RNA–Protein interactions for RNA: ENST00000503123.5

RNF4-203, Transcript of ring finger protein 4, humanhuman

TSL 5

Gene RNF4, Length 298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-203ENST00000503123 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
RNF4-203ENST00000503123 KIF1AQ12756 1690 aa12.76□□□□□ -0.37
RNF4-203ENST00000503123 C1orf167Q5SNV9 1468 aa12.75□□□□□ -0.37
RNF4-203ENST00000503123 BRINP3Q76B58 766 aa12.75□□□□□ -0.37
RNF4-203ENST00000503123 TRPM1Q7Z4N2 1603 aa12.74□□□□□ -0.37
RNF4-203ENST00000503123 KDM2AQ9Y2K7 1162 aa12.74□□□□□ -0.37
RNF4-203ENST00000503123 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
RNF4-203ENST00000503123 DISP3Q9P2K9 1392 aa12.73□□□□□ -0.37
RNF4-203ENST00000503123 STK26Q9P289 416 aa12.73□□□□□ -0.37
RNF4-203ENST00000503123 JCADQ9P266 1359 aa12.72□□□□□ -0.37
RNF4-203ENST00000503123 PLEKHH1Q9ULM0 1364 aa12.72□□□□□ -0.37
RNF4-203ENST00000503123 WAPLQ7Z5K2 1190 aa12.71□□□□□ -0.37
RNF4-203ENST00000503123 USP32Q8NFA0 1604 aa12.7□□□□□ -0.38
RNF4-203ENST00000503123 MARF1Q9Y4F3 1742 aaKnown RBP12.69□□□□□ -0.38
RNF4-203ENST00000503123 QRICH2Q9H0J4 1663 aa12.69□□□□□ -0.38
RNF4-203ENST00000503123 COL22A1Q8NFW1 1626 aaPredicted RBP12.69□□□□□ -0.38
RNF4-203ENST00000503123 L3MBTL2Q969R5 705 aa12.68□□□□□ -0.38
RNF4-203ENST00000503123 PRAM1Q96QH2 718 aa12.68□□□□□ -0.38
RNF4-203ENST00000503123 SPATA31A6Q5VVP1 1343 aa12.67□□□□□ -0.38
RNF4-203ENST00000503123 SIN3AQ96ST3 1273 aa12.67□□□□□ -0.38
RNF4-203ENST00000503123 ANKARQ7Z5J8 1434 aa12.67□□□□□ -0.38
RNF4-203ENST00000503123 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
RNF4-203ENST00000503123 LRRC59Q96AG4 307 aaKnown RBP12.66□□□□□ -0.38
RNF4-203ENST00000503123 POGKQ9P215 609 aa12.66□□□□□ -0.38
RNF4-203ENST00000503123 TRAK1Q9UPV9 953 aa12.66□□□□□ -0.38
RNF4-203ENST00000503123 TOPAZ1Q8N9V7 1692 aa12.66□□□□□ -0.38
RNF4-203ENST00000503123 TULP4Q9NRJ4 1543 aa12.66□□□□□ -0.38
RNF4-203ENST00000503123 PXDNQ92626 1479 aa12.65□□□□□ -0.38
RNF4-203ENST00000503123 SOS2Q07890 1332 aaPredicted RBP12.65□□□□□ -0.38
RNF4-203ENST00000503123 ORAI2Q96SN7 254 aa12.65□□□□□ -0.38
RNF4-203ENST00000503123 NPHP3Q7Z494 1330 aa12.64□□□□□ -0.39
RNF4-203ENST00000503123 TRPM3Q9HCF6 1732 aaPredicted RBP12.63□□□□□ -0.39
RNF4-203ENST00000503123 NEUROD1Q13562 356 aa12.63□□□□□ -0.39
RNF4-203ENST00000503123 ESCO1Q5FWF5 840 aa12.63□□□□□ -0.39
RNF4-203ENST00000503123 PNPLA6Q8IY17 1366 aa12.63□□□□□ -0.39
RNF4-203ENST00000503123 LRP6O75581 1613 aa12.62□□□□□ -0.39
RNF4-203ENST00000503123 SAFB2Q14151 953 aaKnown RBP eCLIP12.62□□□□□ -0.39
RNF4-203ENST00000503123 PHF23Q9BUL5 403 aaPredicted RBP12.62□□□□□ -0.39
RNF4-203ENST00000503123 ABCA3Q99758 1704 aa12.62□□□□□ -0.39
RNF4-203ENST00000503123 TONSLQ96HA7 1378 aa12.61□□□□□ -0.39
RNF4-203ENST00000503123 NBPF1Q3BBV0 1214 aa12.61□□□□□ -0.39
RNF4-203ENST00000503123 DDX17Q92841 729 aaKnown RBP12.61□□□□□ -0.39
RNF4-203ENST00000503123 CLSPNQ9HAW4 1339 aa12.61□□□□□ -0.39
RNF4-203ENST00000503123 ALS2Q96Q42 1657 aa12.61□□□□□ -0.39
RNF4-203ENST00000503123 ATP7BP35670 1465 aa12.6□□□□□ -0.39
RNF4-203ENST00000503123 GPRASP1Q5JY77 1395 aa12.6□□□□□ -0.39
RNF4-203ENST00000503123 WASLO00401 505 aaPredicted RBP12.6□□□□□ -0.39
RNF4-203ENST00000503123 MINK1Q8N4C8 1332 aaPredicted RBP12.6□□□□□ -0.39
RNF4-203ENST00000503123 RALGAPBQ86X10 1494 aa12.59□□□□□ -0.39
RNF4-203ENST00000503123 FOXO3O43524 673 aa12.59□□□□□ -0.39
RNF4-203ENST00000503123 PHF8Q9UPP1 1060 aa12.59□□□□□ -0.39
RNF4-203ENST00000503123 ROCK2O75116 1388 aaKnown RBP12.58□□□□□ -0.4
RNF4-203ENST00000503123 NUTM2FA1L443 756 aa12.58□□□□□ -0.4
RNF4-203ENST00000503123 ILDR2Q71H61 639 aa12.58□□□□□ -0.4
RNF4-203ENST00000503123 CENPJQ9HC77 1338 aaPredicted RBP12.58□□□□□ -0.4
RNF4-203ENST00000503123 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.57□□□□□ -0.4
RNF4-203ENST00000503123 CRYBG1Q9Y4K1 1723 aa12.57□□□□□ -0.4
RNF4-203ENST00000503123 HIRIP3Q9BW71 556 aaPredicted RBP12.57□□□□□ -0.4
RNF4-203ENST00000503123 SBNO1A3KN83 1393 aa12.56□□□□□ -0.4
RNF4-203ENST00000503123 RGS17Q9UGC6 210 aaPredicted RBP12.56□□□□□ -0.4
RNF4-203ENST00000503123 PRR36Q9H6K5 1346 aa12.56□□□□□ -0.4
RNF4-203ENST00000503123 AKAP12Q02952 1782 aa12.56□□□□□ -0.4
RNF4-203ENST00000503123 TNS3Q68CZ2 1445 aa12.55□□□□□ -0.4
RNF4-203ENST00000503123 PSME1Q06323 249 aa12.55□□□□□ -0.4
RNF4-203ENST00000503123 NBPF8Q3BBV2 869 aa12.55□□□□□ -0.4
RNF4-203ENST00000503123 SPATA31A3Q5VYP0 1347 aa12.55□□□□□ -0.4
RNF4-203ENST00000503123 SBNO2Q9Y2G9 1366 aa12.55□□□□□ -0.4
RNF4-203ENST00000503123 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
RNF4-203ENST00000503123 MEX3CQ5U5Q3 659 aaKnown RBP12.54□□□□□ -0.4
RNF4-203ENST00000503123 KRT28Q7Z3Y7 464 aa12.54□□□□□ -0.4
RNF4-203ENST00000503123 PCGF6Q9BYE7 350 aa12.54□□□□□ -0.4
RNF4-203ENST00000503123 ARHGEF10O15013 1369 aa12.54□□□□□ -0.4
RNF4-203ENST00000503123 NUDT16Q96DE0 195 aaKnown RBP12.53□□□□□ -0.4
RNF4-203ENST00000503123 CDK19Q9BWU1 502 aa12.53□□□□□ -0.4
RNF4-203ENST00000503123 TIMELESSQ9UNS1 1208 aa12.53□□□□□ -0.4
RNF4-203ENST00000503123 POLR3AO14802 1390 aaPredicted RBP12.53□□□□□ -0.4
RNF4-203ENST00000503123 PLCH1Q4KWH8 1693 aa12.52□□□□□ -0.4
RNF4-203ENST00000503123 NUTM2BA6NNL0 878 aaPredicted RBP12.52□□□□□ -0.41
RNF4-203ENST00000503123 NUTM2EB1AL46 878 aaPredicted RBP12.52□□□□□ -0.41
RNF4-203ENST00000503123 XPCQ01831 940 aaPredicted RBP12.52□□□□□ -0.41
RNF4-203ENST00000503123 ZNF772Q68DY9 489 aaPredicted RBP12.52□□□□□ -0.41
RNF4-203ENST00000503123 NUTM2AQ8IVF1 878 aaPredicted RBP12.52□□□□□ -0.41
RNF4-203ENST00000503123 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
RNF4-203ENST00000503123 PHRF1Q9P1Y6 1649 aaKnown RBP12.51□□□□□ -0.41
RNF4-203ENST00000503123 PLEKHG3A1L390 1219 aa12.5□□□□□ -0.41
RNF4-203ENST00000503123 SOCS7O14512 581 aa12.5□□□□□ -0.41
RNF4-203ENST00000503123 PMFBP1Q8TBY8 1022 aa12.5□□□□□ -0.41
RNF4-203ENST00000503123 EVC2Q86UK5 1308 aa12.5□□□□□ -0.41
RNF4-203ENST00000503123 MON2Q7Z3U7 1717 aa12.5□□□□□ -0.41
RNF4-203ENST00000503123 BRD4O60885 1362 aaPredicted RBP12.49□□□□□ -0.41
RNF4-203ENST00000503123 POTEAQ6S8J7 498 aa12.49□□□□□ -0.41
RNF4-203ENST00000503123 NGDNQ8NEJ9 315 aaKnown RBP12.49□□□□□ -0.41
RNF4-203ENST00000503123 CARD11Q9BXL7 1154 aa12.49□□□□□ -0.41
RNF4-203ENST00000503123 CDK12Q9NYV4 1490 aaPredicted RBP12.48□□□□□ -0.41
RNF4-203ENST00000503123 PPIP5K1Q6PFW1 1433 aa12.48□□□□□ -0.41
RNF4-203ENST00000503123 AFF2P51816 1311 aa12.48□□□□□ -0.41
RNF4-203ENST00000503123 SRPK2P78362 688 aaKnown RBP12.48□□□□□ -0.41
RNF4-203ENST00000503123 COL14A1Q05707 1796 aaKnown RBP12.48□□□□□ -0.41
RNF4-203ENST00000503123 C8orf37Q96NL8 207 aa12.47□□□□□ -0.41
RNF4-203ENST00000503123 NRKQ7Z2Y5 1582 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms