RNA–Protein interactions for RNA: ENST00000497073.1

TMC1-206, Transcript of transmembrane channel like 1, humanhuman

TSL 5

Gene TMC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-206ENST00000497073 SLC52A1Q9NWF4 448 aa11.21□□□□□ -0.61
TMC1-206ENST00000497073 UGGT1Q9NYU2 1555 aa11.2□□□□□ -0.62
TMC1-206ENST00000497073 ERVK-7P63135 1459 aa11.2□□□□□ -0.62
TMC1-206ENST00000497073 PYGBP11216 843 aa11.2□□□□□ -0.62
TMC1-206ENST00000497073 HDGFP51858 240 aaKnown RBP11.2□□□□□ -0.62
TMC1-206ENST00000497073 SPATA31D1Q6ZQQ2 1576 aa11.2□□□□□ -0.62
TMC1-206ENST00000497073 ZNF142P52746 1687 aaPredicted RBP11.19□□□□□ -0.62
TMC1-206ENST00000497073 LMTK2Q8IWU2 1503 aa11.19□□□□□ -0.62
TMC1-206ENST00000497073 STRCQ7RTU9 1775 aa11.18□□□□□ -0.62
TMC1-206ENST00000497073 MROH1Q8NDA8 1641 aa11.18□□□□□ -0.62
TMC1-206ENST00000497073 TXNDC2Q86VQ3 553 aa11.18□□□□□ -0.62
TMC1-206ENST00000497073 ZBTB47Q9UFB7 747 aaPredicted RBP11.18□□□□□ -0.62
TMC1-206ENST00000497073 RRBP1Q9P2E9 1410 aaKnown RBP11.18□□□□□ -0.62
TMC1-206ENST00000497073 GOLGA2Q08379 1002 aa11.17□□□□□ -0.62
TMC1-206ENST00000497073 IDI1Q13907 227 aa11.17□□□□□ -0.62
TMC1-206ENST00000497073 ANKRD13DQ6ZTN6 518 aa11.17□□□□□ -0.62
TMC1-206ENST00000497073 RPRD2Q5VT52 1461 aaKnown RBP11.17□□□□□ -0.62
TMC1-206ENST00000497073 DEPDC5O75140 1603 aa11.17□□□□□ -0.62
TMC1-206ENST00000497073 NUP155O75694 1391 aa11.16□□□□□ -0.62
TMC1-206ENST00000497073 DPY19L2Q6NUT2 758 aa11.16□□□□□ -0.62
TMC1-206ENST00000497073 ZNF335Q9H4Z2 1342 aaPredicted RBP11.15□□□□□ -0.62
TMC1-206ENST00000497073 NPHP4O75161 1426 aaPredicted RBP11.15□□□□□ -0.62
TMC1-206ENST00000497073 ACIN1Q9UKV3 1341 aaKnown RBP11.14□□□□□ -0.63
TMC1-206ENST00000497073 VWDEQ8N2E2 1590 aa11.14□□□□□ -0.63
TMC1-206ENST00000497073 CEP152O94986 1710 aa11.13□□□□□ -0.63
TMC1-206ENST00000497073 NOS1P29475 1434 aa11.13□□□□□ -0.63
TMC1-206ENST00000497073 BCANQ96GW7 911 aa11.13□□□□□ -0.63
TMC1-206ENST00000497073 TMEM2Q9UHN6 1383 aa11.13□□□□□ -0.63
TMC1-206ENST00000497073 MED14O60244 1454 aa11.12□□□□□ -0.63
TMC1-206ENST00000497073 IQSEC2Q5JU85 1478 aa11.12□□□□□ -0.63
TMC1-206ENST00000497073 CHGAP10645 457 aaKnown RBP11.12□□□□□ -0.63
TMC1-206ENST00000497073 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.12□□□□□ -0.63
TMC1-206ENST00000497073 TRIM52Q96A61 297 aa11.12□□□□□ -0.63
TMC1-206ENST00000497073 EFCAB6Q5THR3 1501 aa11.12□□□□□ -0.63
TMC1-206ENST00000497073 RIMBP2O15034 1052 aa11.11□□□□□ -0.63
TMC1-206ENST00000497073 PPP1R15AO75807 674 aaPredicted RBP11.11□□□□□ -0.63
TMC1-206ENST00000497073 SCAF11Q99590 1463 aaKnown RBP11.11□□□□□ -0.63
TMC1-206ENST00000497073 UBAP1LF5GYI3 381 aa11.1□□□□□ -0.63
TMC1-206ENST00000497073 TOM1O60784 492 aa11.1□□□□□ -0.63
TMC1-206ENST00000497073 LTKP29376 864 aa11.1□□□□□ -0.63
TMC1-206ENST00000497073 LTBP4Q8N2S1 1624 aa11.09□□□□□ -0.63
TMC1-206ENST00000497073 BOLA1Q9Y3E2 137 aa11.09□□□□□ -0.63
TMC1-206ENST00000497073 SLIT1O75093 1534 aa11.09□□□□□ -0.63
TMC1-206ENST00000497073 CPS1P31327 1500 aa11.09□□□□□ -0.63
TMC1-206ENST00000497073 UNC13BO14795 1591 aa11.08□□□□□ -0.64
TMC1-206ENST00000497073 ARHGAP23Q9P227 1491 aa11.08□□□□□ -0.64
TMC1-206ENST00000497073 HFM1A2PYH4 1435 aa11.08□□□□□ -0.64
TMC1-206ENST00000497073 NAIPQ13075 1403 aa11.08□□□□□ -0.64
TMC1-206ENST00000497073 TET3O43151 1660 aa11.08□□□□□ -0.64
TMC1-206ENST00000497073 TRIM26Q12899 539 aaPredicted RBP11.06□□□□□ -0.64
TMC1-206ENST00000497073 DCAF8Q5TAQ9 597 aa11.06□□□□□ -0.64
TMC1-206ENST00000497073 NEURL4Q96JN8 1562 aa11.06□□□□□ -0.64
TMC1-206ENST00000497073 POLR1AO95602 1720 aaPredicted RBP11.06□□□□□ -0.64
TMC1-206ENST00000497073 UBR1Q8IWV7 1749 aa11.06□□□□□ -0.64
TMC1-206ENST00000497073 ZNF326Q5BKZ1 582 aaKnown RBP11.05□□□□□ -0.64
TMC1-206ENST00000497073 ZSWIM6Q9HCJ5 1215 aa11.05□□□□□ -0.64
TMC1-206ENST00000497073 HCSTQ9UBK5 93 aa11.05□□□□□ -0.64
TMC1-206ENST00000497073 PIK3C2BO00750 1634 aa11.05□□□□□ -0.64
TMC1-206ENST00000497073 IQGAP3Q86VI3 1631 aa11.05□□□□□ -0.64
TMC1-206ENST00000497073 KDM5AP29375 1690 aaKnown RBP11.04□□□□□ -0.64
TMC1-206ENST00000497073 SYNMO15061 1565 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 G3V3G9 751 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 KCNA6P17658 529 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 LSM11P83369 360 aaKnown RBP eCLIP11.04□□□□□ -0.64
TMC1-206ENST00000497073 GPR153Q6NV75 609 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 SLC26A8Q96RN1 970 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 IQGAP1P46940 1657 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 ADGRB3O60242 1522 aa11.04□□□□□ -0.64
TMC1-206ENST00000497073 CFAP65Q6ZU64 1925 aaKnown RBP11.03□□□□□ -0.64
TMC1-206ENST00000497073 RIMS2Q9UQ26 1411 aa11.02□□□□□ -0.64
TMC1-206ENST00000497073 GCC2Q8IWJ2 1684 aa11.02□□□□□ -0.64
TMC1-206ENST00000497073 PIP4K2BP78356 416 aa11.02□□□□□ -0.65
TMC1-206ENST00000497073 TBX22Q9Y458 520 aa11.02□□□□□ -0.65
TMC1-206ENST00000497073 PLEKHG1Q9ULL1 1385 aa11.02□□□□□ -0.65
TMC1-206ENST00000497073 PROSER2Q86WR7 435 aaPredicted RBP11.01□□□□□ -0.65
TMC1-206ENST00000497073 VGFO15240 615 aaPredicted RBP10.99□□□□□ -0.65
TMC1-206ENST00000497073 NUTM2DQ5VT03 806 aaPredicted RBP10.99□□□□□ -0.65
TMC1-206ENST00000497073 ZNF467Q7Z7K2 595 aaPredicted RBP10.99□□□□□ -0.65
TMC1-206ENST00000497073 MPHOSPH9Q99550 1183 aa10.99□□□□□ -0.65
TMC1-206ENST00000497073 ZFYVE9O95405 1425 aa10.99□□□□□ -0.65
TMC1-206ENST00000497073 E9PCH4 1651 aa10.98□□□□□ -0.65
TMC1-206ENST00000497073 RPGRIP1LQ68CZ1 1315 aa10.98□□□□□ -0.65
TMC1-206ENST00000497073 SETD5Q9C0A6 1442 aa10.98□□□□□ -0.65
TMC1-206ENST00000497073 LRRC7Q96NW7 1537 aa10.98□□□□□ -0.65
TMC1-206ENST00000497073 PIK3R4Q99570 1358 aa10.97□□□□□ -0.65
TMC1-206ENST00000497073 TMEM131LA2VDJ0 1609 aa10.97□□□□□ -0.65
TMC1-206ENST00000497073 PSEN1P49768 467 aa10.96□□□□□ -0.65
TMC1-206ENST00000497073 C14orf37Q86TY3 774 aa10.96□□□□□ -0.65
TMC1-206ENST00000497073 IRX2Q9BZI1 471 aaPredicted RBP10.96□□□□□ -0.65
TMC1-206ENST00000497073 TMEM94Q12767 1356 aa10.95□□□□□ -0.66
TMC1-206ENST00000497073 MSH6P52701 1360 aa10.94□□□□□ -0.66
TMC1-206ENST00000497073 TRPM2O94759 1503 aa10.94□□□□□ -0.66
TMC1-206ENST00000497073 NKTRP30414 1462 aaKnown RBP10.93□□□□□ -0.66
TMC1-206ENST00000497073 CCDC144AA2RUR9 1427 aa10.93□□□□□ -0.66
TMC1-206ENST00000497073 NCOA3Q9Y6Q9 1424 aa10.93□□□□□ -0.66
TMC1-206ENST00000497073 AMOTL2Q9Y2J4 779 aa10.93□□□□□ -0.66
TMC1-206ENST00000497073 ATF3P18847 181 aa10.92□□□□□ -0.66
TMC1-206ENST00000497073 HSPA1LP34931 641 aa10.92□□□□□ -0.66
TMC1-206ENST00000497073 SPHKAPQ2M3C7 1700 aa10.92□□□□□ -0.66
TMC1-206ENST00000497073 DIP2AQ14689 1571 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms