RNA–Protein interactions for RNA: ENST00000502495.1

SCLT1-203, Transcript of sodium channel and clathrin linker 1, humanhuman

TSL 2

Gene SCLT1, Length 1,811 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-203ENST00000502495 ADGRG1Q9Y653 693 aa6.09□□□□□ -1.44
SCLT1-203ENST00000502495 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.08□□□□□ -1.44
SCLT1-203ENST00000502495 NUTM2FA1L443 756 aa6.08□□□□□ -1.44
SCLT1-203ENST00000502495 SMPD1P17405 629 aa6.07□□□□□ -1.44
SCLT1-203ENST00000502495 BARGINQ6ZT62 677 aa6.07□□□□□ -1.44
SCLT1-203ENST00000502495 KRI1Q8N9T8 703 aaKnown RBP6.07□□□□□ -1.44
SCLT1-203ENST00000502495 WNT7AO00755 349 aa6.06□□□□□ -1.44
SCLT1-203ENST00000502495 SUZ12Q15022 739 aaKnown RBP6.06□□□□□ -1.44
SCLT1-203ENST00000502495 PUS10Q3MIT2 529 aaKnown RBP6.06□□□□□ -1.44
SCLT1-203ENST00000502495 NPAS3Q8IXF0 933 aa6.05□□□□□ -1.44
SCLT1-203ENST00000502495 IRF7Q92985 503 aa6.05□□□□□ -1.44
SCLT1-203ENST00000502495 FMNL1O95466 1100 aaPredicted RBP6.04□□□□□ -1.44
SCLT1-203ENST00000502495 PTGDRQ13258 359 aa6.04□□□□□ -1.44
SCLT1-203ENST00000502495 NXF1Q9UBU9 619 aaKnown RBP6.04□□□□□ -1.44
SCLT1-203ENST00000502495 GMPRP36959 345 aa6.04□□□□□ -1.44
SCLT1-203ENST00000502495 GPR37O15354 613 aa6.03□□□□□ -1.44
SCLT1-203ENST00000502495 NISCHQ9Y2I1 1504 aa6.03□□□□□ -1.44
SCLT1-203ENST00000502495 FCHSD2O94868 740 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 NEUROD2Q15784 382 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 AK7Q96M32 723 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 REPIN1Q9BWE0 567 aaKnown RBP6.02□□□□□ -1.45
SCLT1-203ENST00000502495 OATP04181 439 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 BRPF1P55201 1214 aaPredicted RBP6.02□□□□□ -1.45
SCLT1-203ENST00000502495 MORN1Q5T089 497 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 THAP11Q96EK4 314 aa6.02□□□□□ -1.45
SCLT1-203ENST00000502495 GNPATO15228 680 aa6.01□□□□□ -1.45
SCLT1-203ENST00000502495 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
SCLT1-203ENST00000502495 FAM160A2Q8N612 972 aaPredicted RBP6.01□□□□□ -1.45
SCLT1-203ENST00000502495 SALL2Q9Y467 1007 aaPredicted RBP6.01□□□□□ -1.45
SCLT1-203ENST00000502495 J3QL48 77 aa6□□□□□ -1.45
SCLT1-203ENST00000502495 HIC1Q14526 733 aa6□□□□□ -1.45
SCLT1-203ENST00000502495 MRGPRX2Q96LB1 330 aa6□□□□□ -1.45
SCLT1-203ENST00000502495 ATP6V1AP38606 617 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 FAM161AQ3B820 660 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 HPS1Q92902 700 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 FECHP22830 423 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 TRIM32Q13049 653 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 MAP2K5Q13163 448 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 MSS51Q4VC12 460 aa5.99□□□□□ -1.45
SCLT1-203ENST00000502495 MINK1Q8N4C8 1332 aaPredicted RBP5.98□□□□□ -1.45
SCLT1-203ENST00000502495 PXYLP1Q8TE99 480 aa5.98□□□□□ -1.45
SCLT1-203ENST00000502495 H3BM21 787 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 TRIM66O15016 1216 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 RDH13Q8NBN7 331 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 IRF6O14896 467 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 TMEM132AQ24JP5 1023 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 BRICD5Q6PL45 260 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 CCDC102AQ96A19 550 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 PRDM9Q9NQV7 894 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 SLC27A5Q9Y2P5 690 aa5.97□□□□□ -1.45
SCLT1-203ENST00000502495 FUT2Q10981 343 aa5.96□□□□□ -1.46
SCLT1-203ENST00000502495 PDE4DQ08499 809 aa5.95□□□□□ -1.46
SCLT1-203ENST00000502495 GPBP1L1Q9HC44 474 aaPredicted RBP5.95□□□□□ -1.46
SCLT1-203ENST00000502495 KCNMA1Q12791 1236 aa5.95□□□□□ -1.46
SCLT1-203ENST00000502495 GRIPAP1Q4V328 841 aa5.95□□□□□ -1.46
SCLT1-203ENST00000502495 DAXXQ9UER7 740 aaPredicted RBP5.95□□□□□ -1.46
SCLT1-203ENST00000502495 RC3H1Q5TC82 1133 aaKnown RBP5.94□□□□□ -1.46
SCLT1-203ENST00000502495 WNT7BP56706 349 aa5.93□□□□□ -1.46
SCLT1-203ENST00000502495 Q3C1V9 767 aa5.93□□□□□ -1.46
SCLT1-203ENST00000502495 KCTD17Q8N5Z5 321 aa5.93□□□□□ -1.46
SCLT1-203ENST00000502495 VEGFBP49765 207 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 MMP16P51512 607 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 KDM4CQ9H3R0 1056 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 ALDH1A1P00352 501 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 GCGRP47871 477 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 METTL3Q86U44 580 aaKnown RBP5.92□□□□□ -1.46
SCLT1-203ENST00000502495 ERBB4Q15303 1308 aa5.92□□□□□ -1.46
SCLT1-203ENST00000502495 DDX11L8A8MPP1 907 aa5.91□□□□□ -1.46
SCLT1-203ENST00000502495 SULF1Q8IWU6 871 aa5.91□□□□□ -1.46
SCLT1-203ENST00000502495 CAPN5O15484 640 aaPredicted RBP5.9□□□□□ -1.46
SCLT1-203ENST00000502495 AMHR2Q16671 573 aa5.9□□□□□ -1.46
SCLT1-203ENST00000502495 TRIM46Q7Z4K8 759 aa5.9□□□□□ -1.46
SCLT1-203ENST00000502495 TMEM151AQ8N4L1 468 aa5.9□□□□□ -1.46
SCLT1-203ENST00000502495 TTLL12Q14166 644 aaPredicted RBP5.9□□□□□ -1.47
SCLT1-203ENST00000502495 RNF19BQ6ZMZ0 732 aa5.9□□□□□ -1.47
SCLT1-203ENST00000502495 IL27Q8NEV9 243 aa5.9□□□□□ -1.47
SCLT1-203ENST00000502495 PARP9Q8IXQ6 854 aa5.89□□□□□ -1.47
SCLT1-203ENST00000502495 WASF2Q9Y6W5 498 aa5.89□□□□□ -1.47
SCLT1-203ENST00000502495 BMP1P13497 986 aa5.88□□□□□ -1.47
SCLT1-203ENST00000502495 CCDC24Q8N4L8 307 aa5.88□□□□□ -1.47
SCLT1-203ENST00000502495 GTF3C3Q9Y5Q9 886 aa5.88□□□□□ -1.47
SCLT1-203ENST00000502495 DXOO77932 396 aaKnown RBP5.88□□□□□ -1.47
SCLT1-203ENST00000502495 RNF225M0QZC1 329 aaPredicted RBP5.87□□□□□ -1.47
SCLT1-203ENST00000502495 VSIG8P0DPA2 414 aa5.87□□□□□ -1.47
SCLT1-203ENST00000502495 SKOR1P84550 965 aa5.87□□□□□ -1.47
SCLT1-203ENST00000502495 USB1Q9BQ65 265 aaKnown RBP5.87□□□□□ -1.47
SCLT1-203ENST00000502495 GDF11O95390 407 aa5.86□□□□□ -1.47
SCLT1-203ENST00000502495 PHOX2BQ99453 314 aa5.86□□□□□ -1.47
SCLT1-203ENST00000502495 FAM117AQ9C073 453 aa5.86□□□□□ -1.47
SCLT1-203ENST00000502495 MDM2Q00987 491 aaPredicted RBP5.85□□□□□ -1.47
SCLT1-203ENST00000502495 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
SCLT1-203ENST00000502495 CLCN1P35523 988 aa5.85□□□□□ -1.47
SCLT1-203ENST00000502495 RASSF7Q02833 373 aa5.85□□□□□ -1.47
SCLT1-203ENST00000502495 SCARF1Q14162 830 aa5.85□□□□□ -1.47
SCLT1-203ENST00000502495 NLRP7Q8WX94 980 aa5.85□□□□□ -1.47
SCLT1-203ENST00000502495 ZFP42Q96MM3 310 aa5.85□□□□□ -1.47
SCLT1-203ENST00000502495 GSK3AP49840 483 aa5.84□□□□□ -1.47
SCLT1-203ENST00000502495 EHBP1Q8NDI1 1231 aa5.84□□□□□ -1.47
SCLT1-203ENST00000502495 DDRGK1Q96HY6 314 aa5.84□□□□□ -1.47
SCLT1-203ENST00000502495 GPCPD1Q9NPB8 672 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms