RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 NKTRP30414 1462 aaKnown RBP30.5■■■□□ 2.47
ECHDC3-205ENST00000496136 MINK1Q8N4C8 1332 aaPredicted RBP30.5■■■□□ 2.47
ECHDC3-205ENST00000496136 C11orf95C9JLR9 678 aaPredicted RBP30.49■■■□□ 2.47
ECHDC3-205ENST00000496136 RBM33Q96EV2 1170 aaKnown RBP30.49■■■□□ 2.47
ECHDC3-205ENST00000496136 TMF1P82094 1093 aa30.46■■■□□ 2.47
ECHDC3-205ENST00000496136 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.46■■■□□ 2.47
ECHDC3-205ENST00000496136 DISP3Q9P2K9 1392 aa30.43■■■□□ 2.46
ECHDC3-205ENST00000496136 EVC2Q86UK5 1308 aa30.41■■■□□ 2.46
ECHDC3-205ENST00000496136 TMEM94Q12767 1356 aa30.4■■■□□ 2.46
ECHDC3-205ENST00000496136 WASHC2AQ641Q2 1341 aa30.39■■■□□ 2.45
ECHDC3-205ENST00000496136 WASLO00401 505 aaPredicted RBP30.38■■■□□ 2.45
ECHDC3-205ENST00000496136 LRRC7Q96NW7 1537 aa30.38■■■□□ 2.45
ECHDC3-205ENST00000496136 KIF7Q2M1P5 1343 aa30.37■■■□□ 2.45
ECHDC3-205ENST00000496136 C14orf37Q86TY3 774 aa30.37■■■□□ 2.45
ECHDC3-205ENST00000496136 CDK19Q9BWU1 502 aa30.37■■■□□ 2.45
ECHDC3-205ENST00000496136 TULP4Q9NRJ4 1543 aa30.37■■■□□ 2.45
ECHDC3-205ENST00000496136 NCOA3Q9Y6Q9 1424 aa30.37■■■□□ 2.45
ECHDC3-205ENST00000496136 CDCA8Q53HL2 280 aa30.36■■■□□ 2.45
ECHDC3-205ENST00000496136 ADGRB2O60241 1585 aa30.34■■■□□ 2.45
ECHDC3-205ENST00000496136 ADGRL3Q9HAR2 1447 aa30.34■■■□□ 2.45
ECHDC3-205ENST00000496136 CCDC7Q96M83 1385 aa30.34■■■□□ 2.45
ECHDC3-205ENST00000496136 NALCNQ8IZF0 1738 aa30.34■■■□□ 2.45
ECHDC3-205ENST00000496136 C19orf44Q9H6X5 657 aa30.33■■■□□ 2.45
ECHDC3-205ENST00000496136 CABP2Q9NPB3 220 aa30.33■■■□□ 2.45
ECHDC3-205ENST00000496136 LTBP4Q8N2S1 1624 aa30.33■■■□□ 2.45
ECHDC3-205ENST00000496136 XIRP1Q702N8 1843 aaKnown RBP30.33■■■□□ 2.45
ECHDC3-205ENST00000496136 SRPK2P78362 688 aaKnown RBP30.33■■■□□ 2.45
ECHDC3-205ENST00000496136 PUS7Q96PZ0 661 aaKnown RBP30.32■■■□□ 2.44
ECHDC3-205ENST00000496136 POLR3GLQ9BT43 218 aa30.32■■■□□ 2.44
ECHDC3-205ENST00000496136 FBXO41Q8TF61 875 aa30.31■■■□□ 2.44
ECHDC3-205ENST00000496136 CDC42BPGQ6DT37 1551 aa30.25■■■□□ 2.43
ECHDC3-205ENST00000496136 NUTM2FA1L443 756 aa30.25■■■□□ 2.43
ECHDC3-205ENST00000496136 NUDT16Q96DE0 195 aaKnown RBP30.23■■■□□ 2.43
ECHDC3-205ENST00000496136 MSH6P52701 1360 aa30.23■■■□□ 2.43
ECHDC3-205ENST00000496136 PRR36Q9H6K5 1346 aa30.22■■■□□ 2.43
ECHDC3-205ENST00000496136 ATAD2Q6PL18 1390 aa30.21■■■□□ 2.43
ECHDC3-205ENST00000496136 ATF3P18847 181 aa30.2■■■□□ 2.43
ECHDC3-205ENST00000496136 DCCP43146 1447 aa30.2■■■□□ 2.43
ECHDC3-205ENST00000496136 FMN2Q9NZ56 1722 aa30.2■■■□□ 2.42
ECHDC3-205ENST00000496136 CCDC61Q9Y6R9 512 aa30.19■■■□□ 2.42
ECHDC3-205ENST00000496136 DDX10Q13206 875 aaKnown RBP30.18■■■□□ 2.42
ECHDC3-205ENST00000496136 CADPS2Q86UW7 1296 aa30.18■■■□□ 2.42
ECHDC3-205ENST00000496136 ATP7BP35670 1465 aa30.18■■■□□ 2.42
ECHDC3-205ENST00000496136 TMC1Q8TDI8 760 aa30.18■■■□□ 2.42
ECHDC3-205ENST00000496136 SLC12A5Q9H2X9 1139 aa30.18■■■□□ 2.42
ECHDC3-205ENST00000496136 RGPD8O14715 1765 aaPredicted RBP30.16■■■□□ 2.42
ECHDC3-205ENST00000496136 USP32Q8NFA0 1604 aa30.16■■■□□ 2.42
ECHDC3-205ENST00000496136 CABP1Q9NZU7 370 aa30.15■■■□□ 2.42
ECHDC3-205ENST00000496136 ANKARQ7Z5J8 1434 aa30.15■■■□□ 2.42
ECHDC3-205ENST00000496136 MYOM1P52179 1685 aa30.13■■■□□ 2.41
ECHDC3-205ENST00000496136 PPIP5K1Q6PFW1 1433 aa30.11■■■□□ 2.41
ECHDC3-205ENST00000496136 NINLQ9Y2I6 1382 aa30.11■■■□□ 2.41
ECHDC3-205ENST00000496136 MST1RQ04912 1400 aa30.1■■■□□ 2.41
ECHDC3-205ENST00000496136 C1orf167Q5SNV9 1468 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 PLEKHG3A1L390 1219 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 PANK3Q9H999 370 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 TOPAZ1Q8N9V7 1692 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 ESCO1Q5FWF5 840 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 SLAIN2Q9P270 581 aa30.08■■■□□ 2.41
ECHDC3-205ENST00000496136 ORAI2Q96SN7 254 aa30.07■■■□□ 2.4
ECHDC3-205ENST00000496136 ITSN1Q15811 1721 aa30.06■■■□□ 2.4
ECHDC3-205ENST00000496136 PMFBP1Q8TBY8 1022 aa30.05■■■□□ 2.4
ECHDC3-205ENST00000496136 CERKQ8TCT0 537 aa30.03■■■□□ 2.4
ECHDC3-205ENST00000496136 TERF2IPQ9NYB0 399 aa30.03■■■□□ 2.4
ECHDC3-205ENST00000496136 PHF8Q9UPP1 1060 aa30.03■■■□□ 2.4
ECHDC3-205ENST00000496136 CD163L1Q9NR16 1453 aa30.03■■■□□ 2.4
ECHDC3-205ENST00000496136 ANKRD36BQ8N2N9 1353 aa30.02■■■□□ 2.4
ECHDC3-205ENST00000496136 ACEP12821 1306 aa30.02■■■□□ 2.4
ECHDC3-205ENST00000496136 CARD14Q9BXL6 1004 aa30■■■□□ 2.39
ECHDC3-205ENST00000496136 CPSF1Q10570 1443 aaKnown RBP30■■■□□ 2.39
ECHDC3-205ENST00000496136 PER1O15534 1290 aaPredicted RBP30■■■□□ 2.39
ECHDC3-205ENST00000496136 HDGFL2Q7Z4V5 671 aaPredicted RBP30■■■□□ 2.39
ECHDC3-205ENST00000496136 A0A1W2PP64 1363 aa29.99■■■□□ 2.39
ECHDC3-205ENST00000496136 NGDNQ8NEJ9 315 aaKnown RBP29.99■■■□□ 2.39
ECHDC3-205ENST00000496136 ZNF692Q9BU19 519 aaPredicted RBP29.98■■■□□ 2.39
ECHDC3-205ENST00000496136 POLR3AO14802 1390 aaPredicted RBP29.98■■■□□ 2.39
ECHDC3-205ENST00000496136 IQSEC2Q5JU85 1478 aa29.98■■■□□ 2.39
ECHDC3-205ENST00000496136 BRINP3Q76B58 766 aa29.95■■■□□ 2.39
ECHDC3-205ENST00000496136 FOXO3O43524 673 aa29.95■■■□□ 2.38
ECHDC3-205ENST00000496136 KTN1Q86UP2 1357 aaKnown RBP29.94■■■□□ 2.38
ECHDC3-205ENST00000496136 TOM1O60784 492 aa29.94■■■□□ 2.38
ECHDC3-205ENST00000496136 AKAP12Q02952 1782 aa29.93■■■□□ 2.38
ECHDC3-205ENST00000496136 DIEXFQ68CQ4 756 aaKnown RBP29.92■■■□□ 2.38
ECHDC3-205ENST00000496136 KNSTRNQ9Y448 316 aa29.92■■■□□ 2.38
ECHDC3-205ENST00000496136 KIF1AQ12756 1690 aa29.9■■■□□ 2.38
ECHDC3-205ENST00000496136 PSME1Q06323 249 aa29.9■■■□□ 2.38
ECHDC3-205ENST00000496136 NSD3Q9BZ95 1437 aa29.89■■■□□ 2.38
ECHDC3-205ENST00000496136 UBAP1LF5GYI3 381 aa29.89■■■□□ 2.38
ECHDC3-205ENST00000496136 USP6P35125 1406 aa29.89■■■□□ 2.37
ECHDC3-205ENST00000496136 MON2Q7Z3U7 1717 aa29.88■■■□□ 2.37
ECHDC3-205ENST00000496136 DDX17Q92841 729 aaKnown RBP29.87■■■□□ 2.37
ECHDC3-205ENST00000496136 EDC4Q6P2E9 1401 aaKnown RBP29.85■■■□□ 2.37
ECHDC3-205ENST00000496136 AMER1Q5JTC6 1135 aaPredicted RBP29.85■■■□□ 2.37
ECHDC3-205ENST00000496136 SSH2Q76I76 1423 aa29.84■■■□□ 2.37
ECHDC3-205ENST00000496136 XPCQ01831 940 aaPredicted RBP29.84■■■□□ 2.37
ECHDC3-205ENST00000496136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP29.84■■■□□ 2.37
ECHDC3-205ENST00000496136 NPHP3Q7Z494 1330 aa29.83■■■□□ 2.37
ECHDC3-205ENST00000496136 KRT28Q7Z3Y7 464 aa29.83■■■□□ 2.37
ECHDC3-205ENST00000496136 TTC21BQ7Z4L5 1316 aa29.83■■■□□ 2.37
ECHDC3-205ENST00000496136 CGNL1Q0VF96 1302 aa29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms