RNA–Protein interactions for RNA: ENST00000503180.5

DDR1-248, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 527 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-248ENST00000503180 SAFB2Q14151 953 aaKnown RBP eCLIP22.54■■□□□ 1.2
DDR1-248ENST00000503180 PLEKHH1Q9ULM0 1364 aa22.53■■□□□ 1.2
DDR1-248ENST00000503180 DLC1Q96QB1 1528 aa22.53■■□□□ 1.2
DDR1-248ENST00000503180 NBPF8Q3BBV2 869 aa22.53■■□□□ 1.2
DDR1-248ENST00000503180 HSPA1LP34931 641 aa22.51■■□□□ 1.19
DDR1-248ENST00000503180 ROCK2O75116 1388 aaKnown RBP22.5■■□□□ 1.19
DDR1-248ENST00000503180 NALCNQ8IZF0 1738 aa22.48■■□□□ 1.19
DDR1-248ENST00000503180 MST1RQ04912 1400 aa22.47■■□□□ 1.19
DDR1-248ENST00000503180 BRINP3Q76B58 766 aa22.46■■□□□ 1.19
DDR1-248ENST00000503180 CARD11Q9BXL7 1154 aa22.46■■□□□ 1.19
DDR1-248ENST00000503180 MINK1Q8N4C8 1332 aaPredicted RBP22.46■■□□□ 1.19
DDR1-248ENST00000503180 C1orf167Q5SNV9 1468 aa22.44■■□□□ 1.18
DDR1-248ENST00000503180 HIRIP3Q9BW71 556 aaPredicted RBP22.44■■□□□ 1.18
DDR1-248ENST00000503180 ROBO1Q9Y6N7 1651 aa22.43■■□□□ 1.18
DDR1-248ENST00000503180 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
DDR1-248ENST00000503180 CENPJQ9HC77 1338 aaPredicted RBP22.43■■□□□ 1.18
DDR1-248ENST00000503180 NUTM2FA1L443 756 aa22.43■■□□□ 1.18
DDR1-248ENST00000503180 ESCO1Q5FWF5 840 aa22.43■■□□□ 1.18
DDR1-248ENST00000503180 CDC42BPGQ6DT37 1551 aa22.42■■□□□ 1.18
DDR1-248ENST00000503180 WASLO00401 505 aaPredicted RBP22.41■■□□□ 1.18
DDR1-248ENST00000503180 ORAI2Q96SN7 254 aa22.41■■□□□ 1.18
DDR1-248ENST00000503180 EIF3AQ14152 1382 aaKnown RBP22.4■■□□□ 1.18
DDR1-248ENST00000503180 GPRASP1Q5JY77 1395 aa22.4■■□□□ 1.18
DDR1-248ENST00000503180 ARHGEF28Q8N1W1 1705 aaKnown RBP22.37■■□□□ 1.17
DDR1-248ENST00000503180 RALGAPBQ86X10 1494 aa22.37■■□□□ 1.17
DDR1-248ENST00000503180 CDK19Q9BWU1 502 aa22.36■■□□□ 1.17
DDR1-248ENST00000503180 LRRC59Q96AG4 307 aaKnown RBP22.34■■□□□ 1.17
DDR1-248ENST00000503180 FOXO3O43524 673 aa22.33■■□□□ 1.17
DDR1-248ENST00000503180 PHF8Q9UPP1 1060 aa22.33■■□□□ 1.17
DDR1-248ENST00000503180 ADGRB2O60241 1585 aa22.33■■□□□ 1.16
DDR1-248ENST00000503180 NPHP3Q7Z494 1330 aa22.32■■□□□ 1.16
DDR1-248ENST00000503180 FMN2Q9NZ56 1722 aa22.32■■□□□ 1.16
DDR1-248ENST00000503180 SLC24A1O60721 1099 aa22.32■■□□□ 1.16
DDR1-248ENST00000503180 ANKARQ7Z5J8 1434 aa22.31■■□□□ 1.16
DDR1-248ENST00000503180 SRPK2P78362 688 aaKnown RBP22.31■■□□□ 1.16
DDR1-248ENST00000503180 DDX17Q92841 729 aaKnown RBP22.31■■□□□ 1.16
DDR1-248ENST00000503180 NUDT16Q96DE0 195 aaKnown RBP22.31■■□□□ 1.16
DDR1-248ENST00000503180 PHLPP1O60346 1717 aa22.31■■□□□ 1.16
DDR1-248ENST00000503180 EVC2Q86UK5 1308 aa22.31■■□□□ 1.16
DDR1-248ENST00000503180 AHDC1Q5TGY3 1603 aaPredicted RBP22.3■■□□□ 1.16
DDR1-248ENST00000503180 JCADQ9P266 1359 aa22.28■■□□□ 1.16
DDR1-248ENST00000503180 PSME1Q06323 249 aa22.28■■□□□ 1.16
DDR1-248ENST00000503180 CCDC61Q9Y6R9 512 aa22.28■■□□□ 1.16
DDR1-248ENST00000503180 PMFBP1Q8TBY8 1022 aa22.27■■□□□ 1.16
DDR1-248ENST00000503180 SOS2Q07890 1332 aaPredicted RBP22.27■■□□□ 1.16
DDR1-248ENST00000503180 TULP4Q9NRJ4 1543 aa22.26■■□□□ 1.15
DDR1-248ENST00000503180 KRT28Q7Z3Y7 464 aa22.26■■□□□ 1.15
DDR1-248ENST00000503180 NGDNQ8NEJ9 315 aaKnown RBP22.26■■□□□ 1.15
DDR1-248ENST00000503180 PRR36Q9H6K5 1346 aa22.26■■□□□ 1.15
DDR1-248ENST00000503180 CABP2Q9NPB3 220 aa22.25■■□□□ 1.15
DDR1-248ENST00000503180 ST20-MTHFSA0A0A6YYL1 179 aa22.24■■□□□ 1.15
DDR1-248ENST00000503180 NHSL1Q5SYE7 1610 aa22.24■■□□□ 1.15
DDR1-248ENST00000503180 SBNO2Q9Y2G9 1366 aa22.24■■□□□ 1.15
DDR1-248ENST00000503180 QRICH2Q9H0J4 1663 aa22.23■■□□□ 1.15
DDR1-248ENST00000503180 COL16A1Q07092 1604 aaPredicted RBP22.22■■□□□ 1.15
DDR1-248ENST00000503180 XPCQ01831 940 aaPredicted RBP22.22■■□□□ 1.15
DDR1-248ENST00000503180 KIF1AQ12756 1690 aa22.21■■□□□ 1.15
DDR1-248ENST00000503180 RGPD8O14715 1765 aaPredicted RBP22.21■■□□□ 1.15
DDR1-248ENST00000503180 PLEKHG3A1L390 1219 aa22.21■■□□□ 1.15
DDR1-248ENST00000503180 SPATA31A6Q5VVP1 1343 aa22.21■■□□□ 1.15
DDR1-248ENST00000503180 USP47Q96K76 1375 aa22.2■■□□□ 1.14
DDR1-248ENST00000503180 USP32Q8NFA0 1604 aa22.19■■□□□ 1.14
DDR1-248ENST00000503180 ATP7BP35670 1465 aa22.18■■□□□ 1.14
DDR1-248ENST00000503180 PUS7Q96PZ0 661 aaKnown RBP22.17■■□□□ 1.14
DDR1-248ENST00000503180 CABP1Q9NZU7 370 aa22.17■■□□□ 1.14
DDR1-248ENST00000503180 ACEP12821 1306 aa22.16■■□□□ 1.14
DDR1-248ENST00000503180 TESK2Q96S53 571 aa22.16■■□□□ 1.14
DDR1-248ENST00000503180 PXDNQ92626 1479 aa22.15■■□□□ 1.14
DDR1-248ENST00000503180 SPATA31A3Q5VYP0 1347 aa22.15■■□□□ 1.14
DDR1-248ENST00000503180 EIF4G2P78344 907 aaKnown RBP eCLIP22.15■■□□□ 1.14
DDR1-248ENST00000503180 TMF1P82094 1093 aa22.15■■□□□ 1.14
DDR1-248ENST00000503180 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.14
DDR1-248ENST00000503180 ATAD2Q6PL18 1390 aa22.14■■□□□ 1.14
DDR1-248ENST00000503180 NUTM2BA6NNL0 878 aaPredicted RBP22.14■■□□□ 1.13
DDR1-248ENST00000503180 NUTM2EB1AL46 878 aaPredicted RBP22.14■■□□□ 1.13
DDR1-248ENST00000503180 LMOD2Q6P5Q4 547 aa22.14■■□□□ 1.13
DDR1-248ENST00000503180 NUTM2AQ8IVF1 878 aaPredicted RBP22.14■■□□□ 1.13
DDR1-248ENST00000503180 ITSN1Q15811 1721 aa22.14■■□□□ 1.13
DDR1-248ENST00000503180 SBNO1A3KN83 1393 aa22.13■■□□□ 1.13
DDR1-248ENST00000503180 PNPLA6Q8IY17 1366 aa22.13■■□□□ 1.13
DDR1-248ENST00000503180 PAK3O75914 559 aaPredicted RBP22.13■■□□□ 1.13
DDR1-248ENST00000503180 CDCA8Q53HL2 280 aa22.13■■□□□ 1.13
DDR1-248ENST00000503180 MEX3CQ5U5Q3 659 aaKnown RBP22.12■■□□□ 1.13
DDR1-248ENST00000503180 ZNF692Q9BU19 519 aaPredicted RBP22.12■■□□□ 1.13
DDR1-248ENST00000503180 PHF23Q9BUL5 403 aaPredicted RBP22.12■■□□□ 1.13
DDR1-248ENST00000503180 POLR3AO14802 1390 aaPredicted RBP22.12■■□□□ 1.13
DDR1-248ENST00000503180 DISP3Q9P2K9 1392 aa22.11■■□□□ 1.13
DDR1-248ENST00000503180 SHPRHQ149N8 1683 aa22.11■■□□□ 1.13
DDR1-248ENST00000503180 TMC1Q8TDI8 760 aa22.1■■□□□ 1.13
DDR1-248ENST00000503180 ARHGEF10O15013 1369 aa22.09■■□□□ 1.13
DDR1-248ENST00000503180 TNS3Q68CZ2 1445 aa22.07■■□□□ 1.12
DDR1-248ENST00000503180 MED1Q15648 1581 aaPredicted RBP22.07■■□□□ 1.12
DDR1-248ENST00000503180 HSPA5P11021 654 aaKnown RBP22.06■■□□□ 1.12
DDR1-248ENST00000503180 HAP1P54257 671 aaPredicted RBP22.06■■□□□ 1.12
DDR1-248ENST00000503180 BRD4O60885 1362 aaPredicted RBP22.06■■□□□ 1.12
DDR1-248ENST00000503180 TOPAZ1Q8N9V7 1692 aa22.05■■□□□ 1.12
DDR1-248ENST00000503180 TERF2IPQ9NYB0 399 aa22.05■■□□□ 1.12
DDR1-248ENST00000503180 HDGFL2Q7Z4V5 671 aaPredicted RBP22.04■■□□□ 1.12
DDR1-248ENST00000503180 SLC12A5Q9H2X9 1139 aa22.04■■□□□ 1.12
DDR1-248ENST00000503180 ADAMTS2O95450 1211 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms