RNA–Protein interactions for RNA: ENST00000498548.1

NR1H3-227, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 3

Gene NR1H3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-227ENST00000498548 KNDC1Q76NI1 1749 aa23.58■■□□□ 1.37
NR1H3-227ENST00000498548 TECPR2O15040 1411 aa23.58■■□□□ 1.36
NR1H3-227ENST00000498548 DHX57Q6P158 1386 aaKnown RBP23.56■■□□□ 1.36
NR1H3-227ENST00000498548 NUTM2BA6NNL0 878 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-227ENST00000498548 NUTM2EB1AL46 878 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-227ENST00000498548 NUTM2AQ8IVF1 878 aaPredicted RBP23.56■■□□□ 1.36
NR1H3-227ENST00000498548 SHPRHQ149N8 1683 aa23.56■■□□□ 1.36
NR1H3-227ENST00000498548 POTEAQ6S8J7 498 aa23.55■■□□□ 1.36
NR1H3-227ENST00000498548 LRP6O75581 1613 aa23.55■■□□□ 1.36
NR1H3-227ENST00000498548 SPATA31A6Q5VVP1 1343 aa23.54■■□□□ 1.36
NR1H3-227ENST00000498548 LAMC1P11047 1609 aa23.53■■□□□ 1.36
NR1H3-227ENST00000498548 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
NR1H3-227ENST00000498548 ESCO1Q5FWF5 840 aa23.53■■□□□ 1.36
NR1H3-227ENST00000498548 MEX3CQ5U5Q3 659 aaKnown RBP23.53■■□□□ 1.36
NR1H3-227ENST00000498548 LRRC59Q96AG4 307 aaKnown RBP23.53■■□□□ 1.36
NR1H3-227ENST00000498548 CDC42BPGQ6DT37 1551 aa23.51■■□□□ 1.35
NR1H3-227ENST00000498548 SIRT1Q96EB6 747 aa23.5■■□□□ 1.35
NR1H3-227ENST00000498548 PRAM1Q96QH2 718 aa23.5■■□□□ 1.35
NR1H3-227ENST00000498548 TRAK1Q9UPV9 953 aa23.49■■□□□ 1.35
NR1H3-227ENST00000498548 POGKQ9P215 609 aa23.47■■□□□ 1.35
NR1H3-227ENST00000498548 XPCQ01831 940 aaPredicted RBP23.46■■□□□ 1.35
NR1H3-227ENST00000498548 SOS2Q07890 1332 aaPredicted RBP23.46■■□□□ 1.35
NR1H3-227ENST00000498548 PNPLA6Q8IY17 1366 aa23.46■■□□□ 1.35
NR1H3-227ENST00000498548 FMN2Q9NZ56 1722 aa23.45■■□□□ 1.34
NR1H3-227ENST00000498548 ADGRB1O14514 1584 aa23.45■■□□□ 1.34
NR1H3-227ENST00000498548 FOXO3O43524 673 aa23.45■■□□□ 1.34
NR1H3-227ENST00000498548 RGPD8O14715 1765 aaPredicted RBP23.45■■□□□ 1.34
NR1H3-227ENST00000498548 STAC3Q96MF2 364 aa23.43■■□□□ 1.34
NR1H3-227ENST00000498548 DLC1Q96QB1 1528 aa23.41■■□□□ 1.34
NR1H3-227ENST00000498548 NPHP3Q7Z494 1330 aa23.4■■□□□ 1.34
NR1H3-227ENST00000498548 SIN3AQ96ST3 1273 aa23.4■■□□□ 1.34
NR1H3-227ENST00000498548 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
NR1H3-227ENST00000498548 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.34
NR1H3-227ENST00000498548 ADAMTS2O95450 1211 aa23.38■■□□□ 1.33
NR1H3-227ENST00000498548 ZNF772Q68DY9 489 aaPredicted RBP23.37■■□□□ 1.33
NR1H3-227ENST00000498548 C8orf37Q96NL8 207 aa23.37■■□□□ 1.33
NR1H3-227ENST00000498548 PXDNQ92626 1479 aa23.36■■□□□ 1.33
NR1H3-227ENST00000498548 AFF2P51816 1311 aa23.36■■□□□ 1.33
NR1H3-227ENST00000498548 NEUROD1Q13562 356 aa23.35■■□□□ 1.33
NR1H3-227ENST00000498548 PHF8Q9UPP1 1060 aa23.35■■□□□ 1.33
NR1H3-227ENST00000498548 NBPF1Q3BBV0 1214 aa23.34■■□□□ 1.33
NR1H3-227ENST00000498548 KRT28Q7Z3Y7 464 aa23.34■■□□□ 1.33
NR1H3-227ENST00000498548 PMFBP1Q8TBY8 1022 aa23.33■■□□□ 1.33
NR1H3-227ENST00000498548 KIF1AQ12756 1690 aa23.32■■□□□ 1.32
NR1H3-227ENST00000498548 ARHGEF28Q8N1W1 1705 aaKnown RBP23.31■■□□□ 1.32
NR1H3-227ENST00000498548 USP32Q8NFA0 1604 aa23.31■■□□□ 1.32
NR1H3-227ENST00000498548 L3MBTL2Q969R5 705 aa23.31■■□□□ 1.32
NR1H3-227ENST00000498548 NGLY1Q96IV0 654 aa23.31■■□□□ 1.32
NR1H3-227ENST00000498548 ADGRB2O60241 1585 aa23.29■■□□□ 1.32
NR1H3-227ENST00000498548 COL22A1Q8NFW1 1626 aaPredicted RBP23.29■■□□□ 1.32
NR1H3-227ENST00000498548 WASLO00401 505 aaPredicted RBP23.28■■□□□ 1.32
NR1H3-227ENST00000498548 PLEKHG5O94827 1062 aa23.28■■□□□ 1.32
NR1H3-227ENST00000498548 SPATA31A3Q5VYP0 1347 aa23.28■■□□□ 1.32
NR1H3-227ENST00000498548 PRR36Q9H6K5 1346 aa23.28■■□□□ 1.32
NR1H3-227ENST00000498548 KIAA1210Q9ULL0 1709 aa23.28■■□□□ 1.32
NR1H3-227ENST00000498548 RXRBP28702 533 aa23.27■■□□□ 1.32
NR1H3-227ENST00000498548 PSME1Q06323 249 aa23.26■■□□□ 1.31
NR1H3-227ENST00000498548 QTRT2Q9H974 415 aaKnown RBP23.26■■□□□ 1.31
NR1H3-227ENST00000498548 TRIM26Q12899 539 aaPredicted RBP23.25■■□□□ 1.31
NR1H3-227ENST00000498548 ANKARQ7Z5J8 1434 aa23.25■■□□□ 1.31
NR1H3-227ENST00000498548 LMOD2Q6P5Q4 547 aa23.23■■□□□ 1.31
NR1H3-227ENST00000498548 USP21Q9UK80 565 aa23.22■■□□□ 1.31
NR1H3-227ENST00000498548 CABLES1Q8TDN4 633 aa23.21■■□□□ 1.31
NR1H3-227ENST00000498548 CDK19Q9BWU1 502 aa23.21■■□□□ 1.31
NR1H3-227ENST00000498548 TULP4Q9NRJ4 1543 aa23.21■■□□□ 1.31
NR1H3-227ENST00000498548 MARF1Q9Y4F3 1742 aaKnown RBP23.19■■□□□ 1.3
NR1H3-227ENST00000498548 TNS3Q68CZ2 1445 aa23.19■■□□□ 1.3
NR1H3-227ENST00000498548 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
NR1H3-227ENST00000498548 EIF3AQ14152 1382 aaKnown RBP23.18■■□□□ 1.3
NR1H3-227ENST00000498548 FNBP4Q8N3X1 1017 aaPredicted RBP23.18■■□□□ 1.3
NR1H3-227ENST00000498548 SBNO1A3KN83 1393 aa23.17■■□□□ 1.3
NR1H3-227ENST00000498548 RBM6P78332 1123 aaKnown RBP23.17■■□□□ 1.3
NR1H3-227ENST00000498548 NGDNQ8NEJ9 315 aaKnown RBP23.17■■□□□ 1.3
NR1H3-227ENST00000498548 HAP1P54257 671 aaPredicted RBP23.16■■□□□ 1.3
NR1H3-227ENST00000498548 TRPC5Q9UL62 973 aaPredicted RBP23.14■■□□□ 1.29
NR1H3-227ENST00000498548 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
NR1H3-227ENST00000498548 GPRASP1Q5JY77 1395 aa23.14■■□□□ 1.29
NR1H3-227ENST00000498548 TRPM3Q9HCF6 1732 aaPredicted RBP23.13■■□□□ 1.29
NR1H3-227ENST00000498548 CENPJQ9HC77 1338 aaPredicted RBP23.13■■□□□ 1.29
NR1H3-227ENST00000498548 ATP7BP35670 1465 aa23.13■■□□□ 1.29
NR1H3-227ENST00000498548 NBPF8Q3BBV2 869 aa23.13■■□□□ 1.29
NR1H3-227ENST00000498548 PAK3O75914 559 aaPredicted RBP23.12■■□□□ 1.29
NR1H3-227ENST00000498548 ITSN1Q15811 1721 aa23.11■■□□□ 1.29
NR1H3-227ENST00000498548 BCL9LQ86UU0 1499 aa23.11■■□□□ 1.29
NR1H3-227ENST00000498548 RGS12O14924 1447 aa23.1■■□□□ 1.29
NR1H3-227ENST00000498548 CABP2Q9NPB3 220 aa23.1■■□□□ 1.29
NR1H3-227ENST00000498548 ARHGEF10O15013 1369 aa23.1■■□□□ 1.29
NR1H3-227ENST00000498548 CDK12Q9NYV4 1490 aaPredicted RBP23.1■■□□□ 1.29
NR1H3-227ENST00000498548 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
NR1H3-227ENST00000498548 ATRNO75882 1429 aa23.09■■□□□ 1.29
NR1H3-227ENST00000498548 SRPK2P78362 688 aaKnown RBP23.09■■□□□ 1.29
NR1H3-227ENST00000498548 ABCA3Q99758 1704 aa23.08■■□□□ 1.29
NR1H3-227ENST00000498548 CCDC61Q9Y6R9 512 aa23.08■■□□□ 1.29
NR1H3-227ENST00000498548 ROCK2O75116 1388 aaKnown RBP23.08■■□□□ 1.29
NR1H3-227ENST00000498548 ALS2Q96Q42 1657 aa23.08■■□□□ 1.29
NR1H3-227ENST00000498548 ACEP12821 1306 aa23.07■■□□□ 1.28
NR1H3-227ENST00000498548 UPF1Q92900 1129 aaKnown RBP eCLIP23.06■■□□□ 1.28
NR1H3-227ENST00000498548 TOPAZ1Q8N9V7 1692 aa23.06■■□□□ 1.28
NR1H3-227ENST00000498548 UNC5CLQ8IV45 518 aa23.05■■□□□ 1.28
NR1H3-227ENST00000498548 SLIT2O94813 1529 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms