RNA–Protein interactions for RNA: ENST00000497440.5

SHROOM3-210, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 611 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-210ENST00000497440 PLEKHH1Q9ULM0 1364 aa15.96■□□□□ 0.15
SHROOM3-210ENST00000497440 PHLPP1O60346 1717 aa15.96■□□□□ 0.15
SHROOM3-210ENST00000497440 STK26Q9P289 416 aa15.94■□□□□ 0.14
SHROOM3-210ENST00000497440 SOS2Q07890 1332 aaPredicted RBP15.94■□□□□ 0.14
SHROOM3-210ENST00000497440 ORAI2Q96SN7 254 aa15.92■□□□□ 0.14
SHROOM3-210ENST00000497440 SPATA31A6Q5VVP1 1343 aa15.92■□□□□ 0.14
SHROOM3-210ENST00000497440 SHPRHQ149N8 1683 aa15.91■□□□□ 0.14
SHROOM3-210ENST00000497440 TRIM26Q12899 539 aaPredicted RBP15.9■□□□□ 0.14
SHROOM3-210ENST00000497440 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
SHROOM3-210ENST00000497440 KDM2AQ9Y2K7 1162 aa15.89■□□□□ 0.13
SHROOM3-210ENST00000497440 KIAA1210Q9ULL0 1709 aa15.88■□□□□ 0.13
SHROOM3-210ENST00000497440 DDX17Q92841 729 aaKnown RBP15.87■□□□□ 0.13
SHROOM3-210ENST00000497440 PRAM1Q96QH2 718 aa15.87■□□□□ 0.13
SHROOM3-210ENST00000497440 FMN2Q9NZ56 1722 aa15.87■□□□□ 0.13
SHROOM3-210ENST00000497440 LRP6O75581 1613 aa15.86■□□□□ 0.13
SHROOM3-210ENST00000497440 SOCS7O14512 581 aa15.86■□□□□ 0.13
SHROOM3-210ENST00000497440 ADGRB2O60241 1585 aa15.86■□□□□ 0.13
SHROOM3-210ENST00000497440 L3MBTL2Q969R5 705 aa15.85■□□□□ 0.13
SHROOM3-210ENST00000497440 SIN3AQ96ST3 1273 aa15.85■□□□□ 0.13
SHROOM3-210ENST00000497440 PNPLA6Q8IY17 1366 aa15.85■□□□□ 0.13
SHROOM3-210ENST00000497440 PXDNQ92626 1479 aa15.84■□□□□ 0.13
SHROOM3-210ENST00000497440 ESCO1Q5FWF5 840 aa15.83■□□□□ 0.12
SHROOM3-210ENST00000497440 TRAK1Q9UPV9 953 aa15.83■□□□□ 0.12
SHROOM3-210ENST00000497440 NPHP3Q7Z494 1330 aa15.83■□□□□ 0.12
SHROOM3-210ENST00000497440 NBPF1Q3BBV0 1214 aa15.82■□□□□ 0.12
SHROOM3-210ENST00000497440 ANKARQ7Z5J8 1434 aa15.82■□□□□ 0.12
SHROOM3-210ENST00000497440 POTEAQ6S8J7 498 aa15.81■□□□□ 0.12
SHROOM3-210ENST00000497440 USP32Q8NFA0 1604 aa15.8■□□□□ 0.12
SHROOM3-210ENST00000497440 FOXO3O43524 673 aa15.8■□□□□ 0.12
SHROOM3-210ENST00000497440 PHF23Q9BUL5 403 aaPredicted RBP15.8■□□□□ 0.12
SHROOM3-210ENST00000497440 POGKQ9P215 609 aa15.8■□□□□ 0.12
SHROOM3-210ENST00000497440 ARHGEF28Q8N1W1 1705 aaKnown RBP15.8■□□□□ 0.12
SHROOM3-210ENST00000497440 COL22A1Q8NFW1 1626 aaPredicted RBP15.79■□□□□ 0.12
SHROOM3-210ENST00000497440 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
SHROOM3-210ENST00000497440 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
SHROOM3-210ENST00000497440 RGPD8O14715 1765 aaPredicted RBP15.77■□□□□ 0.12
SHROOM3-210ENST00000497440 KIF1AQ12756 1690 aa15.77■□□□□ 0.12
SHROOM3-210ENST00000497440 PHF8Q9UPP1 1060 aa15.77■□□□□ 0.12
SHROOM3-210ENST00000497440 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
SHROOM3-210ENST00000497440 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
SHROOM3-210ENST00000497440 SAFB2Q14151 953 aaKnown RBP eCLIP15.76■□□□□ 0.11
SHROOM3-210ENST00000497440 GPRASP1Q5JY77 1395 aa15.75■□□□□ 0.11
SHROOM3-210ENST00000497440 EIF3AQ14152 1382 aaKnown RBP15.75■□□□□ 0.11
SHROOM3-210ENST00000497440 TULP4Q9NRJ4 1543 aa15.74■□□□□ 0.11
SHROOM3-210ENST00000497440 SBNO1A3KN83 1393 aa15.74■□□□□ 0.11
SHROOM3-210ENST00000497440 MINK1Q8N4C8 1332 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 NBPF8Q3BBV2 869 aa15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 ZNF772Q68DY9 489 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 KRT28Q7Z3Y7 464 aa15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 HIRIP3Q9BW71 556 aaPredicted RBP15.73■□□□□ 0.11
SHROOM3-210ENST00000497440 TRPM1Q7Z4N2 1603 aa15.72■□□□□ 0.11
SHROOM3-210ENST00000497440 ATP7BP35670 1465 aa15.71■□□□□ 0.11
SHROOM3-210ENST00000497440 NEUROD1Q13562 356 aa15.71■□□□□ 0.11
SHROOM3-210ENST00000497440 PLEKHG3A1L390 1219 aa15.7■□□□□ 0.1
SHROOM3-210ENST00000497440 XPCQ01831 940 aaPredicted RBP15.7■□□□□ 0.1
SHROOM3-210ENST00000497440 NUDT16Q96DE0 195 aaKnown RBP15.7■□□□□ 0.1
SHROOM3-210ENST00000497440 CDK19Q9BWU1 502 aa15.7■□□□□ 0.1
SHROOM3-210ENST00000497440 NUTM2BA6NNL0 878 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 NUTM2EB1AL46 878 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 PSME1Q06323 249 aa15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 NUTM2AQ8IVF1 878 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 CCDC61Q9Y6R9 512 aa15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 POLR3AO14802 1390 aaPredicted RBP15.69■□□□□ 0.1
SHROOM3-210ENST00000497440 AFF2P51816 1311 aa15.68■□□□□ 0.1
SHROOM3-210ENST00000497440 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
SHROOM3-210ENST00000497440 TRPM3Q9HCF6 1732 aaPredicted RBP15.68■□□□□ 0.1
SHROOM3-210ENST00000497440 TNS3Q68CZ2 1445 aa15.68■□□□□ 0.1
SHROOM3-210ENST00000497440 PMFBP1Q8TBY8 1022 aa15.67■□□□□ 0.1
SHROOM3-210ENST00000497440 CDK12Q9NYV4 1490 aaPredicted RBP15.66■□□□□ 0.1
SHROOM3-210ENST00000497440 MEX3CQ5U5Q3 659 aaKnown RBP15.66■□□□□ 0.1
SHROOM3-210ENST00000497440 SBNO2Q9Y2G9 1366 aa15.65■□□□□ 0.1
SHROOM3-210ENST00000497440 TOPAZ1Q8N9V7 1692 aa15.65■□□□□ 0.1
SHROOM3-210ENST00000497440 CLSPNQ9HAW4 1339 aa15.65■□□□□ 0.1
SHROOM3-210ENST00000497440 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
SHROOM3-210ENST00000497440 ARHGEF10O15013 1369 aa15.64■□□□□ 0.09
SHROOM3-210ENST00000497440 ALS2Q96Q42 1657 aa15.64■□□□□ 0.09
SHROOM3-210ENST00000497440 ADAMTS2O95450 1211 aa15.64■□□□□ 0.09
SHROOM3-210ENST00000497440 C8orf37Q96NL8 207 aa15.64■□□□□ 0.09
SHROOM3-210ENST00000497440 SLIT2O94813 1529 aa15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 NGLY1Q96IV0 654 aa15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 RALGAPBQ86X10 1494 aa15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 ITSN1Q15811 1721 aa15.63■□□□□ 0.09
SHROOM3-210ENST00000497440 RXRBP28702 533 aa15.62■□□□□ 0.09
SHROOM3-210ENST00000497440 QTRT2Q9H974 415 aaKnown RBP15.62■□□□□ 0.09
SHROOM3-210ENST00000497440 TIMELESSQ9UNS1 1208 aa15.62■□□□□ 0.09
SHROOM3-210ENST00000497440 ATRNO75882 1429 aa15.61■□□□□ 0.09
SHROOM3-210ENST00000497440 RBM6P78332 1123 aaKnown RBP15.61■□□□□ 0.09
SHROOM3-210ENST00000497440 ACEP12821 1306 aa15.61■□□□□ 0.09
SHROOM3-210ENST00000497440 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
SHROOM3-210ENST00000497440 EP400Q96L91 3159 aa15.61■□□□□ 0.09
SHROOM3-210ENST00000497440 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
SHROOM3-210ENST00000497440 USP21Q9UK80 565 aa15.6■□□□□ 0.09
SHROOM3-210ENST00000497440 QRICH2Q9H0J4 1663 aa15.6■□□□□ 0.09
SHROOM3-210ENST00000497440 BRD4O60885 1362 aaPredicted RBP15.6■□□□□ 0.09
SHROOM3-210ENST00000497440 SSH2Q76I76 1423 aa15.6■□□□□ 0.09
SHROOM3-210ENST00000497440 CRYBG1Q9Y4K1 1723 aa15.59■□□□□ 0.09
SHROOM3-210ENST00000497440 ABCA3Q99758 1704 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms