RNA–Protein interactions for RNA: ENST00000495899.1

MRPL55-233, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2

Gene MRPL55, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-233ENST00000495899 TMEM132EQ6IEE7 984 aa17.94■□□□□ 0.46
MRPL55-233ENST00000495899 SIRT1Q96EB6 747 aa17.94■□□□□ 0.46
MRPL55-233ENST00000495899 TECPR2O15040 1411 aa17.93■□□□□ 0.46
MRPL55-233ENST00000495899 ADGRL3Q9HAR2 1447 aa17.92■□□□□ 0.46
MRPL55-233ENST00000495899 STK26Q9P289 416 aa17.92■□□□□ 0.46
MRPL55-233ENST00000495899 YTHDC2Q9H6S0 1430 aaKnown RBP17.9■□□□□ 0.46
MRPL55-233ENST00000495899 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.89■□□□□ 0.46
MRPL55-233ENST00000495899 LAMC1P11047 1609 aa17.89■□□□□ 0.45
MRPL55-233ENST00000495899 ASXL1Q8IXJ9 1541 aa17.88■□□□□ 0.45
MRPL55-233ENST00000495899 SIN3AQ96ST3 1273 aa17.88■□□□□ 0.45
MRPL55-233ENST00000495899 WAPLQ7Z5K2 1190 aa17.86■□□□□ 0.45
MRPL55-233ENST00000495899 NEUROD1Q13562 356 aa17.85■□□□□ 0.45
MRPL55-233ENST00000495899 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
MRPL55-233ENST00000495899 MST1RQ04912 1400 aa17.84■□□□□ 0.45
MRPL55-233ENST00000495899 ROBO1Q9Y6N7 1651 aa17.83■□□□□ 0.45
MRPL55-233ENST00000495899 ADGRB1O14514 1584 aa17.83■□□□□ 0.45
MRPL55-233ENST00000495899 BRINP3Q76B58 766 aa17.83■□□□□ 0.44
MRPL55-233ENST00000495899 KNDC1Q76NI1 1749 aa17.81■□□□□ 0.44
MRPL55-233ENST00000495899 PLEKHH1Q9ULM0 1364 aa17.81■□□□□ 0.44
MRPL55-233ENST00000495899 PRAM1Q96QH2 718 aa17.81■□□□□ 0.44
MRPL55-233ENST00000495899 DLC1Q96QB1 1528 aa17.81■□□□□ 0.44
MRPL55-233ENST00000495899 NALCNQ8IZF0 1738 aa17.81■□□□□ 0.44
MRPL55-233ENST00000495899 PCGF6Q9BYE7 350 aa17.8■□□□□ 0.44
MRPL55-233ENST00000495899 POGKQ9P215 609 aa17.8■□□□□ 0.44
MRPL55-233ENST00000495899 TRAK1Q9UPV9 953 aa17.8■□□□□ 0.44
MRPL55-233ENST00000495899 C1orf167Q5SNV9 1468 aa17.8■□□□□ 0.44
MRPL55-233ENST00000495899 CDC42BPGQ6DT37 1551 aa17.78■□□□□ 0.44
MRPL55-233ENST00000495899 SPINK5Q9NQ38 1064 aaPredicted RBP17.77■□□□□ 0.44
MRPL55-233ENST00000495899 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
MRPL55-233ENST00000495899 ORAI2Q96SN7 254 aa17.75■□□□□ 0.43
MRPL55-233ENST00000495899 AHDC1Q5TGY3 1603 aaPredicted RBP17.75■□□□□ 0.43
MRPL55-233ENST00000495899 KIAA1210Q9ULL0 1709 aa17.75■□□□□ 0.43
MRPL55-233ENST00000495899 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
MRPL55-233ENST00000495899 ZNF219Q9P2Y4 722 aaPredicted RBP17.74■□□□□ 0.43
MRPL55-233ENST00000495899 JCADQ9P266 1359 aa17.74■□□□□ 0.43
MRPL55-233ENST00000495899 ESCO1Q5FWF5 840 aa17.73■□□□□ 0.43
MRPL55-233ENST00000495899 TONSLQ96HA7 1378 aa17.73■□□□□ 0.43
MRPL55-233ENST00000495899 DISP3Q9P2K9 1392 aa17.73■□□□□ 0.43
MRPL55-233ENST00000495899 LRRC59Q96AG4 307 aaKnown RBP17.72■□□□□ 0.43
MRPL55-233ENST00000495899 PHLPP1O60346 1717 aa17.72■□□□□ 0.43
MRPL55-233ENST00000495899 CLSPNQ9HAW4 1339 aa17.72■□□□□ 0.43
MRPL55-233ENST00000495899 CAPN15O75808 1086 aa17.71■□□□□ 0.43
MRPL55-233ENST00000495899 COL16A1Q07092 1604 aaPredicted RBP17.7■□□□□ 0.42
MRPL55-233ENST00000495899 SLC24A1O60721 1099 aa17.7■□□□□ 0.42
MRPL55-233ENST00000495899 NUTM2FA1L443 756 aa17.69■□□□□ 0.42
MRPL55-233ENST00000495899 SOS2Q07890 1332 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-233ENST00000495899 SPATA31A6Q5VVP1 1343 aa17.69■□□□□ 0.42
MRPL55-233ENST00000495899 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
MRPL55-233ENST00000495899 MINK1Q8N4C8 1332 aaPredicted RBP17.69■□□□□ 0.42
MRPL55-233ENST00000495899 EIF3AQ14152 1382 aaKnown RBP17.68■□□□□ 0.42
MRPL55-233ENST00000495899 WASLO00401 505 aaPredicted RBP17.68■□□□□ 0.42
MRPL55-233ENST00000495899 DDX17Q92841 729 aaKnown RBP17.68■□□□□ 0.42
MRPL55-233ENST00000495899 HIRIP3Q9BW71 556 aaPredicted RBP17.67■□□□□ 0.42
MRPL55-233ENST00000495899 ADGRB2O60241 1585 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 MED1Q15648 1581 aaPredicted RBP17.66■□□□□ 0.42
MRPL55-233ENST00000495899 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 NHSL1Q5SYE7 1610 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 FOXO3O43524 673 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 NBPF8Q3BBV2 869 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 TIMELESSQ9UNS1 1208 aa17.66■□□□□ 0.42
MRPL55-233ENST00000495899 ROCK2O75116 1388 aaKnown RBP17.66■□□□□ 0.42
MRPL55-233ENST00000495899 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
MRPL55-233ENST00000495899 PHF8Q9UPP1 1060 aa17.65■□□□□ 0.42
MRPL55-233ENST00000495899 CENPJQ9HC77 1338 aaPredicted RBP17.64■□□□□ 0.41
MRPL55-233ENST00000495899 GPRASP1Q5JY77 1395 aa17.63■□□□□ 0.41
MRPL55-233ENST00000495899 ARHGEF28Q8N1W1 1705 aaKnown RBP17.62■□□□□ 0.41
MRPL55-233ENST00000495899 TRPM1Q7Z4N2 1603 aa17.61■□□□□ 0.41
MRPL55-233ENST00000495899 CDK19Q9BWU1 502 aa17.61■□□□□ 0.41
MRPL55-233ENST00000495899 PNPLA6Q8IY17 1366 aa17.61■□□□□ 0.41
MRPL55-233ENST00000495899 PSME1Q06323 249 aa17.6■□□□□ 0.41
MRPL55-233ENST00000495899 TULP4Q9NRJ4 1543 aa17.6■□□□□ 0.41
MRPL55-233ENST00000495899 SHPRHQ149N8 1683 aa17.59■□□□□ 0.41
MRPL55-233ENST00000495899 PXDNQ92626 1479 aa17.59■□□□□ 0.41
MRPL55-233ENST00000495899 PRR36Q9H6K5 1346 aa17.59■□□□□ 0.41
MRPL55-233ENST00000495899 KRT28Q7Z3Y7 464 aa17.59■□□□□ 0.41
MRPL55-233ENST00000495899 NUDT16Q96DE0 195 aaKnown RBP17.59■□□□□ 0.41
MRPL55-233ENST00000495899 CARD11Q9BXL7 1154 aa17.59■□□□□ 0.41
MRPL55-233ENST00000495899 KIF1AQ12756 1690 aa17.58■□□□□ 0.41
MRPL55-233ENST00000495899 XPCQ01831 940 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-233ENST00000495899 PMFBP1Q8TBY8 1022 aa17.57■□□□□ 0.4
MRPL55-233ENST00000495899 CCER1Q8TC90 406 aaPredicted RBP17.57■□□□□ 0.4
MRPL55-233ENST00000495899 CCDC61Q9Y6R9 512 aa17.57■□□□□ 0.4
MRPL55-233ENST00000495899 RALGAPBQ86X10 1494 aa17.56■□□□□ 0.4
MRPL55-233ENST00000495899 USP32Q8NFA0 1604 aa17.55■□□□□ 0.4
MRPL55-233ENST00000495899 SPATA31A3Q5VYP0 1347 aa17.55■□□□□ 0.4
MRPL55-233ENST00000495899 NUTM2BA6NNL0 878 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-233ENST00000495899 NUTM2EB1AL46 878 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-233ENST00000495899 MEX3CQ5U5Q3 659 aaKnown RBP17.55■□□□□ 0.4
MRPL55-233ENST00000495899 NUTM2AQ8IVF1 878 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-233ENST00000495899 RGS17Q9UGC6 210 aaPredicted RBP17.55■□□□□ 0.4
MRPL55-233ENST00000495899 SBNO1A3KN83 1393 aa17.54■□□□□ 0.4
MRPL55-233ENST00000495899 EVC2Q86UK5 1308 aa17.54■□□□□ 0.4
MRPL55-233ENST00000495899 SRPK2P78362 688 aaKnown RBP17.54■□□□□ 0.4
MRPL55-233ENST00000495899 LRP6O75581 1613 aa17.54■□□□□ 0.4
MRPL55-233ENST00000495899 ATP7BP35670 1465 aa17.53■□□□□ 0.4
MRPL55-233ENST00000495899 PLEKHG3A1L390 1219 aa17.53■□□□□ 0.4
MRPL55-233ENST00000495899 ILDR2Q71H61 639 aa17.53■□□□□ 0.4
MRPL55-233ENST00000495899 NGDNQ8NEJ9 315 aaKnown RBP17.53■□□□□ 0.4
MRPL55-233ENST00000495899 SBNO2Q9Y2G9 1366 aa17.52■□□□□ 0.39
MRPL55-233ENST00000495899 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms