RNA–Protein interactions for RNA: ENST00000497448.1

TOM1-217, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1, Length 438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-217ENST00000497448 PXDNQ92626 1479 aa16.29■□□□□ 0.2
TOM1-217ENST00000497448 CLTCL1P53675 1640 aa16.27■□□□□ 0.19
TOM1-217ENST00000497448 FAM50AQ14320 339 aaKnown RBP16.26■□□□□ 0.19
TOM1-217ENST00000497448 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
TOM1-217ENST00000497448 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
TOM1-217ENST00000497448 ROBO2Q9HCK4 1378 aa16.26■□□□□ 0.19
TOM1-217ENST00000497448 SLIT2O94813 1529 aa16.25■□□□□ 0.19
TOM1-217ENST00000497448 ZNF326Q5BKZ1 582 aaKnown RBP16.25■□□□□ 0.19
TOM1-217ENST00000497448 USP32Q8NFA0 1604 aa16.24■□□□□ 0.19
TOM1-217ENST00000497448 APLP2Q06481 763 aa16.24■□□□□ 0.19
TOM1-217ENST00000497448 NUP155O75694 1391 aa16.23■□□□□ 0.19
TOM1-217ENST00000497448 NPHP3Q7Z494 1330 aa16.22■□□□□ 0.19
TOM1-217ENST00000497448 KIF1BO60333 1816 aa16.22■□□□□ 0.19
TOM1-217ENST00000497448 PLCH1Q4KWH8 1693 aa16.21■□□□□ 0.19
TOM1-217ENST00000497448 LOC105371045A0A1W2PR82 267 aa16.21■□□□□ 0.19
TOM1-217ENST00000497448 SF3B2Q13435 895 aaKnown RBP16.2■□□□□ 0.18
TOM1-217ENST00000497448 ROCK1Q13464 1354 aa16.2■□□□□ 0.18
TOM1-217ENST00000497448 HFM1A2PYH4 1435 aa16.19■□□□□ 0.18
TOM1-217ENST00000497448 PSDA5PKW4 1024 aaPredicted RBP16.19■□□□□ 0.18
TOM1-217ENST00000497448 UNC5CLQ8IV45 518 aa16.19■□□□□ 0.18
TOM1-217ENST00000497448 HRCP23327 699 aa16.18■□□□□ 0.18
TOM1-217ENST00000497448 XPCQ01831 940 aaPredicted RBP16.18■□□□□ 0.18
TOM1-217ENST00000497448 NWD2Q9ULI1 1742 aa16.18■□□□□ 0.18
TOM1-217ENST00000497448 ABCA3Q99758 1704 aa16.17■□□□□ 0.18
TOM1-217ENST00000497448 ESCO1Q5FWF5 840 aa16.16■□□□□ 0.18
TOM1-217ENST00000497448 SEPT12Q8IYM1 358 aa16.16■□□□□ 0.18
TOM1-217ENST00000497448 RGPD1P0DJD0 1748 aa16.16■□□□□ 0.18
TOM1-217ENST00000497448 KIF1AQ12756 1690 aa16.15■□□□□ 0.18
TOM1-217ENST00000497448 FOXO3O43524 673 aa16.14■□□□□ 0.17
TOM1-217ENST00000497448 PPLO60437 1756 aa16.13■□□□□ 0.17
TOM1-217ENST00000497448 FMN2Q9NZ56 1722 aa16.13■□□□□ 0.17
TOM1-217ENST00000497448 LRPPRCP42704 1394 aaKnown RBP16.13■□□□□ 0.17
TOM1-217ENST00000497448 TNS1Q9HBL0 1735 aaKnown RBP16.12■□□□□ 0.17
TOM1-217ENST00000497448 NAIPQ13075 1403 aa16.11■□□□□ 0.17
TOM1-217ENST00000497448 NRAPQ86VF7 1730 aa16.11■□□□□ 0.17
TOM1-217ENST00000497448 BAG6P46379 1132 aa16.11■□□□□ 0.17
TOM1-217ENST00000497448 KRT27Q7Z3Y8 459 aa16.11■□□□□ 0.17
TOM1-217ENST00000497448 VPS72Q15906 364 aa16.1■□□□□ 0.17
TOM1-217ENST00000497448 SPATA31A3Q5VYP0 1347 aa16.1■□□□□ 0.17
TOM1-217ENST00000497448 CCDC144AA2RUR9 1427 aa16.1■□□□□ 0.17
TOM1-217ENST00000497448 KNDC1Q76NI1 1749 aa16.09■□□□□ 0.17
TOM1-217ENST00000497448 ONECUT3O60422 494 aaPredicted RBP16.08■□□□□ 0.16
TOM1-217ENST00000497448 NUTM2FA1L443 756 aa16.07■□□□□ 0.16
TOM1-217ENST00000497448 TNS3Q68CZ2 1445 aa16.07■□□□□ 0.16
TOM1-217ENST00000497448 IFT172Q9UG01 1749 aa16.06■□□□□ 0.16
TOM1-217ENST00000497448 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
TOM1-217ENST00000497448 R3HDM1Q15032 1099 aaKnown RBP16.06■□□□□ 0.16
TOM1-217ENST00000497448 CCDC9Q9Y3X0 531 aaKnown RBP16.06■□□□□ 0.16
TOM1-217ENST00000497448 RGPD8O14715 1765 aaPredicted RBP16.05■□□□□ 0.16
TOM1-217ENST00000497448 DISP2A7MBM2 1401 aa16.05■□□□□ 0.16
TOM1-217ENST00000497448 TECPR2O15040 1411 aa16.05■□□□□ 0.16
TOM1-217ENST00000497448 EN1Q05925 392 aaPredicted RBP16.05■□□□□ 0.16
TOM1-217ENST00000497448 ADGRB2O60241 1585 aa16.04■□□□□ 0.16
TOM1-217ENST00000497448 THSD7AQ9UPZ6 1657 aa16.03■□□□□ 0.16
TOM1-217ENST00000497448 A0A0G2JS52 829 aa16.03■□□□□ 0.16
TOM1-217ENST00000497448 YY1P25490 414 aa16.03■□□□□ 0.16
TOM1-217ENST00000497448 MYT1Q01538 1121 aa16.03■□□□□ 0.16
TOM1-217ENST00000497448 HAP1P54257 671 aaPredicted RBP16.02■□□□□ 0.16
TOM1-217ENST00000497448 CABLES1Q8TDN4 633 aa16.02■□□□□ 0.16
TOM1-217ENST00000497448 PLEKHH1Q9ULM0 1364 aa16.01■□□□□ 0.15
TOM1-217ENST00000497448 RREB1Q92766 1687 aa16.01■□□□□ 0.15
TOM1-217ENST00000497448 FAM98CQ17RN3 349 aaKnown RBP16■□□□□ 0.15
TOM1-217ENST00000497448 KRT28Q7Z3Y7 464 aa16■□□□□ 0.15
TOM1-217ENST00000497448 RPGRIP1LQ68CZ1 1315 aa15.99■□□□□ 0.15
TOM1-217ENST00000497448 ITGAEP38570 1179 aa15.99■□□□□ 0.15
TOM1-217ENST00000497448 WAPLQ7Z5K2 1190 aa15.99■□□□□ 0.15
TOM1-217ENST00000497448 COL14A1Q05707 1796 aaKnown RBP15.99■□□□□ 0.15
TOM1-217ENST00000497448 NUP188Q5SRE5 1749 aa15.99■□□□□ 0.15
TOM1-217ENST00000497448 NRXN1Q9ULB1 1477 aa15.98■□□□□ 0.15
TOM1-217ENST00000497448 PLEKHG5O94827 1062 aa15.98■□□□□ 0.15
TOM1-217ENST00000497448 FAM182BQ5T319 152 aa15.98■□□□□ 0.15
TOM1-217ENST00000497448 EZH2Q15910 746 aaKnown RBP15.97■□□□□ 0.15
TOM1-217ENST00000497448 SBNO1A3KN83 1393 aa15.97■□□□□ 0.15
TOM1-217ENST00000497448 TRPM3Q9HCF6 1732 aaPredicted RBP15.97■□□□□ 0.15
TOM1-217ENST00000497448 FAM83GA6ND36 823 aa15.96■□□□□ 0.15
TOM1-217ENST00000497448 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
TOM1-217ENST00000497448 CRYBG1Q9Y4K1 1723 aa15.96■□□□□ 0.15
TOM1-217ENST00000497448 RRBP1Q9P2E9 1410 aaKnown RBP15.95■□□□□ 0.14
TOM1-217ENST00000497448 STK26Q9P289 416 aa15.95■□□□□ 0.14
TOM1-217ENST00000497448 ALS2Q96Q42 1657 aa15.95■□□□□ 0.14
TOM1-217ENST00000497448 ABCC11Q96J66 1382 aa15.94■□□□□ 0.14
TOM1-217ENST00000497448 ADGRF5Q8IZF2 1346 aa15.94■□□□□ 0.14
TOM1-217ENST00000497448 CAMTA1Q9Y6Y1 1673 aa15.93■□□□□ 0.14
TOM1-217ENST00000497448 PHF8Q9UPP1 1060 aa15.93■□□□□ 0.14
TOM1-217ENST00000497448 PSME1Q06323 249 aa15.92■□□□□ 0.14
TOM1-217ENST00000497448 CAMKK2Q96RR4 588 aa15.92■□□□□ 0.14
TOM1-217ENST00000497448 BTG4Q9NY30 223 aa15.92■□□□□ 0.14
TOM1-217ENST00000497448 PARD3Q8TEW0 1356 aa15.91■□□□□ 0.14
TOM1-217ENST00000497448 LMOD2Q6P5Q4 547 aa15.91■□□□□ 0.14
TOM1-217ENST00000497448 YTHDC2Q9H6S0 1430 aaKnown RBP15.91■□□□□ 0.14
TOM1-217ENST00000497448 SPATA31A5Q5VU36 1347 aa15.91■□□□□ 0.14
TOM1-217ENST00000497448 SPATA31A7Q8IWB4 1347 aa15.91■□□□□ 0.14
TOM1-217ENST00000497448 PIK3C2GO75747 1445 aa15.9■□□□□ 0.14
TOM1-217ENST00000497448 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
TOM1-217ENST00000497448 NINLQ9Y2I6 1382 aa15.87■□□□□ 0.13
TOM1-217ENST00000497448 TRIM37O94972 964 aa15.87■□□□□ 0.13
TOM1-217ENST00000497448 SPATA31E1Q6ZUB1 1445 aa15.85■□□□□ 0.13
TOM1-217ENST00000497448 ANKARQ7Z5J8 1434 aa15.85■□□□□ 0.13
TOM1-217ENST00000497448 PHRF1Q9P1Y6 1649 aaKnown RBP15.84■□□□□ 0.13
TOM1-217ENST00000497448 APBA3O96018 575 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms