RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 ROBO2Q9HCK4 1378 aa18■□□□□ 0.47
TMEM39B-209ENST00000498613 TECPR2O15040 1411 aa17.99■□□□□ 0.47
TMEM39B-209ENST00000498613 SAFB2Q14151 953 aaKnown RBP eCLIP17.99■□□□□ 0.47
TMEM39B-209ENST00000498613 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
TMEM39B-209ENST00000498613 RGS17Q9UGC6 210 aaPredicted RBP17.97■□□□□ 0.47
TMEM39B-209ENST00000498613 SETD1AO15047 1707 aaKnown RBP17.97■□□□□ 0.47
TMEM39B-209ENST00000498613 XRN1Q8IZH2 1706 aaKnown RBP17.96■□□□□ 0.47
TMEM39B-209ENST00000498613 ADGRB1O14514 1584 aa17.95■□□□□ 0.46
TMEM39B-209ENST00000498613 CENPJQ9HC77 1338 aaPredicted RBP17.95■□□□□ 0.46
TMEM39B-209ENST00000498613 DLC1Q96QB1 1528 aa17.94■□□□□ 0.46
TMEM39B-209ENST00000498613 ZEB1P37275 1124 aaPredicted RBP17.94■□□□□ 0.46
TMEM39B-209ENST00000498613 ADGRL3Q9HAR2 1447 aa17.93■□□□□ 0.46
TMEM39B-209ENST00000498613 MINK1Q8N4C8 1332 aaPredicted RBP17.93■□□□□ 0.46
TMEM39B-209ENST00000498613 GPRASP1Q5JY77 1395 aa17.92■□□□□ 0.46
TMEM39B-209ENST00000498613 DCCP43146 1447 aa17.92■□□□□ 0.46
TMEM39B-209ENST00000498613 RALGAPBQ86X10 1494 aa17.92■□□□□ 0.46
TMEM39B-209ENST00000498613 ASXL1Q8IXJ9 1541 aa17.92■□□□□ 0.46
TMEM39B-209ENST00000498613 TRPM1Q7Z4N2 1603 aa17.9■□□□□ 0.46
TMEM39B-209ENST00000498613 PLEKHH1Q9ULM0 1364 aa17.9■□□□□ 0.46
TMEM39B-209ENST00000498613 KNDC1Q76NI1 1749 aa17.89■□□□□ 0.46
TMEM39B-209ENST00000498613 WASLO00401 505 aaPredicted RBP17.89■□□□□ 0.45
TMEM39B-209ENST00000498613 HIRIP3Q9BW71 556 aaPredicted RBP17.89■□□□□ 0.45
TMEM39B-209ENST00000498613 EVC2Q86UK5 1308 aa17.88■□□□□ 0.45
TMEM39B-209ENST00000498613 EIF4G2P78344 907 aaKnown RBP eCLIP17.87■□□□□ 0.45
TMEM39B-209ENST00000498613 SRPK2P78362 688 aaKnown RBP17.87■□□□□ 0.45
TMEM39B-209ENST00000498613 ESCO1Q5FWF5 840 aa17.87■□□□□ 0.45
TMEM39B-209ENST00000498613 CDK19Q9BWU1 502 aa17.87■□□□□ 0.45
TMEM39B-209ENST00000498613 ROBO1Q9Y6N7 1651 aa17.86■□□□□ 0.45
TMEM39B-209ENST00000498613 ST20-MTHFSA0A0A6YYL1 179 aa17.85■□□□□ 0.45
TMEM39B-209ENST00000498613 NUTM2FA1L443 756 aa17.85■□□□□ 0.45
TMEM39B-209ENST00000498613 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.84■□□□□ 0.45
TMEM39B-209ENST00000498613 CDCA8Q53HL2 280 aa17.84■□□□□ 0.45
TMEM39B-209ENST00000498613 USP47Q96K76 1375 aa17.82■□□□□ 0.44
TMEM39B-209ENST00000498613 TMF1P82094 1093 aa17.82■□□□□ 0.44
TMEM39B-209ENST00000498613 POTEAQ6S8J7 498 aa17.82■□□□□ 0.44
TMEM39B-209ENST00000498613 NUDT16Q96DE0 195 aaKnown RBP17.81■□□□□ 0.44
TMEM39B-209ENST00000498613 CCDC61Q9Y6R9 512 aa17.81■□□□□ 0.44
TMEM39B-209ENST00000498613 BRINP3Q76B58 766 aa17.8■□□□□ 0.44
TMEM39B-209ENST00000498613 ARHGEF28Q8N1W1 1705 aaKnown RBP17.8■□□□□ 0.44
TMEM39B-209ENST00000498613 ORAI2Q96SN7 254 aa17.79■□□□□ 0.44
TMEM39B-209ENST00000498613 PHF8Q9UPP1 1060 aa17.79■□□□□ 0.44
TMEM39B-209ENST00000498613 C1orf167Q5SNV9 1468 aa17.79■□□□□ 0.44
TMEM39B-209ENST00000498613 MST1RQ04912 1400 aa17.79■□□□□ 0.44
TMEM39B-209ENST00000498613 CDC42BPGQ6DT37 1551 aa17.79■□□□□ 0.44
TMEM39B-209ENST00000498613 PSME1Q06323 249 aa17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 NGDNQ8NEJ9 315 aaKnown RBP17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 PUS7Q96PZ0 661 aaKnown RBP17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 NALCNQ8IZF0 1738 aa17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 SBNO2Q9Y2G9 1366 aa17.78■□□□□ 0.44
TMEM39B-209ENST00000498613 ANKARQ7Z5J8 1434 aa17.77■□□□□ 0.44
TMEM39B-209ENST00000498613 NPHP3Q7Z494 1330 aa17.76■□□□□ 0.43
TMEM39B-209ENST00000498613 PHLPP1O60346 1717 aa17.75■□□□□ 0.43
TMEM39B-209ENST00000498613 FOXO3O43524 673 aa17.75■□□□□ 0.43
TMEM39B-209ENST00000498613 HSPA5P11021 654 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-209ENST00000498613 LRRC59Q96AG4 307 aaKnown RBP17.75■□□□□ 0.43
TMEM39B-209ENST00000498613 PMFBP1Q8TBY8 1022 aa17.74■□□□□ 0.43
TMEM39B-209ENST00000498613 ADGRB2O60241 1585 aa17.74■□□□□ 0.43
TMEM39B-209ENST00000498613 TMC1Q8TDI8 760 aa17.73■□□□□ 0.43
TMEM39B-209ENST00000498613 TESK2Q96S53 571 aa17.73■□□□□ 0.43
TMEM39B-209ENST00000498613 ATAD2Q6PL18 1390 aa17.73■□□□□ 0.43
TMEM39B-209ENST00000498613 QRICH2Q9H0J4 1663 aa17.73■□□□□ 0.43
TMEM39B-209ENST00000498613 PLEKHG3A1L390 1219 aa17.72■□□□□ 0.43
TMEM39B-209ENST00000498613 ZNF692Q9BU19 519 aaPredicted RBP17.72■□□□□ 0.43
TMEM39B-209ENST00000498613 KRT28Q7Z3Y7 464 aa17.71■□□□□ 0.43
TMEM39B-209ENST00000498613 CABP1Q9NZU7 370 aa17.71■□□□□ 0.43
TMEM39B-209ENST00000498613 TULP4Q9NRJ4 1543 aa17.71■□□□□ 0.43
TMEM39B-209ENST00000498613 FMN2Q9NZ56 1722 aa17.7■□□□□ 0.42
TMEM39B-209ENST00000498613 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
TMEM39B-209ENST00000498613 POLR3GLQ9BT43 218 aa17.69■□□□□ 0.42
TMEM39B-209ENST00000498613 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
TMEM39B-209ENST00000498613 PRR36Q9H6K5 1346 aa17.69■□□□□ 0.42
TMEM39B-209ENST00000498613 HDGFL2Q7Z4V5 671 aaPredicted RBP17.68■□□□□ 0.42
TMEM39B-209ENST00000498613 JCADQ9P266 1359 aa17.67■□□□□ 0.42
TMEM39B-209ENST00000498613 PAK3O75914 559 aaPredicted RBP17.67■□□□□ 0.42
TMEM39B-209ENST00000498613 ACEP12821 1306 aa17.67■□□□□ 0.42
TMEM39B-209ENST00000498613 PPIP5K1Q6PFW1 1433 aa17.66■□□□□ 0.42
TMEM39B-209ENST00000498613 LMOD2Q6P5Q4 547 aa17.66■□□□□ 0.42
TMEM39B-209ENST00000498613 DDX17Q92841 729 aaKnown RBP17.66■□□□□ 0.42
TMEM39B-209ENST00000498613 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
TMEM39B-209ENST00000498613 XPCQ01831 940 aaPredicted RBP17.65■□□□□ 0.42
TMEM39B-209ENST00000498613 LRP6O75581 1613 aa17.65■□□□□ 0.42
TMEM39B-209ENST00000498613 NINLQ9Y2I6 1382 aa17.65■□□□□ 0.42
TMEM39B-209ENST00000498613 SLC12A5Q9H2X9 1139 aa17.63■□□□□ 0.41
TMEM39B-209ENST00000498613 KIF1AQ12756 1690 aa17.63■□□□□ 0.41
TMEM39B-209ENST00000498613 ATP7BP35670 1465 aa17.63■□□□□ 0.41
TMEM39B-209ENST00000498613 HAP1P54257 671 aaPredicted RBP17.62■□□□□ 0.41
TMEM39B-209ENST00000498613 BRD4O60885 1362 aaPredicted RBP17.62■□□□□ 0.41
TMEM39B-209ENST00000498613 SHPRHQ149N8 1683 aa17.61■□□□□ 0.41
TMEM39B-209ENST00000498613 ITSN1Q15811 1721 aa17.61■□□□□ 0.41
TMEM39B-209ENST00000498613 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
TMEM39B-209ENST00000498613 AHDC1Q5TGY3 1603 aaPredicted RBP17.61■□□□□ 0.41
TMEM39B-209ENST00000498613 SBNO1A3KN83 1393 aa17.6■□□□□ 0.41
TMEM39B-209ENST00000498613 POLR3AO14802 1390 aaPredicted RBP17.6■□□□□ 0.41
TMEM39B-209ENST00000498613 SPATA31A6Q5VVP1 1343 aa17.59■□□□□ 0.41
TMEM39B-209ENST00000498613 SPATA31A3Q5VYP0 1347 aa17.59■□□□□ 0.41
TMEM39B-209ENST00000498613 ABTB2Q8N961 1025 aa17.59■□□□□ 0.41
TMEM39B-209ENST00000498613 ARHGEF10O15013 1369 aa17.58■□□□□ 0.4
TMEM39B-209ENST00000498613 KTN1Q86UP2 1357 aaKnown RBP17.58■□□□□ 0.4
TMEM39B-209ENST00000498613 USP32Q8NFA0 1604 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms