RNA–Protein interactions for RNA: ENST00000497754.1

TMEM164-208, Transcript of transmembrane protein 164, human

TSL 2

Gene TMEM164, Length 236 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM164-208	ENST00000497754	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.38	■■■□□ 2.77
TMEM164-208	ENST00000497754	NUTM2E	B1AL46	878 aa	Predicted RBP	32.38	■■■□□ 2.77
TMEM164-208	ENST00000497754	TMEM132E	Q6IEE7	984 aa		32.38	■■■□□ 2.77
TMEM164-208	ENST00000497754	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.38	■■■□□ 2.77
TMEM164-208	ENST00000497754	STK26	Q9P289	416 aa		32.38	■■■□□ 2.77
TMEM164-208	ENST00000497754	ZNF772	Q68DY9	489 aa	Predicted RBP	32.37	■■■□□ 2.77
TMEM164-208	ENST00000497754	YTHDC2	Q9H6S0	1430 aa	Known RBP	32.36	■■■□□ 2.77
TMEM164-208	ENST00000497754	SOS2	Q07890	1332 aa	Predicted RBP	32.36	■■■□□ 2.77
TMEM164-208	ENST00000497754	WAPL	Q7Z5K2	1190 aa		32.34	■■■□□ 2.77
TMEM164-208	ENST00000497754	PLEKHH1	Q9ULM0	1364 aa		32.33	■■■□□ 2.77
TMEM164-208	ENST00000497754	C14orf93	Q9H972	538 aa	Known RBP	32.33	■■■□□ 2.77
TMEM164-208	ENST00000497754	FMN2	Q9NZ56	1722 aa		32.31	■■■□□ 2.76
TMEM164-208	ENST00000497754	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32.28	■■■□□ 2.76
TMEM164-208	ENST00000497754	HRC	P23327	699 aa		32.27	■■■□□ 2.76
TMEM164-208	ENST00000497754	SIRT1	Q96EB6	747 aa		32.27	■■■□□ 2.76
TMEM164-208	ENST00000497754	AFF2	P51816	1311 aa		32.26	■■■□□ 2.76
TMEM164-208	ENST00000497754	ESCO1	Q5FWF5	840 aa		32.26	■■■□□ 2.75
TMEM164-208	ENST00000497754	CFAP70	Q5T0N1	1121 aa		32.26	■■■□□ 2.75
TMEM164-208	ENST00000497754	PXDN	Q92626	1479 aa		32.25	■■■□□ 2.75
TMEM164-208	ENST00000497754	NPHP3	Q7Z494	1330 aa		32.24	■■■□□ 2.75
TMEM164-208	ENST00000497754	DHX57	Q6P158	1386 aa	Known RBP	32.23	■■■□□ 2.75
TMEM164-208	ENST00000497754	C8orf37	Q96NL8	207 aa		32.21	■■■□□ 2.75
TMEM164-208	ENST00000497754	KIF1A	Q12756	1690 aa		32.2	■■■□□ 2.74
TMEM164-208	ENST00000497754	RGPD8	O14715	1765 aa	Predicted RBP	32.19	■■■□□ 2.74
TMEM164-208	ENST00000497754	NUTM2F	A1L443	756 aa		32.19	■■■□□ 2.74
TMEM164-208	ENST00000497754	DLC1	Q96QB1	1528 aa		32.19	■■■□□ 2.74
TMEM164-208	ENST00000497754	ADGRB1	O14514	1584 aa		32.19	■■■□□ 2.74
TMEM164-208	ENST00000497754	CDK12	Q9NYV4	1490 aa	Predicted RBP	32.18	■■■□□ 2.74
TMEM164-208	ENST00000497754	RXRB	P28702	533 aa		32.18	■■■□□ 2.74
TMEM164-208	ENST00000497754	FOXO3	O43524	673 aa		32.17	■■■□□ 2.74
TMEM164-208	ENST00000497754	ADAMTS2	O95450	1211 aa		32.15	■■■□□ 2.74
TMEM164-208	ENST00000497754	MARF1	Q9Y4F3	1742 aa	Known RBP	32.14	■■■□□ 2.74
TMEM164-208	ENST00000497754	XPC	Q01831	940 aa	Predicted RBP	32.12	■■■□□ 2.73
TMEM164-208	ENST00000497754	NGLY1	Q96IV0	654 aa		32.11	■■■□□ 2.73
TMEM164-208	ENST00000497754	PRAM1	Q96QH2	718 aa		32.11	■■■□□ 2.73
TMEM164-208	ENST00000497754	ADGRB2	O60241	1585 aa		32.1	■■■□□ 2.73
TMEM164-208	ENST00000497754	DCAF11	Q8TEB1	546 aa		32.09	■■■□□ 2.73
TMEM164-208	ENST00000497754	QTRT2	Q9H974	415 aa	Known RBP	32.09	■■■□□ 2.73
TMEM164-208	ENST00000497754	STAC3	Q96MF2	364 aa		32.07	■■■□□ 2.72
TMEM164-208	ENST00000497754	KDM2A	Q9Y2K7	1162 aa		32.07	■■■□□ 2.72
TMEM164-208	ENST00000497754	USP32	Q8NFA0	1604 aa		32.07	■■■□□ 2.72
TMEM164-208	ENST00000497754	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.06	■■■□□ 2.72
TMEM164-208	ENST00000497754	RBM6	P78332	1123 aa	Known RBP	32.05	■■■□□ 2.72
TMEM164-208	ENST00000497754	RGS12	O14924	1447 aa		32.04	■■■□□ 2.72
TMEM164-208	ENST00000497754	FNBP4	Q8N3X1	1017 aa	Predicted RBP	32.04	■■■□□ 2.72
TMEM164-208	ENST00000497754	POGK	Q9P215	609 aa		32.03	■■■□□ 2.72
TMEM164-208	ENST00000497754	SPATA31A3	Q5VYP0	1347 aa		32.02	■■■□□ 2.72
TMEM164-208	ENST00000497754	UPF1	Q92900	1129 aa	Known RBP eCLIP	32.01	■■■□□ 2.71
TMEM164-208	ENST00000497754	USP21	Q9UK80	565 aa		32.01	■■■□□ 2.71
TMEM164-208	ENST00000497754	PHF8	Q9UPP1	1060 aa		32.01	■■■□□ 2.71
TMEM164-208	ENST00000497754	TRAK1	Q9UPV9	953 aa		32.01	■■■□□ 2.71
TMEM164-208	ENST00000497754	ANKAR	Q7Z5J8	1434 aa		32	■■■□□ 2.71
TMEM164-208	ENST00000497754	KRT28	Q7Z3Y7	464 aa		31.99	■■■□□ 2.71
TMEM164-208	ENST00000497754	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.99	■■■□□ 2.71
TMEM164-208	ENST00000497754	ATRN	O75882	1429 aa		31.97	■■■□□ 2.71
TMEM164-208	ENST00000497754	TRPC5	Q9UL62	973 aa	Predicted RBP	31.96	■■■□□ 2.71
TMEM164-208	ENST00000497754	TNS3	Q68CZ2	1445 aa		31.95	■■■□□ 2.71
TMEM164-208	ENST00000497754	BCL9L	Q86UU0	1499 aa		31.95	■■■□□ 2.7
TMEM164-208	ENST00000497754	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	31.95	■■■□□ 2.7
TMEM164-208	ENST00000497754	KIAA1210	Q9ULL0	1709 aa		31.93	■■■□□ 2.7
TMEM164-208	ENST00000497754	TULP4	Q9NRJ4	1543 aa		31.92	■■■□□ 2.7
TMEM164-208	ENST00000497754	PSME1	Q06323	249 aa		31.92	■■■□□ 2.7
TMEM164-208	ENST00000497754	HIRIP3	Q9BW71	556 aa	Predicted RBP	31.92	■■■□□ 2.7
TMEM164-208	ENST00000497754	SBNO1	A3KN83	1393 aa		31.92	■■■□□ 2.7
TMEM164-208	ENST00000497754	ABCA3	Q99758	1704 aa		31.92	■■■□□ 2.7
TMEM164-208	ENST00000497754	MINK1	Q8N4C8	1332 aa	Predicted RBP	31.91	■■■□□ 2.7
TMEM164-208	ENST00000497754	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.9	■■■□□ 2.7
TMEM164-208	ENST00000497754	EIF3A	Q14152	1382 aa	Known RBP	31.89	■■■□□ 2.7
TMEM164-208	ENST00000497754	SLIT2	O94813	1529 aa		31.87	■■■□□ 2.69
TMEM164-208	ENST00000497754	PRR36	Q9H6K5	1346 aa		31.87	■■■□□ 2.69
TMEM164-208	ENST00000497754	PMFBP1	Q8TBY8	1022 aa		31.87	■■■□□ 2.69
TMEM164-208	ENST00000497754	WASL	O00401	505 aa	Predicted RBP	31.86	■■■□□ 2.69
TMEM164-208	ENST00000497754	ARHGEF10	O15013	1369 aa		31.84	■■■□□ 2.69
TMEM164-208	ENST00000497754	ALS2	Q96Q42	1657 aa		31.84	■■■□□ 2.69
TMEM164-208	ENST00000497754	ITSN1	Q15811	1721 aa		31.83	■■■□□ 2.69
TMEM164-208	ENST00000497754	PLCH1	Q4KWH8	1693 aa		31.81	■■■□□ 2.68
TMEM164-208	ENST00000497754	CABLES1	Q8TDN4	633 aa		31.8	■■■□□ 2.68
TMEM164-208	ENST00000497754	NWD2	Q9ULI1	1742 aa		31.8	■■■□□ 2.68
TMEM164-208	ENST00000497754	ATP7B	P35670	1465 aa		31.78	■■■□□ 2.68
TMEM164-208	ENST00000497754	GLI3	P10071	1580 aa		31.78	■■■□□ 2.68
TMEM164-208	ENST00000497754	UNC5CL	Q8IV45	518 aa		31.78	■■■□□ 2.68
TMEM164-208	ENST00000497754	GJD4	Q96KN9	370 aa	Predicted RBP	31.78	■■■□□ 2.68
TMEM164-208	ENST00000497754	LMOD2	Q6P5Q4	547 aa		31.77	■■■□□ 2.68
TMEM164-208	ENST00000497754	HAP1	P54257	671 aa	Predicted RBP	31.76	■■■□□ 2.67
TMEM164-208	ENST00000497754	GPRASP1	Q5JY77	1395 aa		31.76	■■■□□ 2.67
TMEM164-208	ENST00000497754	ATAD2	Q6PL18	1390 aa		31.76	■■■□□ 2.67
TMEM164-208	ENST00000497754	CRYBG1	Q9Y4K1	1723 aa		31.75	■■■□□ 2.67
TMEM164-208	ENST00000497754	TOPAZ1	Q8N9V7	1692 aa		31.74	■■■□□ 2.67
TMEM164-208	ENST00000497754	RALGAPB	Q86X10	1494 aa		31.74	■■■□□ 2.67
TMEM164-208	ENST00000497754	NBPF1	Q3BBV0	1214 aa		31.72	■■■□□ 2.67
TMEM164-208	ENST00000497754	PLEKHG5	O94827	1062 aa		31.71	■■■□□ 2.67
TMEM164-208	ENST00000497754	NUDT16	Q96DE0	195 aa	Known RBP	31.7	■■■□□ 2.67
TMEM164-208	ENST00000497754	NGDN	Q8NEJ9	315 aa	Known RBP	31.69	■■■□□ 2.66
TMEM164-208	ENST00000497754	NRAP	Q86VF7	1730 aa		31.68	■■■□□ 2.66
TMEM164-208	ENST00000497754	CDK19	Q9BWU1	502 aa		31.67	■■■□□ 2.66
TMEM164-208	ENST00000497754	BRWD3	Q6RI45	1802 aa		31.67	■■■□□ 2.66
TMEM164-208	ENST00000497754	VPS72	Q15906	364 aa		31.65	■■■□□ 2.66
TMEM164-208	ENST00000497754	COL14A1	Q05707	1796 aa	Known RBP	31.65	■■■□□ 2.66
TMEM164-208	ENST00000497754	EP400	Q96L91	3159 aa		31.64	■■■□□ 2.66
TMEM164-208	ENST00000497754	FAM83G	A6ND36	823 aa		31.64	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms