RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 STK26Q9P289 416 aa21.1■□□□□ 0.97
VTI1A-209ENST00000496445 ORAI2Q96SN7 254 aa21.09■□□□□ 0.97
VTI1A-209ENST00000496445 PNPLA6Q8IY17 1366 aa21.09■□□□□ 0.97
VTI1A-209ENST00000496445 WAPLQ7Z5K2 1190 aa21.08■□□□□ 0.97
VTI1A-209ENST00000496445 HRCP23327 699 aa21.07■□□□□ 0.96
VTI1A-209ENST00000496445 C14orf93Q9H972 538 aaKnown RBP21.07■□□□□ 0.96
VTI1A-209ENST00000496445 ADGRB1O14514 1584 aa21.06■□□□□ 0.96
VTI1A-209ENST00000496445 COL22A1Q8NFW1 1626 aaPredicted RBP21.05■□□□□ 0.96
VTI1A-209ENST00000496445 CFAP70Q5T0N1 1121 aa21.05■□□□□ 0.96
VTI1A-209ENST00000496445 LRRC59Q96AG4 307 aaKnown RBP21.05■□□□□ 0.96
VTI1A-209ENST00000496445 MEX3CQ5U5Q3 659 aaKnown RBP21.04■□□□□ 0.96
VTI1A-209ENST00000496445 SOS2Q07890 1332 aaPredicted RBP21.04■□□□□ 0.96
VTI1A-209ENST00000496445 PXDNQ92626 1479 aa21.03■□□□□ 0.96
VTI1A-209ENST00000496445 DLC1Q96QB1 1528 aa21.03■□□□□ 0.96
VTI1A-209ENST00000496445 RGPD8O14715 1765 aaPredicted RBP21.02■□□□□ 0.96
VTI1A-209ENST00000496445 NUTM2BA6NNL0 878 aaPredicted RBP21.02■□□□□ 0.96
VTI1A-209ENST00000496445 NUTM2EB1AL46 878 aaPredicted RBP21.02■□□□□ 0.96
VTI1A-209ENST00000496445 NUTM2AQ8IVF1 878 aaPredicted RBP21.02■□□□□ 0.96
VTI1A-209ENST00000496445 KIF1AQ12756 1690 aa21.02■□□□□ 0.95
VTI1A-209ENST00000496445 DHX57Q6P158 1386 aaKnown RBP21■□□□□ 0.95
VTI1A-209ENST00000496445 ADGRB2O60241 1585 aa20.99■□□□□ 0.95
VTI1A-209ENST00000496445 SIRT1Q96EB6 747 aa20.99■□□□□ 0.95
VTI1A-209ENST00000496445 ESCO1Q5FWF5 840 aa20.98■□□□□ 0.95
VTI1A-209ENST00000496445 USP32Q8NFA0 1604 aa20.97■□□□□ 0.95
VTI1A-209ENST00000496445 ZNF772Q68DY9 489 aaPredicted RBP20.97■□□□□ 0.95
VTI1A-209ENST00000496445 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
VTI1A-209ENST00000496445 NPHP3Q7Z494 1330 aa20.96■□□□□ 0.95
VTI1A-209ENST00000496445 ARHGEF28Q8N1W1 1705 aaKnown RBP20.95■□□□□ 0.94
VTI1A-209ENST00000496445 MARF1Q9Y4F3 1742 aaKnown RBP20.95■□□□□ 0.94
VTI1A-209ENST00000496445 AFF2P51816 1311 aa20.95■□□□□ 0.94
VTI1A-209ENST00000496445 DCAF11Q8TEB1 546 aa20.94■□□□□ 0.94
VTI1A-209ENST00000496445 PRAM1Q96QH2 718 aa20.94■□□□□ 0.94
VTI1A-209ENST00000496445 KDM2AQ9Y2K7 1162 aa20.93■□□□□ 0.94
VTI1A-209ENST00000496445 C8orf37Q96NL8 207 aa20.92■□□□□ 0.94
VTI1A-209ENST00000496445 FOXO3O43524 673 aa20.91■□□□□ 0.94
VTI1A-209ENST00000496445 XPCQ01831 940 aaPredicted RBP20.91■□□□□ 0.94
VTI1A-209ENST00000496445 SAFB2Q14151 953 aaKnown RBP eCLIP20.91■□□□□ 0.94
VTI1A-209ENST00000496445 KIAA1210Q9ULL0 1709 aa20.9■□□□□ 0.94
VTI1A-209ENST00000496445 CDK12Q9NYV4 1490 aaPredicted RBP20.89■□□□□ 0.94
VTI1A-209ENST00000496445 ADAMTS2O95450 1211 aa20.88■□□□□ 0.93
VTI1A-209ENST00000496445 ABCA3Q99758 1704 aa20.87■□□□□ 0.93
VTI1A-209ENST00000496445 STAC3Q96MF2 364 aa20.87■□□□□ 0.93
VTI1A-209ENST00000496445 TRAK1Q9UPV9 953 aa20.87■□□□□ 0.93
VTI1A-209ENST00000496445 POGKQ9P215 609 aa20.86■□□□□ 0.93
VTI1A-209ENST00000496445 ANKARQ7Z5J8 1434 aa20.86■□□□□ 0.93
VTI1A-209ENST00000496445 TULP4Q9NRJ4 1543 aa20.85■□□□□ 0.93
VTI1A-209ENST00000496445 RXRBP28702 533 aa20.85■□□□□ 0.93
VTI1A-209ENST00000496445 TRPM3Q9HCF6 1732 aaPredicted RBP20.84■□□□□ 0.93
VTI1A-209ENST00000496445 RGS12O14924 1447 aa20.84■□□□□ 0.93
VTI1A-209ENST00000496445 SPATA31A3Q5VYP0 1347 aa20.83■□□□□ 0.93
VTI1A-209ENST00000496445 PHF8Q9UPP1 1060 aa20.83■□□□□ 0.93
VTI1A-209ENST00000496445 TNS3Q68CZ2 1445 aa20.83■□□□□ 0.93
VTI1A-209ENST00000496445 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.82■□□□□ 0.92
VTI1A-209ENST00000496445 NGLY1Q96IV0 654 aa20.82■□□□□ 0.92
VTI1A-209ENST00000496445 HIRIP3Q9BW71 556 aaPredicted RBP20.82■□□□□ 0.92
VTI1A-209ENST00000496445 ITSN1Q15811 1721 aa20.81■□□□□ 0.92
VTI1A-209ENST00000496445 QTRT2Q9H974 415 aaKnown RBP20.81■□□□□ 0.92
VTI1A-209ENST00000496445 MINK1Q8N4C8 1332 aaPredicted RBP20.8■□□□□ 0.92
VTI1A-209ENST00000496445 KRT28Q7Z3Y7 464 aa20.8■□□□□ 0.92
VTI1A-209ENST00000496445 ALS2Q96Q42 1657 aa20.8■□□□□ 0.92
VTI1A-209ENST00000496445 PRR36Q9H6K5 1346 aa20.79■□□□□ 0.92
VTI1A-209ENST00000496445 ATRNO75882 1429 aa20.79■□□□□ 0.92
VTI1A-209ENST00000496445 FNBP4Q8N3X1 1017 aaPredicted RBP20.79■□□□□ 0.92
VTI1A-209ENST00000496445 TOPAZ1Q8N9V7 1692 aa20.78■□□□□ 0.92
VTI1A-209ENST00000496445 ATP7BP35670 1465 aa20.78■□□□□ 0.92
VTI1A-209ENST00000496445 BCL9LQ86UU0 1499 aa20.78■□□□□ 0.92
VTI1A-209ENST00000496445 SBNO1A3KN83 1393 aa20.78■□□□□ 0.92
VTI1A-209ENST00000496445 RBM6P78332 1123 aaKnown RBP20.78■□□□□ 0.92
VTI1A-209ENST00000496445 USP21Q9UK80 565 aa20.78■□□□□ 0.92
VTI1A-209ENST00000496445 EIF3AQ14152 1382 aaKnown RBP20.77■□□□□ 0.92
VTI1A-209ENST00000496445 PLCH1Q4KWH8 1693 aa20.77■□□□□ 0.91
VTI1A-209ENST00000496445 CRYBG1Q9Y4K1 1723 aa20.76■□□□□ 0.91
VTI1A-209ENST00000496445 WASLO00401 505 aaPredicted RBP20.76■□□□□ 0.91
VTI1A-209ENST00000496445 PMFBP1Q8TBY8 1022 aa20.76■□□□□ 0.91
VTI1A-209ENST00000496445 EP400Q96L91 3159 aa20.75■□□□□ 0.91
VTI1A-209ENST00000496445 SLIT2O94813 1529 aa20.74■□□□□ 0.91
VTI1A-209ENST00000496445 PSME1Q06323 249 aa20.73■□□□□ 0.91
VTI1A-209ENST00000496445 UPF1Q92900 1129 aaKnown RBP eCLIP20.73■□□□□ 0.918e-7■■■■■ 27.8
VTI1A-209ENST00000496445 TRPC5Q9UL62 973 aaPredicted RBP20.73■□□□□ 0.91
VTI1A-209ENST00000496445 NWD2Q9ULI1 1742 aa20.73■□□□□ 0.91
VTI1A-209ENST00000496445 TRPM1Q7Z4N2 1603 aa20.72■□□□□ 0.91
VTI1A-209ENST00000496445 NBPF1Q3BBV0 1214 aa20.72■□□□□ 0.91
VTI1A-209ENST00000496445 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
VTI1A-209ENST00000496445 QRICH2Q9H0J4 1663 aa20.71■□□□□ 0.91
VTI1A-209ENST00000496445 GLI3P10071 1580 aa20.71■□□□□ 0.91
VTI1A-209ENST00000496445 CABLES1Q8TDN4 633 aa20.69■□□□□ 0.9
VTI1A-209ENST00000496445 NRAPQ86VF7 1730 aa20.68■□□□□ 0.9
VTI1A-209ENST00000496445 SIN3AQ96ST3 1273 aa20.68■□□□□ 0.9
VTI1A-209ENST00000496445 L3MBTL2Q969R5 705 aa20.67■□□□□ 0.9
VTI1A-209ENST00000496445 LMOD2Q6P5Q4 547 aa20.66■□□□□ 0.9
VTI1A-209ENST00000496445 GPRASP1Q5JY77 1395 aa20.66■□□□□ 0.9
VTI1A-209ENST00000496445 PHRF1Q9P1Y6 1649 aaKnown RBP20.66■□□□□ 0.9
VTI1A-209ENST00000496445 RALGAPBQ86X10 1494 aa20.65■□□□□ 0.9
VTI1A-209ENST00000496445 PLEKHG5O94827 1062 aa20.65■□□□□ 0.9
VTI1A-209ENST00000496445 NUDT16Q96DE0 195 aaKnown RBP20.65■□□□□ 0.9
VTI1A-209ENST00000496445 UNC5CLQ8IV45 518 aa20.64■□□□□ 0.89
VTI1A-209ENST00000496445 CDK19Q9BWU1 502 aa20.64■□□□□ 0.89
VTI1A-209ENST00000496445 BRWD3Q6RI45 1802 aa20.63■□□□□ 0.89
VTI1A-209ENST00000496445 COL14A1Q05707 1796 aaKnown RBP20.63■□□□□ 0.89
VTI1A-209ENST00000496445 HAP1P54257 671 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms