15013 1369 aa24.85■■□□□ 1.57
SMAD1-204ENST00000503324 NUTM2BA6NNL0 878 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-204ENST00000503324 NUTM2EB1AL46 878 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-204ENST00000503324 NUTM2AQ8IVF1 878 aaPredicted RBP24.85■■□□□ 1.57
SMAD1-204ENST00000503324 AKAP12Q02952 1782 aa24.85■■□□□ 1.57
SMAD1-204ENST00000503324 SLC12A5Q9H2X9 1139 aa24.84■■□□□ 1.57
SMAD1-204ENST00000503324 SSH2Q76I76 1423 aa24.84■■□□□ 1.57
SMAD1-204ENST00000503324 BRD4O60885 1362 aaPredicted RBP24.82■■□□□ 1.56
SMAD1-204ENST00000503324 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
SMAD1-204ENST00000503324 LMOD2Q6P5Q4 547 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms