RNA–Protein interactions for RNA: ENST00000498739.1

PRKCB-210, Transcript of protein kinase C beta, humanhuman

TSL 4

Gene PRKCB, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-210ENST00000498739 SLAIN2Q9P270 581 aa24.02■■□□□ 1.44
PRKCB-210ENST00000498739 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
PRKCB-210ENST00000498739 POGKQ9P215 609 aa24.01■■□□□ 1.43
PRKCB-210ENST00000498739 SAFB2Q14151 953 aaKnown RBP eCLIP24■■□□□ 1.434e-7■■■■□ 20.4
PRKCB-210ENST00000498739 NBPF8Q3BBV2 869 aa24■■□□□ 1.43
PRKCB-210ENST00000498739 ROCK2O75116 1388 aaKnown RBP23.97■■□□□ 1.43
PRKCB-210ENST00000498739 MST1RQ04912 1400 aa23.97■■□□□ 1.43
PRKCB-210ENST00000498739 ROBO1Q9Y6N7 1651 aa23.97■■□□□ 1.43
PRKCB-210ENST00000498739 ARHGEF28Q8N1W1 1705 aaKnown RBP23.96■■□□□ 1.43
PRKCB-210ENST00000498739 CDC42BPGQ6DT37 1551 aa23.96■■□□□ 1.43
PRKCB-210ENST00000498739 HSPA1LP34931 641 aa23.93■■□□□ 1.42
PRKCB-210ENST00000498739 TIMELESSQ9UNS1 1208 aa23.93■■□□□ 1.42
PRKCB-210ENST00000498739 C1orf167Q5SNV9 1468 aa23.91■■□□□ 1.42
PRKCB-210ENST00000498739 RALGAPBQ86X10 1494 aa23.91■■□□□ 1.42
PRKCB-210ENST00000498739 MINK1Q8N4C8 1332 aaPredicted RBP23.9■■□□□ 1.42
PRKCB-210ENST00000498739 NUTM2FA1L443 756 aa23.89■■□□□ 1.41
PRKCB-210ENST00000498739 BRINP3Q76B58 766 aa23.89■■□□□ 1.41
PRKCB-210ENST00000498739 HIRIP3Q9BW71 556 aaPredicted RBP23.89■■□□□ 1.41
PRKCB-210ENST00000498739 ADGRB2O60241 1585 aa23.88■■□□□ 1.41
PRKCB-210ENST00000498739 GPRASP1Q5JY77 1395 aa23.88■■□□□ 1.41
PRKCB-210ENST00000498739 CARD11Q9BXL7 1154 aa23.87■■□□□ 1.41
PRKCB-210ENST00000498739 FMN2Q9NZ56 1722 aa23.87■■□□□ 1.41
PRKCB-210ENST00000498739 CENPJQ9HC77 1338 aaPredicted RBP23.85■■□□□ 1.41
PRKCB-210ENST00000498739 ORAI2Q96SN7 254 aa23.84■■□□□ 1.41
PRKCB-210ENST00000498739 EIF3AQ14152 1382 aaKnown RBP23.82■■□□□ 1.4
PRKCB-210ENST00000498739 ESCO1Q5FWF5 840 aa23.82■■□□□ 1.4
PRKCB-210ENST00000498739 PHLPP1O60346 1717 aa23.81■■□□□ 1.4
PRKCB-210ENST00000498739 WASLO00401 505 aaPredicted RBP23.81■■□□□ 1.4
PRKCB-210ENST00000498739 AHDC1Q5TGY3 1603 aaPredicted RBP23.81■■□□□ 1.4
PRKCB-210ENST00000498739 QRICH2Q9H0J4 1663 aa23.8■■□□□ 1.4
PRKCB-210ENST00000498739 DDX17Q92841 729 aaKnown RBP23.78■■□□□ 1.4
PRKCB-210ENST00000498739 NHSL1Q5SYE7 1610 aa23.77■■□□□ 1.4
PRKCB-210ENST00000498739 ANKARQ7Z5J8 1434 aa23.77■■□□□ 1.4
PRKCB-210ENST00000498739 TULP4Q9NRJ4 1543 aa23.77■■□□□ 1.4
PRKCB-210ENST00000498739 COL16A1Q07092 1604 aaPredicted RBP23.76■■□□□ 1.39
PRKCB-210ENST00000498739 USP32Q8NFA0 1604 aa23.76■■□□□ 1.39
PRKCB-210ENST00000498739 CDK19Q9BWU1 502 aa23.75■■□□□ 1.39
PRKCB-210ENST00000498739 PRR36Q9H6K5 1346 aa23.73■■□□□ 1.39
PRKCB-210ENST00000498739 KIF1AQ12756 1690 aa23.73■■□□□ 1.39
PRKCB-210ENST00000498739 RGPD8O14715 1765 aaPredicted RBP23.73■■□□□ 1.39
PRKCB-210ENST00000498739 FOXO3O43524 673 aa23.71■■□□□ 1.39
PRKCB-210ENST00000498739 PHF8Q9UPP1 1060 aa23.71■■□□□ 1.39
PRKCB-210ENST00000498739 ATP7BP35670 1465 aa23.7■■□□□ 1.38
PRKCB-210ENST00000498739 NPHP3Q7Z494 1330 aa23.7■■□□□ 1.38
PRKCB-210ENST00000498739 SRPK2P78362 688 aaKnown RBP23.7■■□□□ 1.38
PRKCB-210ENST00000498739 PMFBP1Q8TBY8 1022 aa23.69■■□□□ 1.38
PRKCB-210ENST00000498739 NUDT16Q96DE0 195 aaKnown RBP23.69■■□□□ 1.38
PRKCB-210ENST00000498739 EVC2Q86UK5 1308 aa23.68■■□□□ 1.38
PRKCB-210ENST00000498739 USP47Q96K76 1375 aa23.67■■□□□ 1.38
PRKCB-210ENST00000498739 JCADQ9P266 1359 aa23.67■■□□□ 1.38
PRKCB-210ENST00000498739 SOS2Q07890 1332 aaPredicted RBP23.67■■□□□ 1.38
PRKCB-210ENST00000498739 XPCQ01831 940 aaPredicted RBP23.67■■□□□ 1.38
PRKCB-210ENST00000498739 CABP2Q9NPB3 220 aa23.67■■□□□ 1.38
PRKCB-210ENST00000498739 SBNO2Q9Y2G9 1366 aa23.66■■□□□ 1.38
PRKCB-210ENST00000498739 LRRC59Q96AG4 307 aaKnown RBP23.66■■□□□ 1.38
PRKCB-210ENST00000498739 ITSN1Q15811 1721 aa23.65■■□□□ 1.38
PRKCB-210ENST00000498739 PXDNQ92626 1479 aa23.65■■□□□ 1.38
PRKCB-210ENST00000498739 ST20-MTHFSA0A0A6YYL1 179 aa23.65■■□□□ 1.38
PRKCB-210ENST00000498739 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
PRKCB-210ENST00000498739 TOPAZ1Q8N9V7 1692 aa23.63■■□□□ 1.37
PRKCB-210ENST00000498739 KRT28Q7Z3Y7 464 aa23.62■■□□□ 1.37
PRKCB-210ENST00000498739 SHPRHQ149N8 1683 aa23.61■■□□□ 1.37
PRKCB-210ENST00000498739 PSME1Q06323 249 aa23.61■■□□□ 1.37
PRKCB-210ENST00000498739 NGDNQ8NEJ9 315 aaKnown RBP23.61■■□□□ 1.37
PRKCB-210ENST00000498739 PPIP5K1Q6PFW1 1433 aa23.59■■□□□ 1.37
PRKCB-210ENST00000498739 PNPLA6Q8IY17 1366 aa23.59■■□□□ 1.37
PRKCB-210ENST00000498739 MED1Q15648 1581 aaPredicted RBP23.59■■□□□ 1.37
PRKCB-210ENST00000498739 TESK2Q96S53 571 aa23.58■■□□□ 1.37
PRKCB-210ENST00000498739 SPATA31A6Q5VVP1 1343 aa23.57■■□□□ 1.36
PRKCB-210ENST00000498739 PLEKHG3A1L390 1219 aa23.56■■□□□ 1.36
PRKCB-210ENST00000498739 ACEP12821 1306 aa23.56■■□□□ 1.36
PRKCB-210ENST00000498739 ATAD2Q6PL18 1390 aa23.55■■□□□ 1.36
PRKCB-210ENST00000498739 CABP1Q9NZU7 370 aa23.55■■□□□ 1.36
PRKCB-210ENST00000498739 SPATA31A3Q5VYP0 1347 aa23.55■■□□□ 1.36
PRKCB-210ENST00000498739 POLR3AO14802 1390 aaPredicted RBP23.54■■□□□ 1.36
PRKCB-210ENST00000498739 SLC24A1O60721 1099 aa23.54■■□□□ 1.36
PRKCB-210ENST00000498739 SBNO1A3KN83 1393 aa23.53■■□□□ 1.36
PRKCB-210ENST00000498739 TNS3Q68CZ2 1445 aa23.53■■□□□ 1.36
PRKCB-210ENST00000498739 NUTM2BA6NNL0 878 aaPredicted RBP23.53■■□□□ 1.36
PRKCB-210ENST00000498739 NUTM2EB1AL46 878 aaPredicted RBP23.53■■□□□ 1.36
PRKCB-210ENST00000498739 NUTM2AQ8IVF1 878 aaPredicted RBP23.53■■□□□ 1.36
PRKCB-210ENST00000498739 EIF4G2P78344 907 aaKnown RBP eCLIP23.52■■□□□ 1.362e-7■■■■□ 19.3
PRKCB-210ENST00000498739 LRP6O75581 1613 aa23.51■■□□□ 1.35
PRKCB-210ENST00000498739 TMF1P82094 1093 aa23.51■■□□□ 1.35
PRKCB-210ENST00000498739 LMOD2Q6P5Q4 547 aa23.51■■□□□ 1.35
PRKCB-210ENST00000498739 TRPM3Q9HCF6 1732 aaPredicted RBP23.5■■□□□ 1.35
PRKCB-210ENST00000498739 COL22A1Q8NFW1 1626 aaPredicted RBP23.5■■□□□ 1.35
PRKCB-210ENST00000498739 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
PRKCB-210ENST00000498739 PAK3O75914 559 aaPredicted RBP23.49■■□□□ 1.35
PRKCB-210ENST00000498739 HSPA5P11021 654 aaKnown RBP23.49■■□□□ 1.35
PRKCB-210ENST00000498739 MEX3CQ5U5Q3 659 aaKnown RBP23.48■■□□□ 1.35
PRKCB-210ENST00000498739 TMC1Q8TDI8 760 aa23.47■■□□□ 1.35
PRKCB-210ENST00000498739 PUS7Q96PZ0 661 aaKnown RBP23.47■■□□□ 1.35
PRKCB-210ENST00000498739 PHF23Q9BUL5 403 aaPredicted RBP23.47■■□□□ 1.35
PRKCB-210ENST00000498739 ARHGEF10O15013 1369 aa23.47■■□□□ 1.35
PRKCB-210ENST00000498739 PLEKHG5O94827 1062 aa23.45■■□□□ 1.34
PRKCB-210ENST00000498739 ALS2Q96Q42 1657 aa23.44■■□□□ 1.34
PRKCB-210ENST00000498739 USP6P35125 1406 aa23.43■■□□□ 1.34
PRKCB-210ENST00000498739 ADAMTS2O95450 1211 aa23.42■■□□□ 1.34
PRKCB-210ENST00000498739 CDCA8Q53HL2 280 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms