RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 SAFB2Q14151 953 aaKnown RBP eCLIP23.07■■□□□ 1.28
LMNA-217ENST00000498722 DLC1Q96QB1 1528 aa23.07■■□□□ 1.28
LMNA-217ENST00000498722 FAM135BQ49AJ0 1406 aa23.06■■□□□ 1.28
LMNA-217ENST00000498722 POGKQ9P215 609 aa23.06■■□□□ 1.28
LMNA-217ENST00000498722 HSPA1LP34931 641 aa23.05■■□□□ 1.28
LMNA-217ENST00000498722 PRAM1Q96QH2 718 aa23.05■■□□□ 1.28
LMNA-217ENST00000498722 PHLPP1O60346 1717 aa23.04■■□□□ 1.28
LMNA-217ENST00000498722 CDC42BPGQ6DT37 1551 aa23.04■■□□□ 1.28
LMNA-217ENST00000498722 DISP3Q9P2K9 1392 aa23.03■■□□□ 1.28
LMNA-217ENST00000498722 NBPF1Q3BBV0 1214 aa23.03■■□□□ 1.28
LMNA-217ENST00000498722 MST1RQ04912 1400 aa23.02■■□□□ 1.28
LMNA-217ENST00000498722 RGPD8O14715 1765 aaPredicted RBP23.01■■□□□ 1.27
LMNA-217ENST00000498722 FMN2Q9NZ56 1722 aa23.01■■□□□ 1.27
LMNA-217ENST00000498722 SIRT1Q96EB6 747 aa23.01■■□□□ 1.27
LMNA-217ENST00000498722 TIMELESSQ9UNS1 1208 aa23■■□□□ 1.27
LMNA-217ENST00000498722 ROCK2O75116 1388 aaKnown RBP22.98■■□□□ 1.27
LMNA-217ENST00000498722 NUTM2FA1L443 756 aa22.96■■□□□ 1.27
LMNA-217ENST00000498722 C1orf167Q5SNV9 1468 aa22.96■■□□□ 1.27
LMNA-217ENST00000498722 QRICH2Q9H0J4 1663 aa22.96■■□□□ 1.27
LMNA-217ENST00000498722 MINK1Q8N4C8 1332 aaPredicted RBP22.95■■□□□ 1.27
LMNA-217ENST00000498722 NBPF8Q3BBV2 869 aa22.95■■□□□ 1.26
LMNA-217ENST00000498722 ADGRB2O60241 1585 aa22.94■■□□□ 1.26
LMNA-217ENST00000498722 BRINP3Q76B58 766 aa22.94■■□□□ 1.26
LMNA-217ENST00000498722 HIRIP3Q9BW71 556 aaPredicted RBP22.94■■□□□ 1.26
LMNA-217ENST00000498722 NHSL1Q5SYE7 1610 aa22.94■■□□□ 1.26
LMNA-217ENST00000498722 AHDC1Q5TGY3 1603 aaPredicted RBP22.91■■□□□ 1.26
LMNA-217ENST00000498722 COL16A1Q07092 1604 aaPredicted RBP22.91■■□□□ 1.26
LMNA-217ENST00000498722 ESCO1Q5FWF5 840 aa22.89■■□□□ 1.26
LMNA-217ENST00000498722 ORAI2Q96SN7 254 aa22.89■■□□□ 1.26
LMNA-217ENST00000498722 RALGAPBQ86X10 1494 aa22.89■■□□□ 1.25
LMNA-217ENST00000498722 ILDR2Q71H61 639 aa22.88■■□□□ 1.25
LMNA-217ENST00000498722 KIF1AQ12756 1690 aa22.88■■□□□ 1.25
LMNA-217ENST00000498722 CENPJQ9HC77 1338 aaPredicted RBP22.87■■□□□ 1.25
LMNA-217ENST00000498722 ITSN1Q15811 1721 aa22.87■■□□□ 1.25
LMNA-217ENST00000498722 USP32Q8NFA0 1604 aa22.86■■□□□ 1.25
LMNA-217ENST00000498722 DDX17Q92841 729 aaKnown RBP22.85■■□□□ 1.25
LMNA-217ENST00000498722 CARD11Q9BXL7 1154 aa22.85■■□□□ 1.25
LMNA-217ENST00000498722 EIF3AQ14152 1382 aaKnown RBP22.85■■□□□ 1.25
LMNA-217ENST00000498722 WASLO00401 505 aaPredicted RBP22.82■■□□□ 1.24
LMNA-217ENST00000498722 GPRASP1Q5JY77 1395 aa22.82■■□□□ 1.24
LMNA-217ENST00000498722 TULP4Q9NRJ4 1543 aa22.82■■□□□ 1.24
LMNA-217ENST00000498722 SHPRHQ149N8 1683 aa22.81■■□□□ 1.24
LMNA-217ENST00000498722 ANKARQ7Z5J8 1434 aa22.8■■□□□ 1.24
LMNA-217ENST00000498722 FOXO3O43524 673 aa22.79■■□□□ 1.24
LMNA-217ENST00000498722 MED1Q15648 1581 aaPredicted RBP22.79■■□□□ 1.24
LMNA-217ENST00000498722 JCADQ9P266 1359 aa22.78■■□□□ 1.24
LMNA-217ENST00000498722 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
LMNA-217ENST00000498722 CDK19Q9BWU1 502 aa22.78■■□□□ 1.24
LMNA-217ENST00000498722 XPCQ01831 940 aaPredicted RBP22.77■■□□□ 1.24
LMNA-217ENST00000498722 PHF8Q9UPP1 1060 aa22.77■■□□□ 1.24
LMNA-217ENST00000498722 ZNF316A6NFI3 1004 aaPredicted RBP22.76■■□□□ 1.23
LMNA-217ENST00000498722 SRPK2P78362 688 aaKnown RBP22.76■■□□□ 1.23
LMNA-217ENST00000498722 TOPAZ1Q8N9V7 1692 aa22.75■■□□□ 1.23
LMNA-217ENST00000498722 PMFBP1Q8TBY8 1022 aa22.75■■□□□ 1.23
LMNA-217ENST00000498722 LRRC59Q96AG4 307 aaKnown RBP22.75■■□□□ 1.23
LMNA-217ENST00000498722 PRR36Q9H6K5 1346 aa22.74■■□□□ 1.23
LMNA-217ENST00000498722 ATP7BP35670 1465 aa22.74■■□□□ 1.23
LMNA-217ENST00000498722 NUDT16Q96DE0 195 aaKnown RBP22.73■■□□□ 1.23
LMNA-217ENST00000498722 PXDNQ92626 1479 aa22.72■■□□□ 1.23
LMNA-217ENST00000498722 SOCS7O14512 581 aa22.72■■□□□ 1.23
LMNA-217ENST00000498722 SOS2Q07890 1332 aaPredicted RBP22.71■■□□□ 1.23
LMNA-217ENST00000498722 EVC2Q86UK5 1308 aa22.71■■□□□ 1.23
LMNA-217ENST00000498722 PSME1Q06323 249 aa22.7■■□□□ 1.22
LMNA-217ENST00000498722 CABP2Q9NPB3 220 aa22.7■■□□□ 1.22
LMNA-217ENST00000498722 KRT28Q7Z3Y7 464 aa22.68■■□□□ 1.22
LMNA-217ENST00000498722 NGDNQ8NEJ9 315 aaKnown RBP22.68■■□□□ 1.22
LMNA-217ENST00000498722 PNPLA6Q8IY17 1366 aa22.67■■□□□ 1.22
LMNA-217ENST00000498722 NUTM2BA6NNL0 878 aaPredicted RBP22.67■■□□□ 1.22
LMNA-217ENST00000498722 NUTM2EB1AL46 878 aaPredicted RBP22.67■■□□□ 1.22
LMNA-217ENST00000498722 NUTM2AQ8IVF1 878 aaPredicted RBP22.67■■□□□ 1.22
LMNA-217ENST00000498722 PHF23Q9BUL5 403 aaPredicted RBP22.67■■□□□ 1.22
LMNA-217ENST00000498722 SPATA31A6Q5VVP1 1343 aa22.67■■□□□ 1.22
LMNA-217ENST00000498722 USP47Q96K76 1375 aa22.66■■□□□ 1.22
LMNA-217ENST00000498722 TRPM3Q9HCF6 1732 aaPredicted RBP22.65■■□□□ 1.22
LMNA-217ENST00000498722 PPIP5K1Q6PFW1 1433 aa22.65■■□□□ 1.22
LMNA-217ENST00000498722 CCDC61Q9Y6R9 512 aa22.65■■□□□ 1.22
LMNA-217ENST00000498722 SBNO2Q9Y2G9 1366 aa22.65■■□□□ 1.22
LMNA-217ENST00000498722 COL22A1Q8NFW1 1626 aaPredicted RBP22.64■■□□□ 1.22
LMNA-217ENST00000498722 ST20-MTHFSA0A0A6YYL1 179 aa22.64■■□□□ 1.22
LMNA-217ENST00000498722 MEX3CQ5U5Q3 659 aaKnown RBP22.64■■□□□ 1.22
LMNA-217ENST00000498722 LMOD2Q6P5Q4 547 aa22.64■■□□□ 1.22
LMNA-217ENST00000498722 LRP6O75581 1613 aa22.62■■□□□ 1.21
LMNA-217ENST00000498722 TNS3Q68CZ2 1445 aa22.61■■□□□ 1.21
LMNA-217ENST00000498722 PAK3O75914 559 aaPredicted RBP22.6■■□□□ 1.21
LMNA-217ENST00000498722 PLEKHG5O94827 1062 aa22.6■■□□□ 1.21
LMNA-217ENST00000498722 MARF1Q9Y4F3 1742 aaKnown RBP22.6■■□□□ 1.21
LMNA-217ENST00000498722 SPATA31A3Q5VYP0 1347 aa22.6■■□□□ 1.21
LMNA-217ENST00000498722 ALS2Q96Q42 1657 aa22.6■■□□□ 1.21
LMNA-217ENST00000498722 ACEP12821 1306 aa22.59■■□□□ 1.21
LMNA-217ENST00000498722 AKAP12Q02952 1782 aa22.59■■□□□ 1.21
LMNA-217ENST00000498722 SBNO1A3KN83 1393 aa22.58■■□□□ 1.21
LMNA-217ENST00000498722 ATAD2Q6PL18 1390 aa22.57■■□□□ 1.2
LMNA-217ENST00000498722 CABP1Q9NZU7 370 aa22.57■■□□□ 1.2
LMNA-217ENST00000498722 ABCA3Q99758 1704 aa22.57■■□□□ 1.2
LMNA-217ENST00000498722 POLR3AO14802 1390 aaPredicted RBP22.57■■□□□ 1.2
LMNA-217ENST00000498722 PLEKHG3A1L390 1219 aa22.57■■□□□ 1.2
LMNA-217ENST00000498722 ARHGEF10O15013 1369 aa22.56■■□□□ 1.2
LMNA-217ENST00000498722 HAP1P54257 671 aaPredicted RBP22.56■■□□□ 1.2
LMNA-217ENST00000498722 ADAMTS2O95450 1211 aa22.55■■□□□ 1.2
LMNA-217ENST00000498722 TESK2Q96S53 571 aa22.55■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms