RNA–Protein interactions for RNA: ENST00000497542.1

NT5C3A-212, Transcript of 5'-nucleotidase, cytosolic IIIA, humanhuman

TSL 4

Gene NT5C3A, Length 578 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NT5C3A-212ENST00000497542 SLC27A5Q9Y2P5 690 aa8.44□□□□□ -1.06
NT5C3A-212ENST00000497542 SNRPBP14678 240 aaKnown RBP8.43□□□□□ -1.06
NT5C3A-212ENST00000497542 HIC1Q14526 733 aa8.43□□□□□ -1.06
NT5C3A-212ENST00000497542 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
NT5C3A-212ENST00000497542 BRICD5Q6PL45 260 aa8.42□□□□□ -1.06
NT5C3A-212ENST00000497542 KIFC2Q96AC6 838 aa8.42□□□□□ -1.06
NT5C3A-212ENST00000497542 PRKCSHP14314 528 aaPredicted RBP8.41□□□□□ -1.06
NT5C3A-212ENST00000497542 FAM181BA6NEQ2 426 aa8.4□□□□□ -1.06
NT5C3A-212ENST00000497542 GCGRP47871 477 aa8.4□□□□□ -1.06
NT5C3A-212ENST00000497542 TRIM32Q13049 653 aa8.4□□□□□ -1.06
NT5C3A-212ENST00000497542 REPIN1Q9BWE0 567 aaKnown RBP8.4□□□□□ -1.06
NT5C3A-212ENST00000497542 DDX11L8A8MPP1 907 aa8.39□□□□□ -1.07
NT5C3A-212ENST00000497542 SULF1Q8IWU6 871 aa8.39□□□□□ -1.07
NT5C3A-212ENST00000497542 MRGPRX2Q96LB1 330 aa8.39□□□□□ -1.07
NT5C3A-212ENST00000497542 J3QL48 77 aa8.37□□□□□ -1.07
NT5C3A-212ENST00000497542 GRIPAP1Q4V328 841 aa8.37□□□□□ -1.07
NT5C3A-212ENST00000497542 FECHP22830 423 aa8.36□□□□□ -1.07
NT5C3A-212ENST00000497542 MMP16P51512 607 aa8.36□□□□□ -1.07
NT5C3A-212ENST00000497542 RNF19BQ6ZMZ0 732 aa8.36□□□□□ -1.07
NT5C3A-212ENST00000497542 P3H3Q8IVL6 736 aa8.36□□□□□ -1.07
NT5C3A-212ENST00000497542 SLC16A10Q8TF71 515 aa8.36□□□□□ -1.07
NT5C3A-212ENST00000497542 Q3C1V9 767 aa8.35□□□□□ -1.07
NT5C3A-212ENST00000497542 HPS1Q92902 700 aa8.35□□□□□ -1.07
NT5C3A-212ENST00000497542 GNPATO15228 680 aa8.34□□□□□ -1.07
NT5C3A-212ENST00000497542 SEMA3EO15041 775 aa8.33□□□□□ -1.08
NT5C3A-212ENST00000497542 KDM2AQ9Y2K7 1162 aa8.33□□□□□ -1.08
NT5C3A-212ENST00000497542 NPAS3Q8IXF0 933 aa8.32□□□□□ -1.08
NT5C3A-212ENST00000497542 NXF1Q9UBU9 619 aaKnown RBP8.32□□□□□ -1.08
NT5C3A-212ENST00000497542 DXOO77932 396 aaKnown RBP8.31□□□□□ -1.08
NT5C3A-212ENST00000497542 WNT7BP56706 349 aa8.31□□□□□ -1.08
NT5C3A-212ENST00000497542 LOC100996750A0A140TA64 210 aa8.3□□□□□ -1.08
NT5C3A-212ENST00000497542 TPRNQ4KMQ1 711 aa8.3□□□□□ -1.08
NT5C3A-212ENST00000497542 ZSCAN1Q8NBB4 408 aa8.3□□□□□ -1.08
NT5C3A-212ENST00000497542 IRF7Q92985 503 aa8.3□□□□□ -1.08
NT5C3A-212ENST00000497542 KRTAP4-6Q9BYQ5 205 aa8.3□□□□□ -1.08
NT5C3A-212ENST00000497542 RC3H1Q5TC82 1133 aaKnown RBP8.29□□□□□ -1.08
NT5C3A-212ENST00000497542 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
NT5C3A-212ENST00000497542 USB1Q9BQ65 265 aaKnown RBP8.29□□□□□ -1.08
NT5C3A-212ENST00000497542 TSHZ2Q9NRE2 1034 aa8.29□□□□□ -1.08
NT5C3A-212ENST00000497542 GPR37O15354 613 aa8.28□□□□□ -1.08
NT5C3A-212ENST00000497542 GMPRP36959 345 aa8.28□□□□□ -1.08
NT5C3A-212ENST00000497542 LORP23490 312 aaPredicted RBP8.27□□□□□ -1.09
NT5C3A-212ENST00000497542 RBM26Q5T8P6 1007 aaKnown RBP8.27□□□□□ -1.09
NT5C3A-212ENST00000497542 SMYD5Q6GMV2 418 aa8.27□□□□□ -1.09
NT5C3A-212ENST00000497542 SKOR1P84550 965 aa8.26□□□□□ -1.09
NT5C3A-212ENST00000497542 PHOX2BQ99453 314 aa8.26□□□□□ -1.09
NT5C3A-212ENST00000497542 TESPA1A2RU30 521 aaPredicted RBP8.25□□□□□ -1.09
NT5C3A-212ENST00000497542 ALDH1A1P00352 501 aa8.25□□□□□ -1.09
NT5C3A-212ENST00000497542 H3BM21 787 aa8.24□□□□□ -1.09
NT5C3A-212ENST00000497542 CCDC24Q8N4L8 307 aa8.24□□□□□ -1.09
NT5C3A-212ENST00000497542 CD46P15529 392 aa8.23□□□□□ -1.09
NT5C3A-212ENST00000497542 KDM4AO75164 1064 aa8.22□□□□□ -1.09
NT5C3A-212ENST00000497542 TRIM46Q7Z4K8 759 aa8.22□□□□□ -1.09
NT5C3A-212ENST00000497542 CAPN5O15484 640 aaPredicted RBP8.21□□□□□ -1.1
NT5C3A-212ENST00000497542 BMP1P13497 986 aa8.21□□□□□ -1.1
NT5C3A-212ENST00000497542 USP46P62068 366 aa8.21□□□□□ -1.1
NT5C3A-212ENST00000497542 SIAH2O43255 324 aa8.2□□□□□ -1.1
NT5C3A-212ENST00000497542 WASF2Q9Y6W5 498 aa8.19□□□□□ -1.1
NT5C3A-212ENST00000497542 JUNDP17535 347 aa8.18□□□□□ -1.1
NT5C3A-212ENST00000497542 EHBP1Q8NDI1 1231 aa8.18□□□□□ -1.1
NT5C3A-212ENST00000497542 ERBB4Q15303 1308 aa8.18□□□□□ -1.1
NT5C3A-212ENST00000497542 VEGFBP49765 207 aa8.17□□□□□ -1.1
NT5C3A-212ENST00000497542 HOXA2O43364 376 aa8.15□□□□□ -1.1
NT5C3A-212ENST00000497542 HLA-CQ95604 372 aa8.14□□□□□ -1.11
NT5C3A-212ENST00000497542 ZFP42Q96MM3 310 aa8.14□□□□□ -1.11
NT5C3A-212ENST00000497542 NUDT12Q9BQG2 462 aa8.14□□□□□ -1.11
NT5C3A-212ENST00000497542 VSIG8P0DPA2 414 aa8.13□□□□□ -1.11
NT5C3A-212ENST00000497542 SUZ12Q15022 739 aaKnown RBP8.13□□□□□ -1.11
NT5C3A-212ENST00000497542 GPIHBP1Q8IV16 184 aa8.13□□□□□ -1.11
NT5C3A-212ENST00000497542 PTCRAQ6ISU1 281 aaPredicted RBP8.11□□□□□ -1.11
NT5C3A-212ENST00000497542 RETREG3Q86VR2 466 aa8.11□□□□□ -1.11
NT5C3A-212ENST00000497542 SH3BP2P78314 561 aa8.1□□□□□ -1.11
NT5C3A-212ENST00000497542 CCNYL3P0C7X3 344 aa8.09□□□□□ -1.11
NT5C3A-212ENST00000497542 MAP2K5Q13163 448 aa8.09□□□□□ -1.11
NT5C3A-212ENST00000497542 SCARF1Q14162 830 aa8.09□□□□□ -1.11
NT5C3A-212ENST00000497542 MRPL14Q6P1L8 145 aaKnown RBP8.09□□□□□ -1.11
NT5C3A-212ENST00000497542 MPNDQ8N594 471 aa8.09□□□□□ -1.11
NT5C3A-212ENST00000497542 PLEKHG3A1L390 1219 aa8.08□□□□□ -1.12
NT5C3A-212ENST00000497542 GUCA2AQ02747 115 aa8.08□□□□□ -1.12
NT5C3A-212ENST00000497542 KCNMA1Q12791 1236 aa8.08□□□□□ -1.12
NT5C3A-212ENST00000497542 MDM2Q00987 491 aaPredicted RBP8.07□□□□□ -1.12
NT5C3A-212ENST00000497542 SYMPKQ92797 1274 aaKnown RBP8.07□□□□□ -1.12
NT5C3A-212ENST00000497542 MS4A1P11836 297 aa8.06□□□□□ -1.12
NT5C3A-212ENST00000497542 NNTQ13423 1086 aa8.06□□□□□ -1.12
NT5C3A-212ENST00000497542 TLL2Q9Y6L7 1015 aa8.06□□□□□ -1.12
NT5C3A-212ENST00000497542 ADH1CP00326 375 aa8.05□□□□□ -1.12
NT5C3A-212ENST00000497542 VARSP26640 1264 aaKnown RBP8.05□□□□□ -1.12
NT5C3A-212ENST00000497542 PTPRNQ16849 979 aa8.05□□□□□ -1.12
NT5C3A-212ENST00000497542 PURBQ96QR8 312 aaKnown RBP8.05□□□□□ -1.12
NT5C3A-212ENST00000497542 TIMP2P16035 220 aa8.04□□□□□ -1.12
NT5C3A-212ENST00000497542 UNC93B1Q9H1C4 597 aa8.04□□□□□ -1.12
NT5C3A-212ENST00000497542 IRF6O14896 467 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 GSK3AP49840 483 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 ERICH6Q7L0X2 663 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 NUTM1Q86Y26 1132 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 KCTD17Q8N5Z5 321 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 EVA1BQ9NVM1 165 aa8.03□□□□□ -1.12
NT5C3A-212ENST00000497542 FDX1P10109 184 aa8.02□□□□□ -1.13
NT5C3A-212ENST00000497542 WDR4P57081 412 aaKnown RBP8.02□□□□□ -1.13
NT5C3A-212ENST00000497542 ZNF511Q8NB15 262 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms