RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 WFS1O76024 890 aa10.37□□□□□ -0.75
PROM1-203ENST00000502943 SMCPP49901 116 aaPredicted RBP10.37□□□□□ -0.75
PROM1-203ENST00000502943 SMPD1P17405 629 aa10.35□□□□□ -0.75
PROM1-203ENST00000502943 WNT7AO00755 349 aa10.34□□□□□ -0.75
PROM1-203ENST00000502943 TRIM32Q13049 653 aa10.34□□□□□ -0.75
PROM1-203ENST00000502943 NFX1Q12986 1120 aaKnown RBP10.33□□□□□ -0.76
PROM1-203ENST00000502943 SNIP1Q8TAD8 396 aaKnown RBP10.33□□□□□ -0.76
PROM1-203ENST00000502943 MRGPRX2Q96LB1 330 aa10.32□□□□□ -0.76
PROM1-203ENST00000502943 J3QL48 77 aa10.31□□□□□ -0.76
PROM1-203ENST00000502943 MMP16P51512 607 aa10.31□□□□□ -0.76
PROM1-203ENST00000502943 GRIPAP1Q4V328 841 aa10.31□□□□□ -0.76
PROM1-203ENST00000502943 ATP13A2Q9NQ11 1180 aa10.31□□□□□ -0.76
PROM1-203ENST00000502943 SNRPBP14678 240 aaKnown RBP10.3□□□□□ -0.76
PROM1-203ENST00000502943 GPIHBP1Q8IV16 184 aa10.3□□□□□ -0.76
PROM1-203ENST00000502943 Q3C1V9 767 aa10.29□□□□□ -0.76
PROM1-203ENST00000502943 LCE2CQ5TA81 110 aa10.29□□□□□ -0.76
PROM1-203ENST00000502943 CD46P15529 392 aa10.28□□□□□ -0.76
PROM1-203ENST00000502943 HLA-CQ95604 372 aa10.28□□□□□ -0.76
PROM1-203ENST00000502943 DXOO77932 396 aaKnown RBP10.27□□□□□ -0.77
PROM1-203ENST00000502943 HPS1Q92902 700 aa10.27□□□□□ -0.77
PROM1-203ENST00000502943 USB1Q9BQ65 265 aaKnown RBP10.27□□□□□ -0.77
PROM1-203ENST00000502943 CCDC24Q8N4L8 307 aa10.25□□□□□ -0.77
PROM1-203ENST00000502943 TRIM47Q96LD4 638 aa10.25□□□□□ -0.77
PROM1-203ENST00000502943 WIPF1O43516 503 aa10.24□□□□□ -0.77
PROM1-203ENST00000502943 KDM4AO75164 1064 aa10.24□□□□□ -0.77
PROM1-203ENST00000502943 SKOR1P84550 965 aa10.23□□□□□ -0.77
PROM1-203ENST00000502943 STK17AQ9UEE5 414 aa10.23□□□□□ -0.77
PROM1-203ENST00000502943 TERTO14746 1132 aaKnown RBP10.22□□□□□ -0.77
PROM1-203ENST00000502943 RC3H1Q5TC82 1133 aaKnown RBP10.22□□□□□ -0.77
PROM1-203ENST00000502943 REPIN1Q9BWE0 567 aaKnown RBP10.22□□□□□ -0.77
PROM1-203ENST00000502943 SENP2Q9HC62 589 aa10.21□□□□□ -0.77
PROM1-203ENST00000502943 MDM2Q00987 491 aaPredicted RBP10.2□□□□□ -0.78
PROM1-203ENST00000502943 INSM1Q01101 510 aaPredicted RBP10.2□□□□□ -0.78
PROM1-203ENST00000502943 GUCA2AQ02747 115 aa10.2□□□□□ -0.78
PROM1-203ENST00000502943 MAP2K5Q13163 448 aa10.19□□□□□ -0.78
PROM1-203ENST00000502943 HOXA2O43364 376 aa10.18□□□□□ -0.78
PROM1-203ENST00000502943 WNT7BP56706 349 aa10.18□□□□□ -0.78
PROM1-203ENST00000502943 ALDH1A1P00352 501 aa10.17□□□□□ -0.78
PROM1-203ENST00000502943 USP46P62068 366 aa10.17□□□□□ -0.78
PROM1-203ENST00000502943 SYMPKQ92797 1274 aaKnown RBP10.17□□□□□ -0.78
PROM1-203ENST00000502943 PLCB2Q00722 1185 aa10.16□□□□□ -0.78
PROM1-203ENST00000502943 KIFC2Q96AC6 838 aa10.16□□□□□ -0.78
PROM1-203ENST00000502943 IRF6O14896 467 aa10.15□□□□□ -0.78
PROM1-203ENST00000502943 JUNDP17535 347 aa10.15□□□□□ -0.78
PROM1-203ENST00000502943 PTCRAQ6ISU1 281 aaPredicted RBP10.13□□□□□ -0.79
PROM1-203ENST00000502943 BMP1P13497 986 aa10.12□□□□□ -0.79
PROM1-203ENST00000502943 SIAH2O43255 324 aa10.1□□□□□ -0.79
PROM1-203ENST00000502943 EHBP1Q8NDI1 1231 aa10.1□□□□□ -0.79
PROM1-203ENST00000502943 CCDC102AQ96A19 550 aa10.1□□□□□ -0.79
PROM1-203ENST00000502943 NUDT12Q9BQG2 462 aa10.1□□□□□ -0.79
PROM1-203ENST00000502943 TRIM46Q7Z4K8 759 aa10.09□□□□□ -0.79
PROM1-203ENST00000502943 MINK1Q8N4C8 1332 aaPredicted RBP10.08□□□□□ -0.8
PROM1-203ENST00000502943 RETREG3Q86VR2 466 aa10.08□□□□□ -0.8
PROM1-203ENST00000502943 FAM217BQ9NTX9 383 aaPredicted RBP10.08□□□□□ -0.8
PROM1-203ENST00000502943 GPCPD1Q9NPB8 672 aa10.07□□□□□ -0.8
PROM1-203ENST00000502943 NXF1Q9UBU9 619 aaKnown RBP10.07□□□□□ -0.8
PROM1-203ENST00000502943 CAPN5O15484 640 aaPredicted RBP10.06□□□□□ -0.8
PROM1-203ENST00000502943 SLC16A10Q8TF71 515 aa10.06□□□□□ -0.8
PROM1-203ENST00000502943 WASF2Q9Y6W5 498 aa10.06□□□□□ -0.8
PROM1-203ENST00000502943 GMPRP36959 345 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 VEGFBP49765 207 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 SH3BP2P78314 561 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 NUTM1Q86Y26 1132 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 PCDHGC3Q9UN70 934 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 KDM2AQ9Y2K7 1162 aa10.05□□□□□ -0.8
PROM1-203ENST00000502943 CLCN1P35523 988 aa10.04□□□□□ -0.8
PROM1-203ENST00000502943 C6orf229H3BNL8 230 aa10.03□□□□□ -0.8
PROM1-203ENST00000502943 FDX1P10109 184 aa10.03□□□□□ -0.8
PROM1-203ENST00000502943 HAP1P54257 671 aaPredicted RBP10.03□□□□□ -0.8
PROM1-203ENST00000502943 CCNYL3P0C7X3 344 aa10.02□□□□□ -0.81
PROM1-203ENST00000502943 MS4A1P11836 297 aa10.02□□□□□ -0.81
PROM1-203ENST00000502943 LORP23490 312 aaPredicted RBP10.02□□□□□ -0.81
PROM1-203ENST00000502943 LINC01559Q495D7 138 aa10.02□□□□□ -0.81
PROM1-203ENST00000502943 TLL2Q9Y6L7 1015 aa10.02□□□□□ -0.81
PROM1-203ENST00000502943 UNC93B1Q9H1C4 597 aa10□□□□□ -0.81
PROM1-203ENST00000502943 H3BM21 787 aa9.99□□□□□ -0.81
PROM1-203ENST00000502943 TULP1O00294 542 aaPredicted RBP9.99□□□□□ -0.81
PROM1-203ENST00000502943 IRF7Q92985 503 aa9.99□□□□□ -0.81
PROM1-203ENST00000502943 ERBB4Q15303 1308 aa9.99□□□□□ -0.81
PROM1-203ENST00000502943 KRI1Q8N9T8 703 aaKnown RBP9.98□□□□□ -0.81
PROM1-203ENST00000502943 ZSCAN1Q8NBB4 408 aa9.98□□□□□ -0.81
PROM1-203ENST00000502943 BAP1Q92560 729 aa9.98□□□□□ -0.81
PROM1-203ENST00000502943 ZFP42Q96MM3 310 aa9.98□□□□□ -0.81
PROM1-203ENST00000502943 NDUFV2P19404 249 aa9.97□□□□□ -0.81
PROM1-203ENST00000502943 PTPRNQ16849 979 aa9.97□□□□□ -0.81
PROM1-203ENST00000502943 NPAS3Q8IXF0 933 aa9.97□□□□□ -0.81
PROM1-203ENST00000502943 FAM181BA6NEQ2 426 aa9.96□□□□□ -0.82
PROM1-203ENST00000502943 SPIRE2Q8WWL2 714 aa9.96□□□□□ -0.82
PROM1-203ENST00000502943 EVA1BQ9NVM1 165 aa9.96□□□□□ -0.82
PROM1-203ENST00000502943 MOXD2PA6NHM9 499 aa9.94□□□□□ -0.82
PROM1-203ENST00000502943 KCNH2Q12809 1159 aa9.94□□□□□ -0.82
PROM1-203ENST00000502943 NNTQ13423 1086 aa9.94□□□□□ -0.82
PROM1-203ENST00000502943 ZNF511Q8NB15 262 aa9.94□□□□□ -0.82
PROM1-203ENST00000502943 PRR7Q8TB68 274 aa9.94□□□□□ -0.82
PROM1-203ENST00000502943 SSTR3P32745 418 aaPredicted RBP9.93□□□□□ -0.82
PROM1-203ENST00000502943 SOBPA7XYQ1 873 aa9.92□□□□□ -0.82
PROM1-203ENST00000502943 PURBQ96QR8 312 aaKnown RBP9.92□□□□□ -0.82
PROM1-203ENST00000502943 TIMP2P16035 220 aa9.91□□□□□ -0.82
PROM1-203ENST00000502943 VARSP26640 1264 aaKnown RBP9.91□□□□□ -0.82
PROM1-203ENST00000502943 MRPL14Q6P1L8 145 aaKnown RBP9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms