RNA–Protein interactions for RNA: ENST00000502393.5

SFXN1-203, Transcript of sideroflexin 1, humanhuman

TSL 2 BASIC

Gene SFXN1, Length 637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-203ENST00000502393 ZNF772Q68DY9 489 aaPredicted RBP29.08■■■□□ 2.25
SFXN1-203ENST00000502393 NUTM2AQ8IVF1 878 aaPredicted RBP29.08■■■□□ 2.25
SFXN1-203ENST00000502393 CDC42BPGQ6DT37 1551 aa29.07■■■□□ 2.24
SFXN1-203ENST00000502393 WAPLQ7Z5K2 1190 aa29.07■■■□□ 2.24
SFXN1-203ENST00000502393 C14orf93Q9H972 538 aaKnown RBP29.07■■■□□ 2.24
SFXN1-203ENST00000502393 NRXN1Q9ULB1 1477 aa29.07■■■□□ 2.24
SFXN1-203ENST00000502393 MYOM2P54296 1465 aa29.06■■■□□ 2.24
SFXN1-203ENST00000502393 YTHDC2Q9H6S0 1430 aaKnown RBP29.05■■■□□ 2.24
SFXN1-203ENST00000502393 KNDC1Q76NI1 1749 aa29.05■■■□□ 2.24
SFXN1-203ENST00000502393 PNPLA6Q8IY17 1366 aa29.04■■■□□ 2.24
SFXN1-203ENST00000502393 SOS2Q07890 1332 aaPredicted RBP29.04■■■□□ 2.24
SFXN1-203ENST00000502393 SIRT1Q96EB6 747 aa29.03■■■□□ 2.24
SFXN1-203ENST00000502393 ESCO1Q5FWF5 840 aa29■■■□□ 2.23
SFXN1-203ENST00000502393 CFAP70Q5T0N1 1121 aa29■■■□□ 2.23
SFXN1-203ENST00000502393 DHX57Q6P158 1386 aaKnown RBP29■■■□□ 2.23
SFXN1-203ENST00000502393 PLEKHH1Q9ULM0 1364 aa29■■■□□ 2.23
SFXN1-203ENST00000502393 NPHP3Q7Z494 1330 aa28.96■■■□□ 2.23
SFXN1-203ENST00000502393 AFF2P51816 1311 aa28.94■■■□□ 2.22
SFXN1-203ENST00000502393 STAC3Q96MF2 364 aa28.92■■■□□ 2.22
SFXN1-203ENST00000502393 C8orf37Q96NL8 207 aa28.92■■■□□ 2.22
SFXN1-203ENST00000502393 NUTM2FA1L443 756 aa28.91■■■□□ 2.22
SFXN1-203ENST00000502393 FOXO3O43524 673 aa28.91■■■□□ 2.22
SFXN1-203ENST00000502393 RXRBP28702 533 aa28.91■■■□□ 2.22
SFXN1-203ENST00000502393 DCAF11Q8TEB1 546 aa28.89■■■□□ 2.22
SFXN1-203ENST00000502393 PXDNQ92626 1479 aa28.89■■■□□ 2.22
SFXN1-203ENST00000502393 FMN2Q9NZ56 1722 aa28.89■■■□□ 2.21
SFXN1-203ENST00000502393 ADAMTS2O95450 1211 aa28.87■■■□□ 2.21
SFXN1-203ENST00000502393 PRAM1Q96QH2 718 aa28.87■■■□□ 2.21
SFXN1-203ENST00000502393 KDM2AQ9Y2K7 1162 aa28.87■■■□□ 2.21
SFXN1-203ENST00000502393 DLC1Q96QB1 1528 aa28.86■■■□□ 2.21
SFXN1-203ENST00000502393 COL22A1Q8NFW1 1626 aaPredicted RBP28.86■■■□□ 2.21
SFXN1-203ENST00000502393 NGLY1Q96IV0 654 aa28.85■■■□□ 2.21
SFXN1-203ENST00000502393 ADGRB1O14514 1584 aa28.84■■■□□ 2.21
SFXN1-203ENST00000502393 XPCQ01831 940 aaPredicted RBP28.83■■■□□ 2.21
SFXN1-203ENST00000502393 QTRT2Q9H974 415 aaKnown RBP28.83■■■□□ 2.21
SFXN1-203ENST00000502393 POGKQ9P215 609 aa28.83■■■□□ 2.21
SFXN1-203ENST00000502393 CDK12Q9NYV4 1490 aaPredicted RBP28.83■■■□□ 2.21
SFXN1-203ENST00000502393 SAFB2Q14151 953 aaKnown RBP eCLIP28.82■■■□□ 2.2
SFXN1-203ENST00000502393 KIF1AQ12756 1690 aa28.82■■■□□ 2.2
SFXN1-203ENST00000502393 TRAK1Q9UPV9 953 aa28.79■■■□□ 2.2
SFXN1-203ENST00000502393 RBM6P78332 1123 aaKnown RBP28.78■■■□□ 2.2
SFXN1-203ENST00000502393 FNBP4Q8N3X1 1017 aaPredicted RBP28.77■■■□□ 2.2
SFXN1-203ENST00000502393 PHF8Q9UPP1 1060 aa28.77■■■□□ 2.2
SFXN1-203ENST00000502393 KRT28Q7Z3Y7 464 aa28.76■■■□□ 2.19
SFXN1-203ENST00000502393 SPATA31A3Q5VYP0 1347 aa28.75■■■□□ 2.19
SFXN1-203ENST00000502393 USP21Q9UK80 565 aa28.75■■■□□ 2.19
SFXN1-203ENST00000502393 ADGRB2O60241 1585 aa28.74■■■□□ 2.19
SFXN1-203ENST00000502393 PSME1Q06323 249 aa28.73■■■□□ 2.19
SFXN1-203ENST00000502393 RGPD8O14715 1765 aaPredicted RBP28.73■■■□□ 2.19
SFXN1-203ENST00000502393 ANKARQ7Z5J8 1434 aa28.72■■■□□ 2.19
SFXN1-203ENST00000502393 TRPC5Q9UL62 973 aaPredicted RBP28.71■■■□□ 2.19
SFXN1-203ENST00000502393 UPF1Q92900 1129 aaKnown RBP eCLIP28.69■■■□□ 2.18
SFXN1-203ENST00000502393 HIRIP3Q9BW71 556 aaPredicted RBP28.69■■■□□ 2.18
SFXN1-203ENST00000502393 EIF3AQ14152 1382 aaKnown RBP28.68■■■□□ 2.18
SFXN1-203ENST00000502393 RGS12O14924 1447 aa28.68■■■□□ 2.18
SFXN1-203ENST00000502393 MINK1Q8N4C8 1332 aaPredicted RBP28.68■■■□□ 2.18
SFXN1-203ENST00000502393 TNS3Q68CZ2 1445 aa28.67■■■□□ 2.18
SFXN1-203ENST00000502393 MARF1Q9Y4F3 1742 aaKnown RBP28.66■■■□□ 2.18
SFXN1-203ENST00000502393 SBNO1A3KN83 1393 aa28.66■■■□□ 2.18
SFXN1-203ENST00000502393 USP32Q8NFA0 1604 aa28.66■■■□□ 2.18
SFXN1-203ENST00000502393 ATRNO75882 1429 aa28.64■■■□□ 2.18
SFXN1-203ENST00000502393 WASLO00401 505 aaPredicted RBP28.64■■■□□ 2.18
SFXN1-203ENST00000502393 PMFBP1Q8TBY8 1022 aa28.64■■■□□ 2.18
SFXN1-203ENST00000502393 BCL9LQ86UU0 1499 aa28.63■■■□□ 2.17
SFXN1-203ENST00000502393 TULP4Q9NRJ4 1543 aa28.62■■■□□ 2.17
SFXN1-203ENST00000502393 ARHGEF10O15013 1369 aa28.61■■■□□ 2.17
SFXN1-203ENST00000502393 ARHGEF28Q8N1W1 1705 aaKnown RBP28.6■■■□□ 2.17
SFXN1-203ENST00000502393 KIAA1210Q9ULL0 1709 aa28.59■■■□□ 2.17
SFXN1-203ENST00000502393 PRR36Q9H6K5 1346 aa28.59■■■□□ 2.17
SFXN1-203ENST00000502393 HAP1P54257 671 aaPredicted RBP28.58■■■□□ 2.17
SFXN1-203ENST00000502393 LMOD2Q6P5Q4 547 aa28.57■■■□□ 2.16
SFXN1-203ENST00000502393 SLIT2O94813 1529 aa28.56■■■□□ 2.16
SFXN1-203ENST00000502393 GPRASP1Q5JY77 1395 aa28.56■■■□□ 2.16
SFXN1-203ENST00000502393 UNC5CLQ8IV45 518 aa28.55■■■□□ 2.16
SFXN1-203ENST00000502393 CABLES1Q8TDN4 633 aa28.55■■■□□ 2.16
SFXN1-203ENST00000502393 GJD4Q96KN9 370 aaPredicted RBP28.54■■■□□ 2.16
SFXN1-203ENST00000502393 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.53■■■□□ 2.16
SFXN1-203ENST00000502393 NGDNQ8NEJ9 315 aaKnown RBP28.52■■■□□ 2.16
SFXN1-203ENST00000502393 NBPF1Q3BBV0 1214 aa28.51■■■□□ 2.15
SFXN1-203ENST00000502393 NUDT16Q96DE0 195 aaKnown RBP28.51■■■□□ 2.15
SFXN1-203ENST00000502393 TRPM3Q9HCF6 1732 aaPredicted RBP28.51■■■□□ 2.15
SFXN1-203ENST00000502393 ATAD2Q6PL18 1390 aa28.5■■■□□ 2.15
SFXN1-203ENST00000502393 ATP7BP35670 1465 aa28.49■■■□□ 2.15
SFXN1-203ENST00000502393 PLEKHG5O94827 1062 aa28.49■■■□□ 2.15
SFXN1-203ENST00000502393 CDK19Q9BWU1 502 aa28.49■■■□□ 2.15
SFXN1-203ENST00000502393 ABCA3Q99758 1704 aa28.48■■■□□ 2.15
SFXN1-203ENST00000502393 ITSN1Q15811 1721 aa28.47■■■□□ 2.15
SFXN1-203ENST00000502393 ALS2Q96Q42 1657 aa28.46■■■□□ 2.15
SFXN1-203ENST00000502393 L3MBTL2Q969R5 705 aa28.46■■■□□ 2.15
SFXN1-203ENST00000502393 RALGAPBQ86X10 1494 aa28.45■■■□□ 2.14
SFXN1-203ENST00000502393 PAK3O75914 559 aaPredicted RBP28.43■■■□□ 2.14
SFXN1-203ENST00000502393 NWD2Q9ULI1 1742 aa28.43■■■□□ 2.14
SFXN1-203ENST00000502393 FAM83GA6ND36 823 aa28.42■■■□□ 2.14
SFXN1-203ENST00000502393 VPS72Q15906 364 aa28.42■■■□□ 2.14
SFXN1-203ENST00000502393 SIN3AQ96ST3 1273 aa28.42■■■□□ 2.14
SFXN1-203ENST00000502393 CCDC61Q9Y6R9 512 aa28.42■■■□□ 2.14
SFXN1-203ENST00000502393 GLI3P10071 1580 aa28.41■■■□□ 2.14
SFXN1-203ENST00000502393 PLCH1Q4KWH8 1693 aa28.41■■■□□ 2.14
SFXN1-203ENST00000502393 CENPJQ9HC77 1338 aaPredicted RBP28.41■■■□□ 2.14
SFXN1-203ENST00000502393 POLR3AO14802 1390 aaPredicted RBP28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms