RNA–Protein interactions for RNA: ENST00000496489.5

NCK1-212, Transcript of NCK adaptor protein 1, humanhuman

TSL 3

Gene NCK1, Length 422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-212ENST00000496489 GUCA2AQ02747 115 aa5.73□□□□□ -1.49
NCK1-212ENST00000496489 FUT2Q10981 343 aa5.73□□□□□ -1.49
NCK1-212ENST00000496489 KMT5BQ4FZB7 885 aa5.73□□□□□ -1.49
NCK1-212ENST00000496489 HLA-CQ95604 372 aa5.73□□□□□ -1.49
NCK1-212ENST00000496489 PCDHB3Q9Y5E6 796 aa5.73□□□□□ -1.49
NCK1-212ENST00000496489 TRAF7Q6Q0C0 670 aa5.72□□□□□ -1.49
NCK1-212ENST00000496489 GNL3Q9BVP2 549 aaKnown RBP eCLIP5.72□□□□□ -1.49
NCK1-212ENST00000496489 FDX1P10109 184 aa5.71□□□□□ -1.5
NCK1-212ENST00000496489 QPCTQ16769 361 aa5.71□□□□□ -1.5
NCK1-212ENST00000496489 GRIPAP1Q4V328 841 aa5.71□□□□□ -1.5
NCK1-212ENST00000496489 CABLES1Q8TDN4 633 aa5.71□□□□□ -1.5
NCK1-212ENST00000496489 NUTM2BA6NNL0 878 aaPredicted RBP5.7□□□□□ -1.5
NCK1-212ENST00000496489 NUTM2EB1AL46 878 aaPredicted RBP5.7□□□□□ -1.5
NCK1-212ENST00000496489 NRG2O14511 850 aaPredicted RBP5.7□□□□□ -1.5
NCK1-212ENST00000496489 GJA5P36382 358 aa5.7□□□□□ -1.5
NCK1-212ENST00000496489 RFC5P40937 340 aa5.7□□□□□ -1.5
NCK1-212ENST00000496489 NUTM2DQ5VT03 806 aaPredicted RBP5.7□□□□□ -1.5
NCK1-212ENST00000496489 BLOC1S3Q6QNY0 202 aa5.7□□□□□ -1.5
NCK1-212ENST00000496489 NUTM2AQ8IVF1 878 aaPredicted RBP5.7□□□□□ -1.5
NCK1-212ENST00000496489 PCDHB15Q9Y5E8 787 aa5.7□□□□□ -1.5
NCK1-212ENST00000496489 ACTN4O43707 911 aaKnown RBP5.69□□□□□ -1.5
NCK1-212ENST00000496489 ATP6V1AP38606 617 aa5.69□□□□□ -1.5
NCK1-212ENST00000496489 FLIIQ13045 1269 aa5.69□□□□□ -1.5
NCK1-212ENST00000496489 TUSC1Q2TAM9 212 aa5.69□□□□□ -1.5
NCK1-212ENST00000496489 PUS10Q3MIT2 529 aaKnown RBP5.69□□□□□ -1.5
NCK1-212ENST00000496489 FBXO31Q5XUX0 539 aaPredicted RBP5.69□□□□□ -1.5
NCK1-212ENST00000496489 ZBTB3Q9H5J0 574 aa5.69□□□□□ -1.5
NCK1-212ENST00000496489 PCDHGC3Q9UN70 934 aa5.69□□□□□ -1.5
NCK1-212ENST00000496489 C6orf229H3BNL8 230 aa5.68□□□□□ -1.5
NCK1-212ENST00000496489 LILRB3O75022 631 aa5.68□□□□□ -1.5
NCK1-212ENST00000496489 HRCP23327 699 aa5.68□□□□□ -1.5
NCK1-212ENST00000496489 MCM6Q14566 821 aa5.68□□□□□ -1.5
NCK1-212ENST00000496489 PDZRN3Q9UPQ7 1066 aa5.68□□□□□ -1.5
NCK1-212ENST00000496489 RNF223E7ERA6 249 aa5.67□□□□□ -1.5
NCK1-212ENST00000496489 SLC19A1P41440 591 aa5.67□□□□□ -1.5
NCK1-212ENST00000496489 RTL5Q5HYW3 569 aaPredicted RBP5.67□□□□□ -1.5
NCK1-212ENST00000496489 PRPF38BQ5VTL8 546 aaKnown RBP5.67□□□□□ -1.5
NCK1-212ENST00000496489 PPP2R2DQ66LE6 453 aa5.67□□□□□ -1.5
NCK1-212ENST00000496489 TSC1Q92574 1164 aa5.67□□□□□ -1.5
NCK1-212ENST00000496489 NR1I2O75469 434 aa5.66□□□□□ -1.5
NCK1-212ENST00000496489 AP1G2O75843 785 aa5.66□□□□□ -1.5
NCK1-212ENST00000496489 UBTFP17480 764 aaKnown RBP5.66□□□□□ -1.5
NCK1-212ENST00000496489 MTMR2Q13614 643 aa5.66□□□□□ -1.5
NCK1-212ENST00000496489 MORN1Q5T089 497 aa5.66□□□□□ -1.5
NCK1-212ENST00000496489 SYMPKQ92797 1274 aaKnown RBP5.66□□□□□ -1.5
NCK1-212ENST00000496489 LCE2BO14633 110 aa5.65□□□□□ -1.5
NCK1-212ENST00000496489 USP17L8P0C7I0 530 aa5.65□□□□□ -1.5
NCK1-212ENST00000496489 TMEM259Q4ZIN3 620 aa5.65□□□□□ -1.5
NCK1-212ENST00000496489 ANKLE1Q8NAG6 615 aa5.65□□□□□ -1.5
NCK1-212ENST00000496489 SLC27A5Q9Y2P5 690 aa5.65□□□□□ -1.5
NCK1-212ENST00000496489 CFAP99D6REC4 459 aa5.64□□□□□ -1.51
NCK1-212ENST00000496489 PPEF1O14829 653 aaPredicted RBP5.64□□□□□ -1.51
NCK1-212ENST00000496489 Q3C1V9 767 aa5.64□□□□□ -1.51
NCK1-212ENST00000496489 SCUBE3Q8IX30 993 aa5.64□□□□□ -1.51
NCK1-212ENST00000496489 HELBQ8NG08 1087 aaPredicted RBP5.64□□□□□ -1.51
NCK1-212ENST00000496489 SNRKQ9NRH2 765 aa5.64□□□□□ -1.51
NCK1-212ENST00000496489 SPDYE5A6NIY4 337 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 TLL1O43897 1013 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 S1PR4O95977 384 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 ADH1BP00325 375 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 SPRYD7Q5W111 196 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 RNF19BQ6ZMZ0 732 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 ZNF598Q86UK7 904 aaKnown RBP5.63□□□□□ -1.51
NCK1-212ENST00000496489 BANK1Q8NDB2 785 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 PRR7Q8TB68 274 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 SLC6A16Q9GZN6 736 aa5.63□□□□□ -1.51
NCK1-212ENST00000496489 LIAT1Q6ZQX7 453 aa5.62□□□□□ -1.51
NCK1-212ENST00000496489 RETREG3Q86VR2 466 aa5.62□□□□□ -1.51
NCK1-212ENST00000496489 MTMR14Q8NCE2 650 aa5.62□□□□□ -1.51
NCK1-212ENST00000496489 EMID1Q96A84 441 aaPredicted RBP5.62□□□□□ -1.51
NCK1-212ENST00000496489 CLUAP1Q96AJ1 413 aa5.62□□□□□ -1.51
NCK1-212ENST00000496489 ZMYND15Q9H091 742 aa5.62□□□□□ -1.51
NCK1-212ENST00000496489 SUPT5HO00267 1087 aaKnown RBP5.61□□□□□ -1.51
NCK1-212ENST00000496489 FMNL1O95466 1100 aaPredicted RBP5.61□□□□□ -1.51
NCK1-212ENST00000496489 ZNF787Q6DD87 383 aa5.61□□□□□ -1.51
NCK1-212ENST00000496489 POM121Q96HA1 1249 aa5.61□□□□□ -1.51
NCK1-212ENST00000496489 APBB1O00213 710 aa5.6□□□□□ -1.51
NCK1-212ENST00000496489 RAD21O60216 631 aa5.6□□□□□ -1.51
NCK1-212ENST00000496489 CTDSPL2Q05D32 466 aa5.6□□□□□ -1.51
NCK1-212ENST00000496489 TRIM67Q6ZTA4 783 aa5.6□□□□□ -1.51
NCK1-212ENST00000496489 SPSB2Q99619 263 aa5.6□□□□□ -1.51
NCK1-212ENST00000496489 USB1Q9BQ65 265 aaKnown RBP5.6□□□□□ -1.51
NCK1-212ENST00000496489 DGAT1O75907 488 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PRR20EP86478 221 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PRR20CP86479 221 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PRR20DP86480 221 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PRR20BP86481 221 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PRR20AP86496 221 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 ZNF697Q5TEC3 545 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 BRICD5Q6PL45 260 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 LRRN4Q8WUT4 740 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 HMX1Q9NP08 348 aaPredicted RBP5.59□□□□□ -1.51
NCK1-212ENST00000496489 COG6Q9Y2V7 657 aa5.59□□□□□ -1.51
NCK1-212ENST00000496489 PER1O15534 1290 aaPredicted RBP5.58□□□□□ -1.52
NCK1-212ENST00000496489 PKDCCQ504Y2 493 aa5.58□□□□□ -1.52
NCK1-212ENST00000496489 PROSER2Q86WR7 435 aaPredicted RBP5.58□□□□□ -1.52
NCK1-212ENST00000496489 THAP11Q96EK4 314 aa5.58□□□□□ -1.52
NCK1-212ENST00000496489 PRDM9Q9NQV7 894 aa5.58□□□□□ -1.52
NCK1-212ENST00000496489 SALL2Q9Y467 1007 aaPredicted RBP5.58□□□□□ -1.52
NCK1-212ENST00000496489 A6NJR5 290 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms