RNA–Protein interactions for RNA: ENST00000497377.5

HLA-B-254, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 917 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-254ENST00000497377 KDM2AQ9Y2K7 1162 aa16.6■□□□□ 0.25
HLA-B-254ENST00000497377 LRPPRCP42704 1394 aaKnown RBP16.6■□□□□ 0.25
HLA-B-254ENST00000497377 DCCP43146 1447 aa16.6■□□□□ 0.25
HLA-B-254ENST00000497377 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
HLA-B-254ENST00000497377 ABCC11Q96J66 1382 aa16.59■□□□□ 0.25
HLA-B-254ENST00000497377 TECPR2O15040 1411 aa16.59■□□□□ 0.25
HLA-B-254ENST00000497377 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.59■□□□□ 0.25
HLA-B-254ENST00000497377 CADPS2Q86UW7 1296 aa16.58■□□□□ 0.24
HLA-B-254ENST00000497377 ASXL1Q8IXJ9 1541 aa16.58■□□□□ 0.24
HLA-B-254ENST00000497377 YTHDC2Q9H6S0 1430 aaKnown RBP16.57■□□□□ 0.24
HLA-B-254ENST00000497377 ADGRL3Q9HAR2 1447 aa16.57■□□□□ 0.24
HLA-B-254ENST00000497377 ROBO2Q9HCK4 1378 aa16.57■□□□□ 0.24
HLA-B-254ENST00000497377 ATF3P18847 181 aa16.57■□□□□ 0.24
HLA-B-254ENST00000497377 CFAP70Q5T0N1 1121 aa16.57■□□□□ 0.24
HLA-B-254ENST00000497377 FAM135BQ49AJ0 1406 aa16.56■□□□□ 0.24
HLA-B-254ENST00000497377 PCGF6Q9BYE7 350 aa16.56■□□□□ 0.24
HLA-B-254ENST00000497377 TMEM132EQ6IEE7 984 aa16.55■□□□□ 0.24
HLA-B-254ENST00000497377 SIRT1Q96EB6 747 aa16.55■□□□□ 0.24
HLA-B-254ENST00000497377 SIN3AQ96ST3 1273 aa16.55■□□□□ 0.24
HLA-B-254ENST00000497377 SLAIN2Q9P270 581 aa16.55■□□□□ 0.24
HLA-B-254ENST00000497377 NALCNQ8IZF0 1738 aa16.54■□□□□ 0.24
HLA-B-254ENST00000497377 KIAA1210Q9ULL0 1709 aa16.54■□□□□ 0.24
HLA-B-254ENST00000497377 AKT1S1Q96B36 256 aa16.54■□□□□ 0.24
HLA-B-254ENST00000497377 STK26Q9P289 416 aa16.54■□□□□ 0.24
HLA-B-254ENST00000497377 ADGRB1O14514 1584 aa16.53■□□□□ 0.24
HLA-B-254ENST00000497377 NEUROD1Q13562 356 aa16.53■□□□□ 0.24
HLA-B-254ENST00000497377 DLC1Q96QB1 1528 aa16.52■□□□□ 0.24
HLA-B-254ENST00000497377 L3MBTL2Q969R5 705 aa16.52■□□□□ 0.24
HLA-B-254ENST00000497377 ROBO1Q9Y6N7 1651 aa16.51■□□□□ 0.23
HLA-B-254ENST00000497377 CHRDL2Q6WN34 429 aa16.51■□□□□ 0.23
HLA-B-254ENST00000497377 HSPA1LP34931 641 aa16.49■□□□□ 0.23
HLA-B-254ENST00000497377 CDC42BPGQ6DT37 1551 aa16.48■□□□□ 0.23
HLA-B-254ENST00000497377 CLSPNQ9HAW4 1339 aa16.47■□□□□ 0.23
HLA-B-254ENST00000497377 MST1RQ04912 1400 aa16.47■□□□□ 0.23
HLA-B-254ENST00000497377 WAPLQ7Z5K2 1190 aa16.47■□□□□ 0.23
HLA-B-254ENST00000497377 TONSLQ96HA7 1378 aa16.46■□□□□ 0.23
HLA-B-254ENST00000497377 PLEKHH1Q9ULM0 1364 aa16.45■□□□□ 0.22
HLA-B-254ENST00000497377 PRAM1Q96QH2 718 aa16.44■□□□□ 0.22
HLA-B-254ENST00000497377 POGKQ9P215 609 aa16.44■□□□□ 0.22
HLA-B-254ENST00000497377 TRAK1Q9UPV9 953 aa16.44■□□□□ 0.22
HLA-B-254ENST00000497377 C1orf167Q5SNV9 1468 aa16.42■□□□□ 0.22
HLA-B-254ENST00000497377 ARHGEF28Q8N1W1 1705 aaKnown RBP16.42■□□□□ 0.22
HLA-B-254ENST00000497377 AHDC1Q5TGY3 1603 aaPredicted RBP16.42■□□□□ 0.22
HLA-B-254ENST00000497377 TRPM1Q7Z4N2 1603 aa16.42■□□□□ 0.22
HLA-B-254ENST00000497377 BRINP3Q76B58 766 aa16.42■□□□□ 0.22
HLA-B-254ENST00000497377 PHLPP1O60346 1717 aa16.42■□□□□ 0.22
HLA-B-254ENST00000497377 ADGRB2O60241 1585 aa16.41■□□□□ 0.22
HLA-B-254ENST00000497377 FMN2Q9NZ56 1722 aa16.4■□□□□ 0.22
HLA-B-254ENST00000497377 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
HLA-B-254ENST00000497377 NHSL1Q5SYE7 1610 aa16.38■□□□□ 0.21
HLA-B-254ENST00000497377 SAFB2Q14151 953 aaKnown RBP eCLIP16.38■□□□□ 0.21
HLA-B-254ENST00000497377 REM2Q8IYK8 340 aaPredicted RBP16.38■□□□□ 0.21
HLA-B-254ENST00000497377 TIMELESSQ9UNS1 1208 aa16.38■□□□□ 0.21
HLA-B-254ENST00000497377 ROCK2O75116 1388 aaKnown RBP16.38■□□□□ 0.21
HLA-B-254ENST00000497377 EIF3AQ14152 1382 aaKnown RBP16.38■□□□□ 0.21
HLA-B-254ENST00000497377 COL16A1Q07092 1604 aaPredicted RBP16.37■□□□□ 0.21
HLA-B-254ENST00000497377 NBPF8Q3BBV2 869 aa16.35■□□□□ 0.21
HLA-B-254ENST00000497377 ORAI2Q96SN7 254 aa16.35■□□□□ 0.21
HLA-B-254ENST00000497377 GPRASP1Q5JY77 1395 aa16.35■□□□□ 0.21
HLA-B-254ENST00000497377 ANKARQ7Z5J8 1434 aa16.35■□□□□ 0.21
HLA-B-254ENST00000497377 ESCO1Q5FWF5 840 aa16.34■□□□□ 0.21
HLA-B-254ENST00000497377 CCER1Q8TC90 406 aaPredicted RBP16.34■□□□□ 0.21
HLA-B-254ENST00000497377 MINK1Q8N4C8 1332 aaPredicted RBP16.34■□□□□ 0.21
HLA-B-254ENST00000497377 JCADQ9P266 1359 aa16.34■□□□□ 0.21
HLA-B-254ENST00000497377 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
HLA-B-254ENST00000497377 KIF1AQ12756 1690 aa16.34■□□□□ 0.21
HLA-B-254ENST00000497377 WASLO00401 505 aaPredicted RBP16.32■□□□□ 0.2
HLA-B-254ENST00000497377 NPHP3Q7Z494 1330 aa16.32■□□□□ 0.2
HLA-B-254ENST00000497377 CENPJQ9HC77 1338 aaPredicted RBP16.32■□□□□ 0.2
HLA-B-254ENST00000497377 TULP4Q9NRJ4 1543 aa16.31■□□□□ 0.2
HLA-B-254ENST00000497377 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
HLA-B-254ENST00000497377 LRRC59Q96AG4 307 aaKnown RBP16.31■□□□□ 0.2
HLA-B-254ENST00000497377 HIRIP3Q9BW71 556 aaPredicted RBP16.31■□□□□ 0.2
HLA-B-254ENST00000497377 RGPD8O14715 1765 aaPredicted RBP16.31■□□□□ 0.2
HLA-B-254ENST00000497377 SHPRHQ149N8 1683 aa16.3■□□□□ 0.2
HLA-B-254ENST00000497377 SOS2Q07890 1332 aaPredicted RBP16.3■□□□□ 0.2
HLA-B-254ENST00000497377 QRICH2Q9H0J4 1663 aa16.3■□□□□ 0.2
HLA-B-254ENST00000497377 MED1Q15648 1581 aaPredicted RBP16.3■□□□□ 0.2
HLA-B-254ENST00000497377 CARD11Q9BXL7 1154 aa16.29■□□□□ 0.2
HLA-B-254ENST00000497377 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
HLA-B-254ENST00000497377 SPATA31A6Q5VVP1 1343 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 SPDYE2BA6NHP3 402 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 SPDYE6P0CI01 402 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 PHF8Q9UPP1 1060 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 ITSN1Q15811 1721 aa16.28■□□□□ 0.2
HLA-B-254ENST00000497377 FOXO3O43524 673 aa16.27■□□□□ 0.2
HLA-B-254ENST00000497377 DDX17Q92841 729 aaKnown RBP16.27■□□□□ 0.2
HLA-B-254ENST00000497377 CDK19Q9BWU1 502 aa16.26■□□□□ 0.19
HLA-B-254ENST00000497377 PXDNQ92626 1479 aa16.26■□□□□ 0.19
HLA-B-254ENST00000497377 DISP3Q9P2K9 1392 aa16.25■□□□□ 0.19
HLA-B-254ENST00000497377 SBNO2Q9Y2G9 1366 aa16.25■□□□□ 0.19
HLA-B-254ENST00000497377 PRR36Q9H6K5 1346 aa16.24■□□□□ 0.19
HLA-B-254ENST00000497377 ATP7BP35670 1465 aa16.24■□□□□ 0.19
HLA-B-254ENST00000497377 MKRN4PQ13434 485 aaPredicted RBP16.24■□□□□ 0.19
HLA-B-254ENST00000497377 EVC2Q86UK5 1308 aa16.23■□□□□ 0.19
HLA-B-254ENST00000497377 PSME1Q06323 249 aa16.23■□□□□ 0.19
HLA-B-254ENST00000497377 NUDT16Q96DE0 195 aaKnown RBP16.23■□□□□ 0.19
HLA-B-254ENST00000497377 PNPLA6Q8IY17 1366 aa16.23■□□□□ 0.19
HLA-B-254ENST00000497377 CCDC61Q9Y6R9 512 aa16.22■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms