RNA–Protein interactions for RNA: ENST00000498284.1

PTPRK-215, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 524 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-215ENST00000498284 CABLES1Q8TDN4 633 aa9.39□□□□□ -0.91
PTPRK-215ENST00000498284 MTRQ99707 1265 aa9.39□□□□□ -0.91
PTPRK-215ENST00000498284 ZBTB3Q9H5J0 574 aa9.39□□□□□ -0.91
PTPRK-215ENST00000498284 GTF3C3Q9Y5Q9 886 aa9.39□□□□□ -0.91
PTPRK-215ENST00000498284 NUTM2BA6NNL0 878 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-215ENST00000498284 NUTM2EB1AL46 878 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-215ENST00000498284 C6orf229H3BNL8 230 aa9.38□□□□□ -0.91
PTPRK-215ENST00000498284 HRCP23327 699 aa9.38□□□□□ -0.91
PTPRK-215ENST00000498284 NUTM2DQ5VT03 806 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-215ENST00000498284 FBXO31Q5XUX0 539 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-215ENST00000498284 PPP2R2DQ66LE6 453 aa9.38□□□□□ -0.91
PTPRK-215ENST00000498284 NUTM2AQ8IVF1 878 aaPredicted RBP9.38□□□□□ -0.91
PTPRK-215ENST00000498284 MTMR2Q13614 643 aa9.37□□□□□ -0.91
PTPRK-215ENST00000498284 TJAP1Q5JTD0 557 aa9.37□□□□□ -0.91
PTPRK-215ENST00000498284 SYMPKQ92797 1274 aaKnown RBP9.37□□□□□ -0.91
PTPRK-215ENST00000498284 SALL2Q9Y467 1007 aaPredicted RBP9.37□□□□□ -0.91
PTPRK-215ENST00000498284 SPDYE5A6NIY4 337 aa9.36□□□□□ -0.91
PTPRK-215ENST00000498284 RTL5Q5HYW3 569 aaPredicted RBP9.36□□□□□ -0.91
PTPRK-215ENST00000498284 BRICD5Q6PL45 260 aa9.36□□□□□ -0.91
PTPRK-215ENST00000498284 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
PTPRK-215ENST00000498284 THAP11Q96EK4 314 aa9.36□□□□□ -0.91
PTPRK-215ENST00000498284 IL21Q9HBE4 155 aa9.36□□□□□ -0.91
PTPRK-215ENST00000498284 ZPR1O75312 459 aa9.35□□□□□ -0.91
PTPRK-215ENST00000498284 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
PTPRK-215ENST00000498284 RFC5P40937 340 aa9.35□□□□□ -0.91
PTPRK-215ENST00000498284 IFFO2Q5TF58 517 aa9.35□□□□□ -0.91
PTPRK-215ENST00000498284 RETREG3Q86VR2 466 aa9.34□□□□□ -0.91
PTPRK-215ENST00000498284 ZNF516Q92618 1163 aa9.34□□□□□ -0.91
PTPRK-215ENST00000498284 USB1Q9BQ65 265 aaKnown RBP9.33□□□□□ -0.92
PTPRK-215ENST00000498284 PRR7Q8TB68 274 aa9.32□□□□□ -0.92
PTPRK-215ENST00000498284 SPSB2Q99619 263 aa9.32□□□□□ -0.92
PTPRK-215ENST00000498284 CFAP99D6REC4 459 aa9.31□□□□□ -0.92
PTPRK-215ENST00000498284 TLL1O43897 1013 aa9.31□□□□□ -0.92
PTPRK-215ENST00000498284 TMEM259Q4ZIN3 620 aa9.31□□□□□ -0.92
PTPRK-215ENST00000498284 AP1G2O75843 785 aa9.29□□□□□ -0.92
PTPRK-215ENST00000498284 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-215ENST00000498284 ADH1BP00325 375 aa9.29□□□□□ -0.92
PTPRK-215ENST00000498284 KCNC4Q03721 635 aa9.29□□□□□ -0.92
PTPRK-215ENST00000498284 FAM160A2Q8N612 972 aaPredicted RBP9.29□□□□□ -0.92
PTPRK-215ENST00000498284 A0A0G2JS52 829 aa9.28□□□□□ -0.92
PTPRK-215ENST00000498284 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
PTPRK-215ENST00000498284 HELBQ8NG08 1087 aaPredicted RBP9.28□□□□□ -0.92
PTPRK-215ENST00000498284 NKX2-3Q8TAU0 364 aa9.28□□□□□ -0.92
PTPRK-215ENST00000498284 TSC1Q92574 1164 aa9.28□□□□□ -0.92
PTPRK-215ENST00000498284 BANK1Q8NDB2 785 aa9.27□□□□□ -0.93
PTPRK-215ENST00000498284 DESI1Q6ICB0 168 aa9.26□□□□□ -0.93
PTPRK-215ENST00000498284 RGS20O76081 388 aa9.25□□□□□ -0.93
PTPRK-215ENST00000498284 CTDSPL2Q05D32 466 aa9.25□□□□□ -0.93
PTPRK-215ENST00000498284 SLC6A16Q9GZN6 736 aa9.25□□□□□ -0.93
PTPRK-215ENST00000498284 USP17L8P0C7I0 530 aa9.24□□□□□ -0.93
PTPRK-215ENST00000498284 JUNDP17535 347 aa9.24□□□□□ -0.93
PTPRK-215ENST00000498284 MMP16P51512 607 aa9.24□□□□□ -0.93
PTPRK-215ENST00000498284 FLIIQ13045 1269 aa9.24□□□□□ -0.93
PTPRK-215ENST00000498284 PRDM9Q9NQV7 894 aa9.24□□□□□ -0.93
PTPRK-215ENST00000498284 DXOO77932 396 aaKnown RBP9.23□□□□□ -0.93
PTPRK-215ENST00000498284 SNRKQ9NRH2 765 aa9.23□□□□□ -0.93
PTPRK-215ENST00000498284 PER1O15534 1290 aaPredicted RBP9.22□□□□□ -0.93
PTPRK-215ENST00000498284 MCM6Q14566 821 aa9.22□□□□□ -0.93
PTPRK-215ENST00000498284 LYPD8Q6UX82 237 aa9.22□□□□□ -0.93
PTPRK-215ENST00000498284 S1PR4O95977 384 aa9.21□□□□□ -0.94
PTPRK-215ENST00000498284 PTPRNQ16849 979 aa9.2□□□□□ -0.94
PTPRK-215ENST00000498284 LRRN4Q8WUT4 740 aa9.2□□□□□ -0.94
PTPRK-215ENST00000498284 MTMR14Q8NCE2 650 aa9.19□□□□□ -0.94
PTPRK-215ENST00000498284 SOCS7O14512 581 aa9.17□□□□□ -0.94
PTPRK-215ENST00000498284 GGCXP38435 758 aa9.17□□□□□ -0.94
PTPRK-215ENST00000498284 NUDT12Q9BQG2 462 aa9.17□□□□□ -0.94
PTPRK-215ENST00000498284 HMX1Q9NP08 348 aaPredicted RBP9.17□□□□□ -0.94
PTPRK-215ENST00000498284 CCNYL3P0C7X3 344 aa9.16□□□□□ -0.94
PTPRK-215ENST00000498284 RNF223E7ERA6 249 aa9.15□□□□□ -0.94
PTPRK-215ENST00000498284 APBB1O00213 710 aa9.15□□□□□ -0.94
PTPRK-215ENST00000498284 PPEF1O14829 653 aaPredicted RBP9.15□□□□□ -0.94
PTPRK-215ENST00000498284 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
PTPRK-215ENST00000498284 C14orf37Q86TY3 774 aa9.15□□□□□ -0.94
PTPRK-215ENST00000498284 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.15□□□□□ -0.94
PTPRK-215ENST00000498284 EVA1BQ9NVM1 165 aa9.15□□□□□ -0.94
PTPRK-215ENST00000498284 FCF1Q9Y324 198 aaKnown RBP9.15□□□□□ -0.94
PTPRK-215ENST00000498284 F12P00748 615 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-215ENST00000498284 UBTFP17480 764 aaKnown RBP9.14□□□□□ -0.95
PTPRK-215ENST00000498284 CTHP32929 405 aa9.14□□□□□ -0.95
PTPRK-215ENST00000498284 ERICH6Q7L0X2 663 aa9.14□□□□□ -0.95
PTPRK-215ENST00000498284 CCDC24Q8N4L8 307 aa9.14□□□□□ -0.95
PTPRK-215ENST00000498284 GJD4Q96KN9 370 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-215ENST00000498284 TRIM34Q9BYJ4 488 aa9.14□□□□□ -0.95
PTPRK-215ENST00000498284 IRX2Q9BZI1 471 aaPredicted RBP9.14□□□□□ -0.95
PTPRK-215ENST00000498284 KCNH2Q12809 1159 aa9.13□□□□□ -0.95
PTPRK-215ENST00000498284 NR6A1Q15406 480 aa9.13□□□□□ -0.95
PTPRK-215ENST00000498284 EPS8L1Q8TE68 723 aa9.13□□□□□ -0.95
PTPRK-215ENST00000498284 MAP10Q9P2G4 905 aa9.13□□□□□ -0.95
PTPRK-215ENST00000498284 ANKLE1Q8NAG6 615 aa9.12□□□□□ -0.95
PTPRK-215ENST00000498284 PRM3Q9NNZ6 103 aa9.11□□□□□ -0.95
PTPRK-215ENST00000498284 TIMELESSQ9UNS1 1208 aa9.11□□□□□ -0.95
PTPRK-215ENST00000498284 RAD21O60216 631 aa9.1□□□□□ -0.95
PTPRK-215ENST00000498284 PTCRAQ6ISU1 281 aaPredicted RBP9.1□□□□□ -0.95
PTPRK-215ENST00000498284 POM121Q96HA1 1249 aa9.1□□□□□ -0.95
PTPRK-215ENST00000498284 COG6Q9Y2V7 657 aa9.1□□□□□ -0.95
PTPRK-215ENST00000498284 NDUFB9Q9Y6M9 179 aa9.1□□□□□ -0.95
PTPRK-215ENST00000498284 CLUAP1Q96AJ1 413 aa9.09□□□□□ -0.95
PTPRK-215ENST00000498284 GDPD2Q9HCC8 539 aa9.09□□□□□ -0.95
PTPRK-215ENST00000498284 TBC1D2BQ9UPU7 963 aa9.09□□□□□ -0.95
PTPRK-215ENST00000498284 PLA2G2CQ5R387 149 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms