RNA–Protein interactions for RNA: ENST00000499045.2

CHFR-206, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 505 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-206ENST00000499045 PHLPP1O60346 1717 aa36.51■■■■□ 3.43
CHFR-206ENST00000499045 C1orf167Q5SNV9 1468 aa36.5■■■■□ 3.43
CHFR-206ENST00000499045 PCGF6Q9BYE7 350 aa36.49■■■■□ 3.43
CHFR-206ENST00000499045 PRAM1Q96QH2 718 aa36.48■■■■□ 3.43
CHFR-206ENST00000499045 TRAK1Q9UPV9 953 aa36.47■■■■□ 3.43
CHFR-206ENST00000499045 COL16A1Q07092 1604 aaPredicted RBP36.46■■■■□ 3.43
CHFR-206ENST00000499045 NHSL1Q5SYE7 1610 aa36.41■■■■□ 3.42
CHFR-206ENST00000499045 NBPF1Q3BBV0 1214 aa36.41■■■■□ 3.42
CHFR-206ENST00000499045 POGKQ9P215 609 aa36.41■■■■□ 3.42
CHFR-206ENST00000499045 ARHGEF28Q8N1W1 1705 aaKnown RBP36.39■■■■□ 3.42
CHFR-206ENST00000499045 FMN2Q9NZ56 1722 aa36.39■■■■□ 3.42
CHFR-206ENST00000499045 SAFB2Q14151 953 aaKnown RBP eCLIP36.38■■■■□ 3.41
CHFR-206ENST00000499045 ORAI2Q96SN7 254 aa36.38■■■■□ 3.41
CHFR-206ENST00000499045 ADGRB2O60241 1585 aa36.36■■■■□ 3.41
CHFR-206ENST00000499045 MED1Q15648 1581 aaPredicted RBP36.36■■■■□ 3.41
CHFR-206ENST00000499045 TRPM1Q7Z4N2 1603 aa36.34■■■■□ 3.41
CHFR-206ENST00000499045 JCADQ9P266 1359 aa36.32■■■■□ 3.4
CHFR-206ENST00000499045 DISP3Q9P2K9 1392 aa36.31■■■■□ 3.4
CHFR-206ENST00000499045 TONSLQ96HA7 1378 aa36.3■■■■□ 3.4
CHFR-206ENST00000499045 DDX17Q92841 729 aaKnown RBP36.3■■■■□ 3.4
CHFR-206ENST00000499045 NUTM2FA1L443 756 aa36.29■■■■□ 3.4
CHFR-206ENST00000499045 ESCO1Q5FWF5 840 aa36.28■■■■□ 3.4
CHFR-206ENST00000499045 NBPF8Q3BBV2 869 aa36.27■■■■□ 3.4
CHFR-206ENST00000499045 MINK1Q8N4C8 1332 aaPredicted RBP36.26■■■■□ 3.39
CHFR-206ENST00000499045 SHPRHQ149N8 1683 aa36.24■■■■□ 3.39
CHFR-206ENST00000499045 HIRIP3Q9BW71 556 aaPredicted RBP36.24■■■■□ 3.39
CHFR-206ENST00000499045 SOS2Q07890 1332 aaPredicted RBP36.23■■■■□ 3.39
CHFR-206ENST00000499045 RGPD8O14715 1765 aaPredicted RBP36.22■■■■□ 3.39
CHFR-206ENST00000499045 ANKARQ7Z5J8 1434 aa36.21■■■■□ 3.39
CHFR-206ENST00000499045 USP32Q8NFA0 1604 aa36.21■■■■□ 3.39
CHFR-206ENST00000499045 LRRC59Q96AG4 307 aaKnown RBP36.2■■■■□ 3.39
CHFR-206ENST00000499045 CLSPNQ9HAW4 1339 aa36.19■■■■□ 3.38
CHFR-206ENST00000499045 WASLO00401 505 aaPredicted RBP36.19■■■■□ 3.38
CHFR-206ENST00000499045 KIF1AQ12756 1690 aa36.19■■■■□ 3.38
CHFR-206ENST00000499045 ROCK2O75116 1388 aaKnown RBP36.18■■■■□ 3.38
CHFR-206ENST00000499045 GPRASP1Q5JY77 1395 aa36.17■■■■□ 3.38
CHFR-206ENST00000499045 NPHP3Q7Z494 1330 aa36.17■■■■□ 3.38
CHFR-206ENST00000499045 SPATA31A6Q5VVP1 1343 aa36.16■■■■□ 3.38
CHFR-206ENST00000499045 EIF3AQ14152 1382 aaKnown RBP36.15■■■■□ 3.38
CHFR-206ENST00000499045 TULP4Q9NRJ4 1543 aa36.15■■■■□ 3.38
CHFR-206ENST00000499045 FOXO3O43524 673 aa36.15■■■■□ 3.38
CHFR-206ENST00000499045 PXDNQ92626 1479 aa36.15■■■■□ 3.38
CHFR-206ENST00000499045 CENPJQ9HC77 1338 aaPredicted RBP36.13■■■■□ 3.37
CHFR-206ENST00000499045 PRR36Q9H6K5 1346 aa36.12■■■■□ 3.37
CHFR-206ENST00000499045 PHF8Q9UPP1 1060 aa36.12■■■■□ 3.37
CHFR-206ENST00000499045 PNPLA6Q8IY17 1366 aa36.12■■■■□ 3.37
CHFR-206ENST00000499045 RALGAPBQ86X10 1494 aa36.11■■■■□ 3.37
CHFR-206ENST00000499045 LRP6O75581 1613 aa36.09■■■■□ 3.37
CHFR-206ENST00000499045 QRICH2Q9H0J4 1663 aa36.08■■■■□ 3.37
CHFR-206ENST00000499045 XPCQ01831 940 aaPredicted RBP36.06■■■■□ 3.36
CHFR-206ENST00000499045 ATP7BP35670 1465 aa36.05■■■■□ 3.36
CHFR-206ENST00000499045 CDK19Q9BWU1 502 aa36.05■■■■□ 3.36
CHFR-206ENST00000499045 PHF23Q9BUL5 403 aaPredicted RBP36.04■■■■□ 3.36
CHFR-206ENST00000499045 TIMELESSQ9UNS1 1208 aa36.02■■■■□ 3.36
CHFR-206ENST00000499045 PMFBP1Q8TBY8 1022 aa36.01■■■■□ 3.36
CHFR-206ENST00000499045 KRT28Q7Z3Y7 464 aa36■■■■□ 3.35
CHFR-206ENST00000499045 NUDT16Q96DE0 195 aaKnown RBP36■■■■□ 3.35
CHFR-206ENST00000499045 CARD11Q9BXL7 1154 aa36■■■■□ 3.35
CHFR-206ENST00000499045 RGS17Q9UGC6 210 aaPredicted RBP36■■■■□ 3.35
CHFR-206ENST00000499045 COL22A1Q8NFW1 1626 aaPredicted RBP36■■■■□ 3.35
CHFR-206ENST00000499045 ILDR2Q71H61 639 aa35.99■■■■□ 3.35
CHFR-206ENST00000499045 ITSN1Q15811 1721 aa35.99■■■■□ 3.35
CHFR-206ENST00000499045 CCER1Q8TC90 406 aaPredicted RBP35.97■■■■□ 3.35
CHFR-206ENST00000499045 TOPAZ1Q8N9V7 1692 aa35.97■■■■□ 3.35
CHFR-206ENST00000499045 NUTM2BA6NNL0 878 aaPredicted RBP35.96■■■■□ 3.35
CHFR-206ENST00000499045 NUTM2EB1AL46 878 aaPredicted RBP35.96■■■■□ 3.35
CHFR-206ENST00000499045 NUTM2AQ8IVF1 878 aaPredicted RBP35.96■■■■□ 3.35
CHFR-206ENST00000499045 SPATA31A3Q5VYP0 1347 aa35.96■■■■□ 3.35
CHFR-206ENST00000499045 PSME1Q06323 249 aa35.93■■■■□ 3.34
CHFR-206ENST00000499045 SBNO1A3KN83 1393 aa35.92■■■■□ 3.34
CHFR-206ENST00000499045 CCDC61Q9Y6R9 512 aa35.92■■■■□ 3.34
CHFR-206ENST00000499045 TNS3Q68CZ2 1445 aa35.9■■■■□ 3.34
CHFR-206ENST00000499045 SRPK2P78362 688 aaKnown RBP35.89■■■■□ 3.34
CHFR-206ENST00000499045 MEX3CQ5U5Q3 659 aaKnown RBP35.89■■■■□ 3.34
CHFR-206ENST00000499045 CABP2Q9NPB3 220 aa35.89■■■■□ 3.34
CHFR-206ENST00000499045 SBNO2Q9Y2G9 1366 aa35.89■■■■□ 3.34
CHFR-206ENST00000499045 TRPM3Q9HCF6 1732 aaPredicted RBP35.88■■■■□ 3.34
CHFR-206ENST00000499045 NGDNQ8NEJ9 315 aaKnown RBP35.87■■■■□ 3.33
CHFR-206ENST00000499045 EVC2Q86UK5 1308 aa35.86■■■■□ 3.33
CHFR-206ENST00000499045 PLEKHG3A1L390 1219 aa35.86■■■■□ 3.33
CHFR-206ENST00000499045 POLR3AO14802 1390 aaPredicted RBP35.86■■■■□ 3.33
CHFR-206ENST00000499045 PPIP5K1Q6PFW1 1433 aa35.81■■■■□ 3.32
CHFR-206ENST00000499045 ARHGEF10O15013 1369 aa35.8■■■■□ 3.32
CHFR-206ENST00000499045 POTEAQ6S8J7 498 aa35.8■■■■□ 3.32
CHFR-206ENST00000499045 ALS2Q96Q42 1657 aa35.8■■■■□ 3.32
CHFR-206ENST00000499045 ACEP12821 1306 aa35.8■■■■□ 3.32
CHFR-206ENST00000499045 ADAMTS2O95450 1211 aa35.79■■■■□ 3.32
CHFR-206ENST00000499045 C8orf37Q96NL8 207 aa35.75■■■■□ 3.31
CHFR-206ENST00000499045 ZNF772Q68DY9 489 aaPredicted RBP35.74■■■■□ 3.31
CHFR-206ENST00000499045 LMOD2Q6P5Q4 547 aa35.73■■■■□ 3.31
CHFR-206ENST00000499045 CABP1Q9NZU7 370 aa35.73■■■■□ 3.31
CHFR-206ENST00000499045 MARF1Q9Y4F3 1742 aaKnown RBP35.73■■■■□ 3.31
CHFR-206ENST00000499045 AFF2P51816 1311 aa35.73■■■■□ 3.31
CHFR-206ENST00000499045 ST20-MTHFSA0A0A6YYL1 179 aa35.71■■■■□ 3.31
CHFR-206ENST00000499045 TESK2Q96S53 571 aa35.71■■■■□ 3.31
CHFR-206ENST00000499045 ABCA3Q99758 1704 aa35.71■■■■□ 3.31
CHFR-206ENST00000499045 ATAD2Q6PL18 1390 aa35.69■■■■□ 3.3
CHFR-206ENST00000499045 CABLES1Q8TDN4 633 aa35.69■■■■□ 3.3
CHFR-206ENST00000499045 NGLY1Q96IV0 654 aa35.69■■■■□ 3.3
CHFR-206ENST00000499045 USP47Q96K76 1375 aa35.68■■■■□ 3.3
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms