RNA–Protein interactions for RNA: ENST00000496677.5

CLDN12-213, Transcript of claudin 12, humanhuman

TSL 1 (best)

Gene CLDN12, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12-213ENST00000496677 SIRT1Q96EB6 747 aa18.24■□□□□ 0.51
CLDN12-213ENST00000496677 SHPRHQ149N8 1683 aa18.24■□□□□ 0.51
CLDN12-213ENST00000496677 LRP6O75581 1613 aa18.23■□□□□ 0.51
CLDN12-213ENST00000496677 ORAI2Q96SN7 254 aa18.23■□□□□ 0.51
CLDN12-213ENST00000496677 YTHDC2Q9H6S0 1430 aaKnown RBP18.23■□□□□ 0.51
CLDN12-213ENST00000496677 PLEKHH1Q9ULM0 1364 aa18.22■□□□□ 0.51
CLDN12-213ENST00000496677 LAMC1P11047 1609 aa18.22■□□□□ 0.51
CLDN12-213ENST00000496677 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
CLDN12-213ENST00000496677 KNDC1Q76NI1 1749 aa18.2■□□□□ 0.5
CLDN12-213ENST00000496677 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
CLDN12-213ENST00000496677 SOS2Q07890 1332 aaPredicted RBP18.19■□□□□ 0.5
CLDN12-213ENST00000496677 DHX57Q6P158 1386 aaKnown RBP18.17■□□□□ 0.5
CLDN12-213ENST00000496677 STAC3Q96MF2 364 aa18.17■□□□□ 0.5
CLDN12-213ENST00000496677 PNPLA6Q8IY17 1366 aa18.17■□□□□ 0.5
CLDN12-213ENST00000496677 DCAF11Q8TEB1 546 aa18.15■□□□□ 0.5
CLDN12-213ENST00000496677 ADGRB1O14514 1584 aa18.15■□□□□ 0.5
CLDN12-213ENST00000496677 KDM2AQ9Y2K7 1162 aa18.14■□□□□ 0.49
CLDN12-213ENST00000496677 NUTM2BA6NNL0 878 aaPredicted RBP18.13■□□□□ 0.49
CLDN12-213ENST00000496677 NUTM2EB1AL46 878 aaPredicted RBP18.13■□□□□ 0.49
CLDN12-213ENST00000496677 ESCO1Q5FWF5 840 aa18.13■□□□□ 0.49
CLDN12-213ENST00000496677 NUTM2AQ8IVF1 878 aaPredicted RBP18.13■□□□□ 0.49
CLDN12-213ENST00000496677 DLC1Q96QB1 1528 aa18.12■□□□□ 0.49
CLDN12-213ENST00000496677 MEX3CQ5U5Q3 659 aaKnown RBP18.11■□□□□ 0.49
CLDN12-213ENST00000496677 PRAM1Q96QH2 718 aa18.11■□□□□ 0.49
CLDN12-213ENST00000496677 FMN2Q9NZ56 1722 aa18.1■□□□□ 0.49
CLDN12-213ENST00000496677 PXDNQ92626 1479 aa18.1■□□□□ 0.49
CLDN12-213ENST00000496677 NPHP3Q7Z494 1330 aa18.09■□□□□ 0.49
CLDN12-213ENST00000496677 NUTM2FA1L443 756 aa18.09■□□□□ 0.49
CLDN12-213ENST00000496677 FOXO3O43524 673 aa18.09■□□□□ 0.49
CLDN12-213ENST00000496677 ZNF772Q68DY9 489 aaPredicted RBP18.09■□□□□ 0.49
CLDN12-213ENST00000496677 TRAK1Q9UPV9 953 aa18.07■□□□□ 0.48
CLDN12-213ENST00000496677 SAFB2Q14151 953 aaKnown RBP eCLIP18.06■□□□□ 0.48
CLDN12-213ENST00000496677 COL22A1Q8NFW1 1626 aaPredicted RBP18.05■□□□□ 0.48
CLDN12-213ENST00000496677 AFF2P51816 1311 aa18.05■□□□□ 0.48
CLDN12-213ENST00000496677 POGKQ9P215 609 aa18.05■□□□□ 0.48
CLDN12-213ENST00000496677 XPCQ01831 940 aaPredicted RBP18.04■□□□□ 0.48
CLDN12-213ENST00000496677 C8orf37Q96NL8 207 aa18.03■□□□□ 0.48
CLDN12-213ENST00000496677 ADGRB2O60241 1585 aa18.03■□□□□ 0.48
CLDN12-213ENST00000496677 RGPD8O14715 1765 aaPredicted RBP18.02■□□□□ 0.48
CLDN12-213ENST00000496677 PHF8Q9UPP1 1060 aa18.02■□□□□ 0.48
CLDN12-213ENST00000496677 SPATA31A3Q5VYP0 1347 aa18.01■□□□□ 0.47
CLDN12-213ENST00000496677 ADAMTS2O95450 1211 aa18.01■□□□□ 0.47
CLDN12-213ENST00000496677 KRT28Q7Z3Y7 464 aa18.01■□□□□ 0.47
CLDN12-213ENST00000496677 KIF1AQ12756 1690 aa18.01■□□□□ 0.47
CLDN12-213ENST00000496677 ANKARQ7Z5J8 1434 aa18■□□□□ 0.47
CLDN12-213ENST00000496677 USP32Q8NFA0 1604 aa18■□□□□ 0.47
CLDN12-213ENST00000496677 RXRBP28702 533 aa17.99■□□□□ 0.47
CLDN12-213ENST00000496677 FNBP4Q8N3X1 1017 aaPredicted RBP17.99■□□□□ 0.47
CLDN12-213ENST00000496677 HIRIP3Q9BW71 556 aaPredicted RBP17.99■□□□□ 0.47
CLDN12-213ENST00000496677 MINK1Q8N4C8 1332 aaPredicted RBP17.98■□□□□ 0.47
CLDN12-213ENST00000496677 PRR36Q9H6K5 1346 aa17.98■□□□□ 0.47
CLDN12-213ENST00000496677 WASLO00401 505 aaPredicted RBP17.98■□□□□ 0.47
CLDN12-213ENST00000496677 NGLY1Q96IV0 654 aa17.98■□□□□ 0.47
CLDN12-213ENST00000496677 QTRT2Q9H974 415 aaKnown RBP17.98■□□□□ 0.47
CLDN12-213ENST00000496677 KIAA1210Q9ULL0 1709 aa17.98■□□□□ 0.47
CLDN12-213ENST00000496677 CDK12Q9NYV4 1490 aaPredicted RBP17.97■□□□□ 0.47
CLDN12-213ENST00000496677 NBPF1Q3BBV0 1214 aa17.97■□□□□ 0.47
CLDN12-213ENST00000496677 ARHGEF28Q8N1W1 1705 aaKnown RBP17.95■□□□□ 0.46
CLDN12-213ENST00000496677 SBNO1A3KN83 1393 aa17.95■□□□□ 0.46
CLDN12-213ENST00000496677 PSME1Q06323 249 aa17.95■□□□□ 0.46
CLDN12-213ENST00000496677 L3MBTL2Q969R5 705 aa17.95■□□□□ 0.46
CLDN12-213ENST00000496677 SIN3AQ96ST3 1273 aa17.95■□□□□ 0.46
CLDN12-213ENST00000496677 RBM6P78332 1123 aaKnown RBP17.94■□□□□ 0.46
CLDN12-213ENST00000496677 PMFBP1Q8TBY8 1022 aa17.94■□□□□ 0.46
CLDN12-213ENST00000496677 TULP4Q9NRJ4 1543 aa17.93■□□□□ 0.46
CLDN12-213ENST00000496677 USP21Q9UK80 565 aa17.93■□□□□ 0.46
CLDN12-213ENST00000496677 EIF3AQ14152 1382 aaKnown RBP17.92■□□□□ 0.46
CLDN12-213ENST00000496677 TNS3Q68CZ2 1445 aa17.92■□□□□ 0.46
CLDN12-213ENST00000496677 POTEDQ86YR6 584 aa17.92■□□□□ 0.46
CLDN12-213ENST00000496677 BCL9LQ86UU0 1499 aa17.92■□□□□ 0.46
CLDN12-213ENST00000496677 ATRNO75882 1429 aa17.9■□□□□ 0.46
CLDN12-213ENST00000496677 MARF1Q9Y4F3 1742 aaKnown RBP17.9■□□□□ 0.46
CLDN12-213ENST00000496677 NUDT16Q96DE0 195 aaKnown RBP17.89■□□□□ 0.45
CLDN12-213ENST00000496677 CDK19Q9BWU1 502 aa17.89■□□□□ 0.45
CLDN12-213ENST00000496677 TRPC5Q9UL62 973 aaPredicted RBP17.89■□□□□ 0.45
CLDN12-213ENST00000496677 TRPM3Q9HCF6 1732 aaPredicted RBP17.89■□□□□ 0.45
CLDN12-213ENST00000496677 RGS12O14924 1447 aa17.89■□□□□ 0.45
CLDN12-213ENST00000496677 CABLES1Q8TDN4 633 aa17.88■□□□□ 0.45
CLDN12-213ENST00000496677 UPF1Q92900 1129 aaKnown RBP eCLIP17.88■□□□□ 0.45
CLDN12-213ENST00000496677 ARHGEF10O15013 1369 aa17.88■□□□□ 0.45
CLDN12-213ENST00000496677 ATP7BP35670 1465 aa17.88■□□□□ 0.45
CLDN12-213ENST00000496677 SLIT2O94813 1529 aa17.87■□□□□ 0.45
CLDN12-213ENST00000496677 NEUROD1Q13562 356 aa17.86■□□□□ 0.45
CLDN12-213ENST00000496677 GPRASP1Q5JY77 1395 aa17.85■□□□□ 0.45
CLDN12-213ENST00000496677 ALS2Q96Q42 1657 aa17.84■□□□□ 0.45
CLDN12-213ENST00000496677 PLEKHG3A1L390 1219 aa17.84■□□□□ 0.45
CLDN12-213ENST00000496677 NGDNQ8NEJ9 315 aaKnown RBP17.84■□□□□ 0.45
CLDN12-213ENST00000496677 CENPJQ9HC77 1338 aaPredicted RBP17.83■□□□□ 0.44
CLDN12-213ENST00000496677 LMOD2Q6P5Q4 547 aa17.83■□□□□ 0.44
CLDN12-213ENST00000496677 UNC5CLQ8IV45 518 aa17.83■□□□□ 0.44
CLDN12-213ENST00000496677 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.44
CLDN12-213ENST00000496677 POLR3AO14802 1390 aaPredicted RBP17.82■□□□□ 0.44
CLDN12-213ENST00000496677 ABCA3Q99758 1704 aa17.82■□□□□ 0.44
CLDN12-213ENST00000496677 TRIM26Q12899 539 aaPredicted RBP17.82■□□□□ 0.44
CLDN12-213ENST00000496677 GJD4Q96KN9 370 aaPredicted RBP17.82■□□□□ 0.44
CLDN12-213ENST00000496677 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
CLDN12-213ENST00000496677 TRPM1Q7Z4N2 1603 aa17.81■□□□□ 0.44
CLDN12-213ENST00000496677 FAM83GA6ND36 823 aa17.81■□□□□ 0.44
CLDN12-213ENST00000496677 NBPF8Q3BBV2 869 aa17.81■□□□□ 0.44
CLDN12-213ENST00000496677 ITSN1Q15811 1721 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms