RNA–Protein interactions for RNA: ENST00000502848.5

NR1I3-216, Transcript of nuclear receptor subfamily 1 group I member 3, humanhuman

TSL 1 (best)

Gene NR1I3, Length 914 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1I3-216ENST00000502848 EVC2Q86UK5 1308 aa12.51□□□□□ -0.41
NR1I3-216ENST00000502848 LTKP29376 864 aa12.5□□□□□ -0.41
NR1I3-216ENST00000502848 MIER1Q8N108 512 aa12.5□□□□□ -0.41
NR1I3-216ENST00000502848 MYOM1P52179 1685 aa12.49□□□□□ -0.41
NR1I3-216ENST00000502848 ADGRB2O60241 1585 aa12.49□□□□□ -0.41
NR1I3-216ENST00000502848 METP08581 1390 aa12.49□□□□□ -0.41
NR1I3-216ENST00000502848 NPC1L1Q9UHC9 1359 aa12.49□□□□□ -0.41
NR1I3-216ENST00000502848 ANKLE2Q86XL3 938 aa12.49□□□□□ -0.41
NR1I3-216ENST00000502848 TULP4Q9NRJ4 1543 aa12.48□□□□□ -0.41
NR1I3-216ENST00000502848 ATAD2Q6PL18 1390 aa12.48□□□□□ -0.41
NR1I3-216ENST00000502848 XRN1Q8IZH2 1706 aaKnown RBP12.47□□□□□ -0.41
NR1I3-216ENST00000502848 PRAM1Q96QH2 718 aa12.45□□□□□ -0.42
NR1I3-216ENST00000502848 PRKRIP1Q9H875 184 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-216ENST00000502848 POGKQ9P215 609 aa12.45□□□□□ -0.42
NR1I3-216ENST00000502848 NPHP4O75161 1426 aaPredicted RBP12.45□□□□□ -0.42
NR1I3-216ENST00000502848 USP32Q8NFA0 1604 aa12.44□□□□□ -0.42
NR1I3-216ENST00000502848 PER1O15534 1290 aaPredicted RBP12.43□□□□□ -0.42
NR1I3-216ENST00000502848 RALBP1Q15311 655 aa12.43□□□□□ -0.42
NR1I3-216ENST00000502848 DCAF8L1A6NGE4 600 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 BCANQ96GW7 911 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 STK26Q9P289 416 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 PTPRUQ92729 1446 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 PARD3Q8TEW0 1356 aa12.42□□□□□ -0.42
NR1I3-216ENST00000502848 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
NR1I3-216ENST00000502848 ATP7BP35670 1465 aa12.4□□□□□ -0.42
NR1I3-216ENST00000502848 KDM4FA0A1W2PPD8 638 aa12.4□□□□□ -0.42
NR1I3-216ENST00000502848 POLR3GLQ9BT43 218 aa12.4□□□□□ -0.42
NR1I3-216ENST00000502848 NSD2O96028 1365 aa12.4□□□□□ -0.42
NR1I3-216ENST00000502848 NKTRP30414 1462 aaKnown RBP12.4□□□□□ -0.43
NR1I3-216ENST00000502848 PANK3Q9H999 370 aa12.39□□□□□ -0.43
NR1I3-216ENST00000502848 KNSTRNQ9Y448 316 aa12.39□□□□□ -0.43
NR1I3-216ENST00000502848 CHD2O14647 1828 aaKnown RBP12.39□□□□□ -0.43
NR1I3-216ENST00000502848 SLC26A8Q96RN1 970 aa12.38□□□□□ -0.43
NR1I3-216ENST00000502848 AMOTL2Q9Y2J4 779 aa12.38□□□□□ -0.43
NR1I3-216ENST00000502848 LMTK3Q96Q04 1460 aa12.38□□□□□ -0.43
NR1I3-216ENST00000502848 MYBBP1AQ9BQG0 1328 aaKnown RBP12.37□□□□□ -0.43
NR1I3-216ENST00000502848 ANKARQ7Z5J8 1434 aa12.37□□□□□ -0.43
NR1I3-216ENST00000502848 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
NR1I3-216ENST00000502848 WASLO00401 505 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-216ENST00000502848 BRD4O60885 1362 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-216ENST00000502848 PLEKHH1Q9ULM0 1364 aa12.37□□□□□ -0.43
NR1I3-216ENST00000502848 CDC42BPGQ6DT37 1551 aa12.37□□□□□ -0.43
NR1I3-216ENST00000502848 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
NR1I3-216ENST00000502848 SRPK2P78362 688 aaKnown RBP12.36□□□□□ -0.43
NR1I3-216ENST00000502848 AMER1Q5JTC6 1135 aaPredicted RBP12.36□□□□□ -0.43
NR1I3-216ENST00000502848 TERF2IPQ9NYB0 399 aa12.36□□□□□ -0.43
NR1I3-216ENST00000502848 KCNA6P17658 529 aa12.35□□□□□ -0.43
NR1I3-216ENST00000502848 WAPLQ7Z5K2 1190 aa12.35□□□□□ -0.43
NR1I3-216ENST00000502848 CDK19Q9BWU1 502 aa12.35□□□□□ -0.43
NR1I3-216ENST00000502848 TOPAZ1Q8N9V7 1692 aa12.35□□□□□ -0.43
NR1I3-216ENST00000502848 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.34□□□□□ -0.43
NR1I3-216ENST00000502848 INSRP06213 1382 aa12.34□□□□□ -0.43
NR1I3-216ENST00000502848 NLRP13Q86W25 1043 aa12.34□□□□□ -0.43
NR1I3-216ENST00000502848 CGNL1Q0VF96 1302 aa12.34□□□□□ -0.43
NR1I3-216ENST00000502848 SAFB2Q14151 953 aaKnown RBP eCLIP12.33□□□□□ -0.44
NR1I3-216ENST00000502848 CPSF1Q10570 1443 aaKnown RBP12.33□□□□□ -0.44
NR1I3-216ENST00000502848 NSD3Q9BZ95 1437 aa12.33□□□□□ -0.44
NR1I3-216ENST00000502848 ADGRL3Q9HAR2 1447 aa12.33□□□□□ -0.44
NR1I3-216ENST00000502848 CD163L1Q9NR16 1453 aa12.33□□□□□ -0.44
NR1I3-216ENST00000502848 ITSN1Q15811 1721 aa12.32□□□□□ -0.44
NR1I3-216ENST00000502848 HDGFL2Q7Z4V5 671 aaPredicted RBP12.32□□□□□ -0.44
NR1I3-216ENST00000502848 CABP2Q9NPB3 220 aa12.32□□□□□ -0.44
NR1I3-216ENST00000502848 CCDC61Q9Y6R9 512 aa12.32□□□□□ -0.44
NR1I3-216ENST00000502848 A0A1W2PP64 1363 aa12.31□□□□□ -0.44
NR1I3-216ENST00000502848 DCCP43146 1447 aa12.31□□□□□ -0.44
NR1I3-216ENST00000502848 EDC4Q6P2E9 1401 aaKnown RBP12.31□□□□□ -0.44
NR1I3-216ENST00000502848 CARD14Q9BXL6 1004 aa12.31□□□□□ -0.44
NR1I3-216ENST00000502848 SLC12A5Q9H2X9 1139 aa12.31□□□□□ -0.44
NR1I3-216ENST00000502848 PPIP5K1Q6PFW1 1433 aa12.3□□□□□ -0.44
NR1I3-216ENST00000502848 TMC1Q8TDI8 760 aa12.3□□□□□ -0.44
NR1I3-216ENST00000502848 ZNF692Q9BU19 519 aaPredicted RBP12.3□□□□□ -0.44
NR1I3-216ENST00000502848 NCKAP5LQ9HCH0 1330 aa12.3□□□□□ -0.44
NR1I3-216ENST00000502848 FMN2Q9NZ56 1722 aa12.29□□□□□ -0.44
NR1I3-216ENST00000502848 PLEKHG3A1L390 1219 aa12.29□□□□□ -0.44
NR1I3-216ENST00000502848 NUDT16Q96DE0 195 aaKnown RBP12.29□□□□□ -0.44
NR1I3-216ENST00000502848 MON2Q7Z3U7 1717 aa12.28□□□□□ -0.44
NR1I3-216ENST00000502848 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-216ENST00000502848 POLR3AO14802 1390 aaPredicted RBP12.28□□□□□ -0.44
NR1I3-216ENST00000502848 NALCNQ8IZF0 1738 aa12.28□□□□□ -0.44
NR1I3-216ENST00000502848 ANKRD26Q9UPS8 1709 aa12.28□□□□□ -0.44
NR1I3-216ENST00000502848 MRS2Q9HD23 443 aa12.27□□□□□ -0.45
NR1I3-216ENST00000502848 AKAP12Q02952 1782 aa12.26□□□□□ -0.45
NR1I3-216ENST00000502848 STRCQ7RTU9 1775 aa12.26□□□□□ -0.45
NR1I3-216ENST00000502848 CABP1Q9NZU7 370 aa12.26□□□□□ -0.45
NR1I3-216ENST00000502848 PRR36Q9H6K5 1346 aa12.26□□□□□ -0.45
NR1I3-216ENST00000502848 NRKQ7Z2Y5 1582 aa12.26□□□□□ -0.45
NR1I3-216ENST00000502848 CC2D1BQ5T0F9 858 aaKnown RBP12.24□□□□□ -0.45
NR1I3-216ENST00000502848 LRRC7Q96NW7 1537 aa12.24□□□□□ -0.45
NR1I3-216ENST00000502848 KIF20BQ96Q89 1820 aa12.23□□□□□ -0.45
NR1I3-216ENST00000502848 USP6P35125 1406 aa12.23□□□□□ -0.45
NR1I3-216ENST00000502848 TTC21AQ8NDW8 1320 aa12.23□□□□□ -0.45
NR1I3-216ENST00000502848 PPP2R1AP30153 589 aa12.23□□□□□ -0.45
NR1I3-216ENST00000502848 SSH2Q76I76 1423 aa12.22□□□□□ -0.45
NR1I3-216ENST00000502848 MORC1Q86VD1 984 aa12.22□□□□□ -0.45
NR1I3-216ENST00000502848 PNISRQ8TF01 805 aaKnown RBP12.22□□□□□ -0.45
NR1I3-216ENST00000502848 C19orf44Q9H6X5 657 aa12.21□□□□□ -0.45
NR1I3-216ENST00000502848 KIF1AQ12756 1690 aa12.21□□□□□ -0.45
NR1I3-216ENST00000502848 AATKQ6ZMQ8 1374 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms