RNA–Protein interactions for RNA: ENST00000496728.1

TSC22D4-206, Transcript of TSC22 domain family member 4, humanhuman

TSL 3

Gene TSC22D4, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-206ENST00000496728 KIAA1210Q9ULL0 1709 aa28.87■■■□□ 2.21
TSC22D4-206ENST00000496728 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.86■■■□□ 2.21
TSC22D4-206ENST00000496728 DLC1Q96QB1 1528 aa28.86■■■□□ 2.21
TSC22D4-206ENST00000496728 SAFB2Q14151 953 aaKnown RBP eCLIP28.86■■■□□ 2.21
TSC22D4-206ENST00000496728 ROCK2O75116 1388 aaKnown RBP28.83■■■□□ 2.21
TSC22D4-206ENST00000496728 NALCNQ8IZF0 1738 aa28.8■■■□□ 2.2
TSC22D4-206ENST00000496728 MST1RQ04912 1400 aa28.77■■■□□ 2.2
TSC22D4-206ENST00000496728 HSPA1LP34931 641 aa28.77■■■□□ 2.2
TSC22D4-206ENST00000496728 TRPM1Q7Z4N2 1603 aa28.76■■■□□ 2.19
TSC22D4-206ENST00000496728 MINK1Q8N4C8 1332 aaPredicted RBP28.75■■■□□ 2.19
TSC22D4-206ENST00000496728 CARD11Q9BXL7 1154 aa28.74■■■□□ 2.19
TSC22D4-206ENST00000496728 BRINP3Q76B58 766 aa28.73■■■□□ 2.19
TSC22D4-206ENST00000496728 GPRASP1Q5JY77 1395 aa28.73■■■□□ 2.19
TSC22D4-206ENST00000496728 C1orf167Q5SNV9 1468 aa28.72■■■□□ 2.19
TSC22D4-206ENST00000496728 CDC42BPGQ6DT37 1551 aa28.72■■■□□ 2.19
TSC22D4-206ENST00000496728 HIRIP3Q9BW71 556 aaPredicted RBP28.72■■■□□ 2.19
TSC22D4-206ENST00000496728 RALGAPBQ86X10 1494 aa28.71■■■□□ 2.19
TSC22D4-206ENST00000496728 CENPJQ9HC77 1338 aaPredicted RBP28.7■■■□□ 2.19
TSC22D4-206ENST00000496728 NUTM2FA1L443 756 aa28.7■■■□□ 2.18
TSC22D4-206ENST00000496728 ROBO1Q9Y6N7 1651 aa28.7■■■□□ 2.18
TSC22D4-206ENST00000496728 EIF3AQ14152 1382 aaKnown RBP28.67■■■□□ 2.18
TSC22D4-206ENST00000496728 ARHGEF28Q8N1W1 1705 aaKnown RBP28.67■■■□□ 2.18
TSC22D4-206ENST00000496728 ESCO1Q5FWF5 840 aa28.67■■■□□ 2.18
TSC22D4-206ENST00000496728 ORAI2Q96SN7 254 aa28.67■■■□□ 2.18
TSC22D4-206ENST00000496728 WASLO00401 505 aaPredicted RBP28.66■■■□□ 2.18
TSC22D4-206ENST00000496728 ADGRB2O60241 1585 aa28.62■■■□□ 2.17
TSC22D4-206ENST00000496728 CDK19Q9BWU1 502 aa28.6■■■□□ 2.17
TSC22D4-206ENST00000496728 ANKARQ7Z5J8 1434 aa28.58■■■□□ 2.17
TSC22D4-206ENST00000496728 FMN2Q9NZ56 1722 aa28.57■■■□□ 2.16
TSC22D4-206ENST00000496728 DDX17Q92841 729 aaKnown RBP28.56■■■□□ 2.16
TSC22D4-206ENST00000496728 PHF8Q9UPP1 1060 aa28.55■■■□□ 2.16
TSC22D4-206ENST00000496728 AHDC1Q5TGY3 1603 aaPredicted RBP28.54■■■□□ 2.16
TSC22D4-206ENST00000496728 NPHP3Q7Z494 1330 aa28.54■■■□□ 2.16
TSC22D4-206ENST00000496728 FOXO3O43524 673 aa28.54■■■□□ 2.16
TSC22D4-206ENST00000496728 EVC2Q86UK5 1308 aa28.53■■■□□ 2.16
TSC22D4-206ENST00000496728 SRPK2P78362 688 aaKnown RBP28.53■■■□□ 2.16
TSC22D4-206ENST00000496728 NUDT16Q96DE0 195 aaKnown RBP28.53■■■□□ 2.16
TSC22D4-206ENST00000496728 PRR36Q9H6K5 1346 aa28.52■■■□□ 2.16
TSC22D4-206ENST00000496728 TULP4Q9NRJ4 1543 aa28.52■■■□□ 2.16
TSC22D4-206ENST00000496728 PHLPP1O60346 1717 aa28.52■■■□□ 2.16
TSC22D4-206ENST00000496728 LRRC59Q96AG4 307 aaKnown RBP28.5■■■□□ 2.15
TSC22D4-206ENST00000496728 QRICH2Q9H0J4 1663 aa28.49■■■□□ 2.15
TSC22D4-206ENST00000496728 PMFBP1Q8TBY8 1022 aa28.49■■■□□ 2.15
TSC22D4-206ENST00000496728 SOS2Q07890 1332 aaPredicted RBP28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 ST20-MTHFSA0A0A6YYL1 179 aa28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 CABP2Q9NPB3 220 aa28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 CCDC61Q9Y6R9 512 aa28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 JCADQ9P266 1359 aa28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 SBNO2Q9Y2G9 1366 aa28.48■■■□□ 2.15
TSC22D4-206ENST00000496728 USP47Q96K76 1375 aa28.46■■■□□ 2.15
TSC22D4-206ENST00000496728 COL16A1Q07092 1604 aaPredicted RBP28.45■■■□□ 2.14
TSC22D4-206ENST00000496728 NHSL1Q5SYE7 1610 aa28.45■■■□□ 2.14
TSC22D4-206ENST00000496728 SLC24A1O60721 1099 aa28.45■■■□□ 2.14
TSC22D4-206ENST00000496728 XPCQ01831 940 aaPredicted RBP28.45■■■□□ 2.14
TSC22D4-206ENST00000496728 PSME1Q06323 249 aa28.44■■■□□ 2.14
TSC22D4-206ENST00000496728 KRT28Q7Z3Y7 464 aa28.44■■■□□ 2.14
TSC22D4-206ENST00000496728 NGDNQ8NEJ9 315 aaKnown RBP28.44■■■□□ 2.14
TSC22D4-206ENST00000496728 ATP7BP35670 1465 aa28.43■■■□□ 2.14
TSC22D4-206ENST00000496728 USP32Q8NFA0 1604 aa28.43■■■□□ 2.14
TSC22D4-206ENST00000496728 KIF1AQ12756 1690 aa28.42■■■□□ 2.14
TSC22D4-206ENST00000496728 TESK2Q96S53 571 aa28.4■■■□□ 2.14
TSC22D4-206ENST00000496728 RGPD8O14715 1765 aaPredicted RBP28.39■■■□□ 2.14
TSC22D4-206ENST00000496728 PLEKHG3A1L390 1219 aa28.39■■■□□ 2.14
TSC22D4-206ENST00000496728 PXDNQ92626 1479 aa28.37■■■□□ 2.13
TSC22D4-206ENST00000496728 SPATA31A6Q5VVP1 1343 aa28.36■■■□□ 2.13
TSC22D4-206ENST00000496728 ATAD2Q6PL18 1390 aa28.36■■■□□ 2.13
TSC22D4-206ENST00000496728 EIF4G2P78344 907 aaKnown RBP eCLIP28.35■■■□□ 2.13
TSC22D4-206ENST00000496728 CABP1Q9NZU7 370 aa28.35■■■□□ 2.13
TSC22D4-206ENST00000496728 PPIP5K1Q6PFW1 1433 aa28.35■■■□□ 2.13
TSC22D4-206ENST00000496728 ACEP12821 1306 aa28.34■■■□□ 2.13
TSC22D4-206ENST00000496728 PNPLA6Q8IY17 1366 aa28.34■■■□□ 2.13
TSC22D4-206ENST00000496728 TMF1P82094 1093 aa28.33■■■□□ 2.13
TSC22D4-206ENST00000496728 PUS7Q96PZ0 661 aaKnown RBP28.33■■■□□ 2.13
TSC22D4-206ENST00000496728 SPATA31A3Q5VYP0 1347 aa28.33■■■□□ 2.13
TSC22D4-206ENST00000496728 SBNO1A3KN83 1393 aa28.32■■■□□ 2.12
TSC22D4-206ENST00000496728 POLR3AO14802 1390 aaPredicted RBP28.31■■■□□ 2.12
TSC22D4-206ENST00000496728 ITSN1Q15811 1721 aa28.31■■■□□ 2.12
TSC22D4-206ENST00000496728 NUTM2BA6NNL0 878 aaPredicted RBP28.3■■■□□ 2.12
TSC22D4-206ENST00000496728 NUTM2EB1AL46 878 aaPredicted RBP28.3■■■□□ 2.12
TSC22D4-206ENST00000496728 NUTM2AQ8IVF1 878 aaPredicted RBP28.3■■■□□ 2.12
TSC22D4-206ENST00000496728 LMOD2Q6P5Q4 547 aa28.29■■■□□ 2.12
TSC22D4-206ENST00000496728 PAK3O75914 559 aaPredicted RBP28.28■■■□□ 2.12
TSC22D4-206ENST00000496728 HSPA5P11021 654 aaKnown RBP28.28■■■□□ 2.12
TSC22D4-206ENST00000496728 SHPRHQ149N8 1683 aa28.27■■■□□ 2.12
TSC22D4-206ENST00000496728 CDCA8Q53HL2 280 aa28.27■■■□□ 2.12
TSC22D4-206ENST00000496728 TNS3Q68CZ2 1445 aa28.26■■■□□ 2.12
TSC22D4-206ENST00000496728 TOPAZ1Q8N9V7 1692 aa28.26■■■□□ 2.12
TSC22D4-206ENST00000496728 TMC1Q8TDI8 760 aa28.26■■■□□ 2.11
TSC22D4-206ENST00000496728 ARHGEF10O15013 1369 aa28.24■■■□□ 2.11
TSC22D4-206ENST00000496728 MEX3CQ5U5Q3 659 aaKnown RBP28.24■■■□□ 2.11
TSC22D4-206ENST00000496728 ZNF692Q9BU19 519 aaPredicted RBP28.24■■■□□ 2.11
TSC22D4-206ENST00000496728 MED1Q15648 1581 aaPredicted RBP28.24■■■□□ 2.11
TSC22D4-206ENST00000496728 DISP3Q9P2K9 1392 aa28.23■■■□□ 2.11
TSC22D4-206ENST00000496728 PHF23Q9BUL5 403 aaPredicted RBP28.22■■■□□ 2.11
TSC22D4-206ENST00000496728 SLC12A5Q9H2X9 1139 aa28.2■■■□□ 2.1
TSC22D4-206ENST00000496728 BRD4O60885 1362 aaPredicted RBP28.19■■■□□ 2.1
TSC22D4-206ENST00000496728 HDGFL2Q7Z4V5 671 aaPredicted RBP28.18■■■□□ 2.1
TSC22D4-206ENST00000496728 NINLQ9Y2I6 1382 aa28.17■■■□□ 2.1
TSC22D4-206ENST00000496728 PLEKHG5O94827 1062 aa28.17■■■□□ 2.1
TSC22D4-206ENST00000496728 HAP1P54257 671 aaPredicted RBP28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms