RNA–Protein interactions for RNA: ENST00000497155.1

USP13-204, Transcript of ubiquitin specific peptidase 13, humanhuman

TSL 3

Gene USP13, Length 899 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP13-204ENST00000497155 FAM160A2Q8N612 972 aaPredicted RBP9.38□□□□□ -0.91
USP13-204ENST00000497155 PRDM9Q9NQV7 894 aa9.38□□□□□ -0.91
USP13-204ENST00000497155 MDM2Q00987 491 aaPredicted RBP9.37□□□□□ -0.91
USP13-204ENST00000497155 THOC2Q8NI27 1593 aaKnown RBP9.37□□□□□ -0.91
USP13-204ENST00000497155 CD46P15529 392 aa9.36□□□□□ -0.91
USP13-204ENST00000497155 RNF19BQ6ZMZ0 732 aa9.36□□□□□ -0.91
USP13-204ENST00000497155 CCDC102AQ96A19 550 aa9.36□□□□□ -0.91
USP13-204ENST00000497155 TNFRSF10AO00220 468 aa9.35□□□□□ -0.91
USP13-204ENST00000497155 ZMYND10O75800 440 aa9.35□□□□□ -0.91
USP13-204ENST00000497155 FMNL1O95466 1100 aaPredicted RBP9.35□□□□□ -0.91
USP13-204ENST00000497155 BRICD5Q6PL45 260 aa9.35□□□□□ -0.91
USP13-204ENST00000497155 MINK1Q8N4C8 1332 aaPredicted RBP9.34□□□□□ -0.91
USP13-204ENST00000497155 LAMC3Q9Y6N6 1575 aa9.34□□□□□ -0.91
USP13-204ENST00000497155 GDF9O60383 454 aa9.34□□□□□ -0.91
USP13-204ENST00000497155 FCF1Q9Y324 198 aaKnown RBP9.34□□□□□ -0.91
USP13-204ENST00000497155 HLA-CQ95604 372 aa9.33□□□□□ -0.92
USP13-204ENST00000497155 KIF21AQ7Z4S6 1674 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PRR20EP86478 221 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PRR20CP86479 221 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PRR20DP86480 221 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PRR20BP86481 221 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PRR20AP86496 221 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 BARGINQ6ZT62 677 aa9.32□□□□□ -0.92
USP13-204ENST00000497155 PDS5BQ9NTI5 1447 aa9.31□□□□□ -0.92
USP13-204ENST00000497155 SALL2Q9Y467 1007 aaPredicted RBP9.31□□□□□ -0.92
USP13-204ENST00000497155 WIZO95785 1651 aa9.31□□□□□ -0.92
USP13-204ENST00000497155 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
USP13-204ENST00000497155 PKD2L1Q9P0L9 805 aa9.3□□□□□ -0.92
USP13-204ENST00000497155 KDM4AO75164 1064 aa9.29□□□□□ -0.92
USP13-204ENST00000497155 FOXC1Q12948 553 aa9.29□□□□□ -0.92
USP13-204ENST00000497155 GRIPAP1Q4V328 841 aa9.29□□□□□ -0.92
USP13-204ENST00000497155 FAM187AA6NFU0 413 aa9.28□□□□□ -0.92
USP13-204ENST00000497155 MSS51Q4VC12 460 aa9.28□□□□□ -0.92
USP13-204ENST00000497155 PKDCCQ504Y2 493 aa9.28□□□□□ -0.92
USP13-204ENST00000497155 REPIN1Q9BWE0 567 aaKnown RBP9.28□□□□□ -0.92
USP13-204ENST00000497155 MYT1Q01538 1121 aa9.27□□□□□ -0.93
USP13-204ENST00000497155 GUCA2AQ02747 115 aa9.27□□□□□ -0.93
USP13-204ENST00000497155 SLC24A3Q9HC58 644 aa9.27□□□□□ -0.93
USP13-204ENST00000497155 GPCPD1Q9NPB8 672 aa9.27□□□□□ -0.93
USP13-204ENST00000497155 DGAT1O75907 488 aa9.26□□□□□ -0.93
USP13-204ENST00000497155 RPIAP49247 311 aa9.26□□□□□ -0.93
USP13-204ENST00000497155 ZNF787Q6DD87 383 aa9.26□□□□□ -0.93
USP13-204ENST00000497155 FAM217BQ9NTX9 383 aaPredicted RBP9.26□□□□□ -0.93
USP13-204ENST00000497155 MRC2Q9UBG0 1479 aa9.26□□□□□ -0.93
USP13-204ENST00000497155 HOXA2O43364 376 aa9.25□□□□□ -0.93
USP13-204ENST00000497155 Q3C1V9 767 aa9.25□□□□□ -0.93
USP13-204ENST00000497155 KRI1Q8N9T8 703 aaKnown RBP9.25□□□□□ -0.93
USP13-204ENST00000497155 CLCN1P35523 988 aa9.24□□□□□ -0.93
USP13-204ENST00000497155 MMP16P51512 607 aa9.23□□□□□ -0.93
USP13-204ENST00000497155 SYMPKQ92797 1274 aaKnown RBP9.23□□□□□ -0.93
USP13-204ENST00000497155 USB1Q9BQ65 265 aaKnown RBP9.23□□□□□ -0.93
USP13-204ENST00000497155 RSF1Q96T23 1441 aaPredicted RBP9.22□□□□□ -0.93
USP13-204ENST00000497155 WDR62O43379 1518 aa9.22□□□□□ -0.93
USP13-204ENST00000497155 USP46P62068 366 aa9.22□□□□□ -0.93
USP13-204ENST00000497155 CEP164Q9UPV0 1460 aa9.21□□□□□ -0.93
USP13-204ENST00000497155 POTECB2RU33 542 aa9.21□□□□□ -0.94
USP13-204ENST00000497155 ST8SIA5O15466 376 aa9.21□□□□□ -0.94
USP13-204ENST00000497155 CD2BP2O95400 341 aaKnown RBP9.21□□□□□ -0.94
USP13-204ENST00000497155 FANCD2Q9BXW9 1451 aa9.21□□□□□ -0.94
USP13-204ENST00000497155 ZBTB24O43167 697 aaPredicted RBP9.2□□□□□ -0.94
USP13-204ENST00000497155 DXOO77932 396 aaKnown RBP9.2□□□□□ -0.94
USP13-204ENST00000497155 AK7Q96M32 723 aa9.2□□□□□ -0.94
USP13-204ENST00000497155 TOR4AQ9NXH8 423 aa9.19□□□□□ -0.94
USP13-204ENST00000497155 CFTRP13569 1480 aa9.18□□□□□ -0.94
USP13-204ENST00000497155 SSTR3P32745 418 aaPredicted RBP9.18□□□□□ -0.94
USP13-204ENST00000497155 NUTM1Q86Y26 1132 aa9.18□□□□□ -0.94
USP13-204ENST00000497155 TOP2AP11388 1531 aaKnown RBP9.17□□□□□ -0.94
USP13-204ENST00000497155 TRIM32Q13049 653 aa9.17□□□□□ -0.94
USP13-204ENST00000497155 CYP4X1Q8N118 509 aa9.17□□□□□ -0.94
USP13-204ENST00000497155 CCDC24Q8N4L8 307 aa9.17□□□□□ -0.94
USP13-204ENST00000497155 AAASQ9NRG9 546 aa9.17□□□□□ -0.94
USP13-204ENST00000497155 TRIM66O15016 1216 aa9.16□□□□□ -0.94
USP13-204ENST00000497155 PCDHGC3Q9UN70 934 aa9.16□□□□□ -0.94
USP13-204ENST00000497155 TTLL12Q14166 644 aaPredicted RBP9.15□□□□□ -0.94
USP13-204ENST00000497155 ZNF775Q96BV0 537 aaPredicted RBP9.15□□□□□ -0.94
USP13-204ENST00000497155 DACH1Q9UI36 760 aa9.15□□□□□ -0.94
USP13-204ENST00000497155 URB2Q14146 1524 aaKnown RBP9.15□□□□□ -0.95
USP13-204ENST00000497155 JUNDP17535 347 aa9.14□□□□□ -0.95
USP13-204ENST00000497155 NDUFV2P19404 249 aa9.14□□□□□ -0.95
USP13-204ENST00000497155 AMHR2Q16671 573 aa9.14□□□□□ -0.95
USP13-204ENST00000497155 GIGYF2Q6Y7W6 1299 aaKnown RBP9.14□□□□□ -0.95
USP13-204ENST00000497155 SPIRE2Q8WWL2 714 aa9.14□□□□□ -0.95
USP13-204ENST00000497155 WNT7AO00755 349 aa9.13□□□□□ -0.95
USP13-204ENST00000497155 FDX1P10109 184 aa9.13□□□□□ -0.95
USP13-204ENST00000497155 TTC24A2A3L6 582 aaPredicted RBP9.12□□□□□ -0.95
USP13-204ENST00000497155 MOXD2PA6NHM9 499 aa9.12□□□□□ -0.95
USP13-204ENST00000497155 SKOR1P84550 965 aa9.12□□□□□ -0.95
USP13-204ENST00000497155 MRGPRX2Q96LB1 330 aa9.12□□□□□ -0.95
USP13-204ENST00000497155 C6orf229H3BNL8 230 aa9.11□□□□□ -0.95
USP13-204ENST00000497155 AVPP01185 164 aa9.11□□□□□ -0.95
USP13-204ENST00000497155 BRPF1P55201 1214 aaPredicted RBP9.11□□□□□ -0.95
USP13-204ENST00000497155 PDE4DQ08499 809 aa9.11□□□□□ -0.95
USP13-204ENST00000497155 PTCRAQ6ISU1 281 aaPredicted RBP9.11□□□□□ -0.95
USP13-204ENST00000497155 RETREG3Q86VR2 466 aa9.11□□□□□ -0.95
USP13-204ENST00000497155 SMPD1P17405 629 aa9.1□□□□□ -0.95
USP13-204ENST00000497155 CCDC88BA6NC98 1476 aa9.09□□□□□ -0.95
USP13-204ENST00000497155 J3QL48 77 aa9.09□□□□□ -0.95
USP13-204ENST00000497155 PARP9Q8IXQ6 854 aa9.09□□□□□ -0.95
USP13-204ENST00000497155 CRIPAKQ8N1N5 446 aa9.09□□□□□ -0.95
USP13-204ENST00000497155 SNIP1Q8TAD8 396 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms