RNA–Protein interactions for RNA: ENST00000496744.5

ECM1-206, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 1,030 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-206ENST00000496744 PHF23Q9BUL5 403 aaPredicted RBP15.96■□□□□ 0.15
ECM1-206ENST00000496744 KNDC1Q76NI1 1749 aa15.95■□□□□ 0.14
ECM1-206ENST00000496744 SOCS7O14512 581 aa15.94■□□□□ 0.14
ECM1-206ENST00000496744 ADGRB1O14514 1584 aa15.94■□□□□ 0.14
ECM1-206ENST00000496744 NHSL1Q5SYE7 1610 aa15.94■□□□□ 0.14
ECM1-206ENST00000496744 CDC42BPGQ6DT37 1551 aa15.93■□□□□ 0.14
ECM1-206ENST00000496744 LAMC1P11047 1609 aa15.93■□□□□ 0.14
ECM1-206ENST00000496744 SPATA31A6Q5VVP1 1343 aa15.93■□□□□ 0.14
ECM1-206ENST00000496744 LRRC59Q96AG4 307 aaKnown RBP15.91■□□□□ 0.14
ECM1-206ENST00000496744 SOS2Q07890 1332 aaPredicted RBP15.91■□□□□ 0.14
ECM1-206ENST00000496744 LRP6O75581 1613 aa15.9■□□□□ 0.14
ECM1-206ENST00000496744 PRAM1Q96QH2 718 aa15.9■□□□□ 0.14
ECM1-206ENST00000496744 SHPRHQ149N8 1683 aa15.89■□□□□ 0.13
ECM1-206ENST00000496744 NUTM2FA1L443 756 aa15.89■□□□□ 0.13
ECM1-206ENST00000496744 ESCO1Q5FWF5 840 aa15.89■□□□□ 0.13
ECM1-206ENST00000496744 POTEAQ6S8J7 498 aa15.89■□□□□ 0.13
ECM1-206ENST00000496744 DLC1Q96QB1 1528 aa15.89■□□□□ 0.13
ECM1-206ENST00000496744 TRAK1Q9UPV9 953 aa15.88■□□□□ 0.13
ECM1-206ENST00000496744 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
ECM1-206ENST00000496744 PNPLA6Q8IY17 1366 aa15.87■□□□□ 0.13
ECM1-206ENST00000496744 SIN3AQ96ST3 1273 aa15.86■□□□□ 0.13
ECM1-206ENST00000496744 FOXO3O43524 673 aa15.85■□□□□ 0.13
ECM1-206ENST00000496744 POGKQ9P215 609 aa15.85■□□□□ 0.13
ECM1-206ENST00000496744 FMN2Q9NZ56 1722 aa15.85■□□□□ 0.13
ECM1-206ENST00000496744 NUTM2BA6NNL0 878 aaPredicted RBP15.84■□□□□ 0.13
ECM1-206ENST00000496744 NUTM2EB1AL46 878 aaPredicted RBP15.84■□□□□ 0.13
ECM1-206ENST00000496744 NUTM2AQ8IVF1 878 aaPredicted RBP15.84■□□□□ 0.13
ECM1-206ENST00000496744 TRIM26Q12899 539 aaPredicted RBP15.83■□□□□ 0.12
ECM1-206ENST00000496744 NBPF1Q3BBV0 1214 aa15.83■□□□□ 0.12
ECM1-206ENST00000496744 L3MBTL2Q969R5 705 aa15.83■□□□□ 0.12
ECM1-206ENST00000496744 NPHP3Q7Z494 1330 aa15.83■□□□□ 0.12
ECM1-206ENST00000496744 PXDNQ92626 1479 aa15.83■□□□□ 0.12
ECM1-206ENST00000496744 XPCQ01831 940 aaPredicted RBP15.82■□□□□ 0.12
ECM1-206ENST00000496744 MEX3CQ5U5Q3 659 aaKnown RBP15.81■□□□□ 0.12
ECM1-206ENST00000496744 HIRIP3Q9BW71 556 aaPredicted RBP15.81■□□□□ 0.12
ECM1-206ENST00000496744 MINK1Q8N4C8 1332 aaPredicted RBP15.8■□□□□ 0.12
ECM1-206ENST00000496744 ADGRB2O60241 1585 aa15.79■□□□□ 0.12
ECM1-206ENST00000496744 NEUROD1Q13562 356 aa15.79■□□□□ 0.12
ECM1-206ENST00000496744 PHF8Q9UPP1 1060 aa15.79■□□□□ 0.12
ECM1-206ENST00000496744 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
ECM1-206ENST00000496744 PRR36Q9H6K5 1346 aa15.78■□□□□ 0.12
ECM1-206ENST00000496744 KIAA1210Q9ULL0 1709 aa15.78■□□□□ 0.12
ECM1-206ENST00000496744 WASLO00401 505 aaPredicted RBP15.78■□□□□ 0.12
ECM1-206ENST00000496744 USP32Q8NFA0 1604 aa15.78■□□□□ 0.12
ECM1-206ENST00000496744 ANKARQ7Z5J8 1434 aa15.77■□□□□ 0.12
ECM1-206ENST00000496744 ZNF772Q68DY9 489 aaPredicted RBP15.77■□□□□ 0.12
ECM1-206ENST00000496744 KRT28Q7Z3Y7 464 aa15.77■□□□□ 0.12
ECM1-206ENST00000496744 ARHGEF28Q8N1W1 1705 aaKnown RBP15.77■□□□□ 0.11
ECM1-206ENST00000496744 SPATA31A3Q5VYP0 1347 aa15.76■□□□□ 0.11
ECM1-206ENST00000496744 KIF1AQ12756 1690 aa15.76■□□□□ 0.11
ECM1-206ENST00000496744 COL22A1Q8NFW1 1626 aaPredicted RBP15.76■□□□□ 0.11
ECM1-206ENST00000496744 AFF2P51816 1311 aa15.75■□□□□ 0.11
ECM1-206ENST00000496744 ADAMTS2O95450 1211 aa15.75■□□□□ 0.11
ECM1-206ENST00000496744 PMFBP1Q8TBY8 1022 aa15.74■□□□□ 0.11
ECM1-206ENST00000496744 C8orf37Q96NL8 207 aa15.74■□□□□ 0.11
ECM1-206ENST00000496744 TULP4Q9NRJ4 1543 aa15.73■□□□□ 0.11
ECM1-206ENST00000496744 PSME1Q06323 249 aa15.71■□□□□ 0.11
ECM1-206ENST00000496744 NBPF8Q3BBV2 869 aa15.71■□□□□ 0.11
ECM1-206ENST00000496744 FNBP4Q8N3X1 1017 aaPredicted RBP15.71■□□□□ 0.11
ECM1-206ENST00000496744 NGLY1Q96IV0 654 aa15.71■□□□□ 0.11
ECM1-206ENST00000496744 CDK19Q9BWU1 502 aa15.71■□□□□ 0.11
ECM1-206ENST00000496744 SBNO1A3KN83 1393 aa15.71■□□□□ 0.11
ECM1-206ENST00000496744 EIF3AQ14152 1382 aaKnown RBP15.71■□□□□ 0.11
ECM1-206ENST00000496744 NUDT16Q96DE0 195 aaKnown RBP15.7■□□□□ 0.1
ECM1-206ENST00000496744 TNS3Q68CZ2 1445 aa15.69■□□□□ 0.1
ECM1-206ENST00000496744 RXRBP28702 533 aa15.69■□□□□ 0.1
ECM1-206ENST00000496744 QTRT2Q9H974 415 aaKnown RBP15.69■□□□□ 0.1
ECM1-206ENST00000496744 ATP7BP35670 1465 aa15.69■□□□□ 0.1
ECM1-206ENST00000496744 TRPM1Q7Z4N2 1603 aa15.68■□□□□ 0.1
ECM1-206ENST00000496744 CENPJQ9HC77 1338 aaPredicted RBP15.68■□□□□ 0.1
ECM1-206ENST00000496744 CABLES1Q8TDN4 633 aa15.67■□□□□ 0.1
ECM1-206ENST00000496744 USP21Q9UK80 565 aa15.66■□□□□ 0.1
ECM1-206ENST00000496744 BCL9LQ86UU0 1499 aa15.65■□□□□ 0.1
ECM1-206ENST00000496744 NGDNQ8NEJ9 315 aaKnown RBP15.65■□□□□ 0.1
ECM1-206ENST00000496744 CCDC61Q9Y6R9 512 aa15.65■□□□□ 0.1
ECM1-206ENST00000496744 TRPM3Q9HCF6 1732 aaPredicted RBP15.65■□□□□ 0.1
ECM1-206ENST00000496744 ARHGEF10O15013 1369 aa15.64■□□□□ 0.09
ECM1-206ENST00000496744 GPRASP1Q5JY77 1395 aa15.64■□□□□ 0.09
ECM1-206ENST00000496744 PLEKHG3A1L390 1219 aa15.64■□□□□ 0.09
ECM1-206ENST00000496744 RBM6P78332 1123 aaKnown RBP15.64■□□□□ 0.09
ECM1-206ENST00000496744 ROCK2O75116 1388 aaKnown RBP15.63■□□□□ 0.09
ECM1-206ENST00000496744 LMOD2Q6P5Q4 547 aa15.63■□□□□ 0.09
ECM1-206ENST00000496744 CDK12Q9NYV4 1490 aaPredicted RBP15.63■□□□□ 0.09
ECM1-206ENST00000496744 POLR3AO14802 1390 aaPredicted RBP15.62■□□□□ 0.09
ECM1-206ENST00000496744 ATRNO75882 1429 aa15.62■□□□□ 0.09
ECM1-206ENST00000496744 CABP2Q9NPB3 220 aa15.62■□□□□ 0.09
ECM1-206ENST00000496744 TRPC5Q9UL62 973 aaPredicted RBP15.62■□□□□ 0.09
ECM1-206ENST00000496744 MARF1Q9Y4F3 1742 aaKnown RBP15.62■□□□□ 0.09
ECM1-206ENST00000496744 ACEP12821 1306 aa15.62■□□□□ 0.09
ECM1-206ENST00000496744 ALS2Q96Q42 1657 aa15.61■□□□□ 0.09
ECM1-206ENST00000496744 PLEKHG5O94827 1062 aa15.61■□□□□ 0.09
ECM1-206ENST00000496744 SLIT2O94813 1529 aa15.61■□□□□ 0.09
ECM1-206ENST00000496744 TONSLQ96HA7 1378 aa15.61■□□□□ 0.09
ECM1-206ENST00000496744 TOPAZ1Q8N9V7 1692 aa15.6■□□□□ 0.09
ECM1-206ENST00000496744 SRPK2P78362 688 aaKnown RBP15.6■□□□□ 0.09
ECM1-206ENST00000496744 QRICH2Q9H0J4 1663 aa15.6■□□□□ 0.09
ECM1-206ENST00000496744 ITSN1Q15811 1721 aa15.6■□□□□ 0.09
ECM1-206ENST00000496744 RGS12O14924 1447 aa15.6■□□□□ 0.09
ECM1-206ENST00000496744 FAM83GA6ND36 823 aa15.59■□□□□ 0.09
ECM1-206ENST00000496744 PAK3O75914 559 aaPredicted RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms