RNA–Protein interactions for RNA: ENST00000498535.1

MKRN1-216, Transcript of makorin ring finger protein 1, humanhuman

TSL 2

Gene MKRN1, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKRN1-216ENST00000498535 ADAMTS2O95450 1211 aa37.7■■■■□ 3.63
MKRN1-216ENST00000498535 NGLY1Q96IV0 654 aa37.7■■■■□ 3.63
MKRN1-216ENST00000498535 QTRT2Q9H974 415 aaKnown RBP37.7■■■■□ 3.63
MKRN1-216ENST00000498535 ESCO1Q5FWF5 840 aa37.69■■■■□ 3.62
MKRN1-216ENST00000498535 UPF1Q92900 1129 aaKnown RBP eCLIP37.69■■■■□ 3.62
MKRN1-216ENST00000498535 CDC42BPGQ6DT37 1551 aa37.66■■■■□ 3.62
MKRN1-216ENST00000498535 RBM6P78332 1123 aaKnown RBP37.65■■■■□ 3.62
MKRN1-216ENST00000498535 LRPPRCP42704 1394 aaKnown RBP37.65■■■■□ 3.62
MKRN1-216ENST00000498535 NPHP3Q7Z494 1330 aa37.64■■■■□ 3.62
MKRN1-216ENST00000498535 WAPLQ7Z5K2 1190 aa37.64■■■■□ 3.62
MKRN1-216ENST00000498535 IFT172Q9UG01 1749 aa37.63■■■■□ 3.61
MKRN1-216ENST00000498535 TECPR2O15040 1411 aa37.62■■■■□ 3.61
MKRN1-216ENST00000498535 TMEM132EQ6IEE7 984 aa37.62■■■■□ 3.61
MKRN1-216ENST00000498535 ABCC11Q96J66 1382 aa37.61■■■■□ 3.61
MKRN1-216ENST00000498535 PIK3C2GO75747 1445 aa37.59■■■■□ 3.61
MKRN1-216ENST00000498535 NUTM2FA1L443 756 aa37.56■■■■□ 3.6
MKRN1-216ENST00000498535 FOXO3O43524 673 aa37.56■■■■□ 3.6
MKRN1-216ENST00000498535 USP21Q9UK80 565 aa37.55■■■■□ 3.6
MKRN1-216ENST00000498535 KNDC1Q76NI1 1749 aa37.53■■■■□ 3.6
MKRN1-216ENST00000498535 YTHDC2Q9H6S0 1430 aaKnown RBP37.53■■■■□ 3.6
MKRN1-216ENST00000498535 PLEKHH1Q9ULM0 1364 aa37.52■■■■□ 3.6
MKRN1-216ENST00000498535 RGS12O14924 1447 aa37.52■■■■□ 3.6
MKRN1-216ENST00000498535 COL22A1Q8NFW1 1626 aaPredicted RBP37.51■■■■□ 3.6
MKRN1-216ENST00000498535 XPCQ01831 940 aaPredicted RBP37.51■■■■□ 3.6
MKRN1-216ENST00000498535 PXDNQ92626 1479 aa37.5■■■■□ 3.59
MKRN1-216ENST00000498535 C14orf93Q9H972 538 aaKnown RBP37.49■■■■□ 3.59
MKRN1-216ENST00000498535 TRPC5Q9UL62 973 aaPredicted RBP37.49■■■■□ 3.59
MKRN1-216ENST00000498535 FNBP4Q8N3X1 1017 aaPredicted RBP37.48■■■■□ 3.59
MKRN1-216ENST00000498535 SIRT1Q96EB6 747 aa37.47■■■■□ 3.59
MKRN1-216ENST00000498535 MYOM2P54296 1465 aa37.45■■■■□ 3.59
MKRN1-216ENST00000498535 DHX57Q6P158 1386 aaKnown RBP37.44■■■■□ 3.58
MKRN1-216ENST00000498535 CFAP70Q5T0N1 1121 aa37.43■■■■□ 3.58
MKRN1-216ENST00000498535 FMN2Q9NZ56 1722 aa37.41■■■■□ 3.58
MKRN1-216ENST00000498535 RAB3GAP2Q9H2M9 1393 aa37.41■■■■□ 3.58
MKRN1-216ENST00000498535 NRXN1Q9ULB1 1477 aa37.4■■■■□ 3.58
MKRN1-216ENST00000498535 ATRNO75882 1429 aa37.36■■■■□ 3.57
MKRN1-216ENST00000498535 KIF1AQ12756 1690 aa37.36■■■■□ 3.57
MKRN1-216ENST00000498535 KRT28Q7Z3Y7 464 aa37.35■■■■□ 3.57
MKRN1-216ENST00000498535 SPATA31A3Q5VYP0 1347 aa37.34■■■■□ 3.57
MKRN1-216ENST00000498535 ATAD2Q6PL18 1390 aa37.33■■■■□ 3.57
MKRN1-216ENST00000498535 PRAM1Q96QH2 718 aa37.33■■■■□ 3.57
MKRN1-216ENST00000498535 SAFB2Q14151 953 aaKnown RBP eCLIP37.32■■■■□ 3.56
MKRN1-216ENST00000498535 PHF8Q9UPP1 1060 aa37.32■■■■□ 3.56
MKRN1-216ENST00000498535 MARF1Q9Y4F3 1742 aaKnown RBP37.32■■■■□ 3.56
MKRN1-216ENST00000498535 POGKQ9P215 609 aa37.31■■■■□ 3.56
MKRN1-216ENST00000498535 BCL9LQ86UU0 1499 aa37.3■■■■□ 3.56
MKRN1-216ENST00000498535 PSME1Q06323 249 aa37.29■■■■□ 3.56
MKRN1-216ENST00000498535 RGPD8O14715 1765 aaPredicted RBP37.24■■■■□ 3.55
MKRN1-216ENST00000498535 HAP1P54257 671 aaPredicted RBP37.24■■■■□ 3.55
MKRN1-216ENST00000498535 GJD4Q96KN9 370 aaPredicted RBP37.24■■■■□ 3.55
MKRN1-216ENST00000498535 DLC1Q96QB1 1528 aa37.22■■■■□ 3.55
MKRN1-216ENST00000498535 KDM2AQ9Y2K7 1162 aa37.21■■■■□ 3.55
MKRN1-216ENST00000498535 TNS3Q68CZ2 1445 aa37.2■■■■□ 3.55
MKRN1-216ENST00000498535 UNC5CLQ8IV45 518 aa37.2■■■■□ 3.55
MKRN1-216ENST00000498535 DCAF11Q8TEB1 546 aa37.19■■■■□ 3.54
MKRN1-216ENST00000498535 LMOD2Q6P5Q4 547 aa37.18■■■■□ 3.54
MKRN1-216ENST00000498535 TRAK1Q9UPV9 953 aa37.18■■■■□ 3.54
MKRN1-216ENST00000498535 SBNO1A3KN83 1393 aa37.17■■■■□ 3.54
MKRN1-216ENST00000498535 ANKARQ7Z5J8 1434 aa37.16■■■■□ 3.54
MKRN1-216ENST00000498535 SLIT2O94813 1529 aa37.15■■■■□ 3.54
MKRN1-216ENST00000498535 PLEKHG5O94827 1062 aa37.15■■■■□ 3.54
MKRN1-216ENST00000498535 STAC3Q96MF2 364 aa37.15■■■■□ 3.54
MKRN1-216ENST00000498535 TNKS1BP1Q9C0C2 1729 aaKnown RBP37.15■■■■□ 3.54
MKRN1-216ENST00000498535 USP32Q8NFA0 1604 aa37.14■■■■□ 3.54
MKRN1-216ENST00000498535 ADGRB1O14514 1584 aa37.14■■■■□ 3.54
MKRN1-216ENST00000498535 PMFBP1Q8TBY8 1022 aa37.14■■■■□ 3.54
MKRN1-216ENST00000498535 CABLES1Q8TDN4 633 aa37.13■■■■□ 3.53
MKRN1-216ENST00000498535 ARHGEF10O15013 1369 aa37.13■■■■□ 3.53
MKRN1-216ENST00000498535 HRCP23327 699 aa37.12■■■■□ 3.53
MKRN1-216ENST00000498535 HIRIP3Q9BW71 556 aaPredicted RBP37.12■■■■□ 3.53
MKRN1-216ENST00000498535 EP400Q96L91 3159 aa37.11■■■■□ 3.53
MKRN1-216ENST00000498535 ADGRB2O60241 1585 aa37.1■■■■□ 3.53
MKRN1-216ENST00000498535 MINK1Q8N4C8 1332 aaPredicted RBP37.1■■■■□ 3.53
MKRN1-216ENST00000498535 EIF3AQ14152 1382 aaKnown RBP37.09■■■■□ 3.53
MKRN1-216ENST00000498535 RALGAPBQ86X10 1494 aa37.08■■■■□ 3.53
MKRN1-216ENST00000498535 CCDC125Q86Z20 511 aa37.08■■■■□ 3.53
MKRN1-216ENST00000498535 GPRASP1Q5JY77 1395 aa37.04■■■■□ 3.52
MKRN1-216ENST00000498535 GLI3P10071 1580 aa37.03■■■■□ 3.52
MKRN1-216ENST00000498535 WASLO00401 505 aaPredicted RBP37.02■■■■□ 3.52
MKRN1-216ENST00000498535 VPS72Q15906 364 aa37.01■■■■□ 3.52
MKRN1-216ENST00000498535 CCDC9Q9Y3X0 531 aaKnown RBP37.01■■■■□ 3.52
MKRN1-216ENST00000498535 TULP4Q9NRJ4 1543 aa36.99■■■■□ 3.51
MKRN1-216ENST00000498535 PRR36Q9H6K5 1346 aa36.98■■■■□ 3.51
MKRN1-216ENST00000498535 NWD2Q9ULI1 1742 aa36.97■■■■□ 3.51
MKRN1-216ENST00000498535 ABCA3Q99758 1704 aa36.96■■■■□ 3.51
MKRN1-216ENST00000498535 PLCH1Q4KWH8 1693 aa36.96■■■■□ 3.51
MKRN1-216ENST00000498535 NGDNQ8NEJ9 315 aaKnown RBP36.96■■■■□ 3.51
MKRN1-216ENST00000498535 ZRANB1Q9UGI0 708 aa36.96■■■■□ 3.51
MKRN1-216ENST00000498535 FAM83GA6ND36 823 aa36.95■■■■□ 3.51
MKRN1-216ENST00000498535 SEPT12Q8IYM1 358 aa36.95■■■■□ 3.51
MKRN1-216ENST00000498535 TRPM3Q9HCF6 1732 aaPredicted RBP36.92■■■■□ 3.5
MKRN1-216ENST00000498535 SRCAPQ6ZRS2 3230 aa36.91■■■■□ 3.5
MKRN1-216ENST00000498535 PAK3O75914 559 aaPredicted RBP36.9■■■■□ 3.5
MKRN1-216ENST00000498535 BLMP54132 1417 aaPredicted RBP36.88■■■■□ 3.49
MKRN1-216ENST00000498535 ONECUT3O60422 494 aaPredicted RBP36.88■■■■□ 3.49
MKRN1-216ENST00000498535 BRWD3Q6RI45 1802 aa36.87■■■■□ 3.49
MKRN1-216ENST00000498535 ALS2Q96Q42 1657 aa36.87■■■■□ 3.49
MKRN1-216ENST00000498535 ARHGEF28Q8N1W1 1705 aaKnown RBP36.86■■■■□ 3.49
MKRN1-216ENST00000498535 BTG4Q9NY30 223 aa36.86■■■■□ 3.49
MKRN1-216ENST00000498535 A0A0G2JS52 829 aa36.85■■■■□ 3.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms