RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 TYW1BQ6NUM6 668 aa12.19□□□□□ -0.46
EPHA4-213ENST00000495693 SIN3AQ96ST3 1273 aa12.19□□□□□ -0.46
EPHA4-213ENST00000495693 ANKRD50Q9ULJ7 1429 aa12.19□□□□□ -0.46
EPHA4-213ENST00000495693 KDM5DQ9BY66 1539 aa12.18□□□□□ -0.46
EPHA4-213ENST00000495693 POTEEQ6S8J3 1075 aa12.18□□□□□ -0.46
EPHA4-213ENST00000495693 ARHGAP33O14559 1287 aa12.17□□□□□ -0.46
EPHA4-213ENST00000495693 ZNF777Q9ULD5 760 aaPredicted RBP12.17□□□□□ -0.46
EPHA4-213ENST00000495693 ZCCHC11Q5TAX3 1644 aaKnown RBP12.17□□□□□ -0.46
EPHA4-213ENST00000495693 ARHGAP5Q13017 1502 aa12.16□□□□□ -0.46
EPHA4-213ENST00000495693 ZNF644Q9H582 1327 aaPredicted RBP12.16□□□□□ -0.46
EPHA4-213ENST00000495693 RPRD2Q5VT52 1461 aaKnown RBP12.16□□□□□ -0.46
EPHA4-213ENST00000495693 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.16□□□□□ -0.46
EPHA4-213ENST00000495693 CDC42BPBQ9Y5S2 1711 aa12.15□□□□□ -0.46
EPHA4-213ENST00000495693 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
EPHA4-213ENST00000495693 DDX12PQ92771 950 aa12.15□□□□□ -0.46
EPHA4-213ENST00000495693 KDM6BO15054 1643 aa12.15□□□□□ -0.47
EPHA4-213ENST00000495693 MBD5Q9P267 1494 aa12.14□□□□□ -0.47
EPHA4-213ENST00000495693 PLXNC1O60486 1568 aa12.14□□□□□ -0.47
EPHA4-213ENST00000495693 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
EPHA4-213ENST00000495693 ANKRD30BQ9BXX2 1392 aa12.14□□□□□ -0.47
EPHA4-213ENST00000495693 TTC37Q6PGP7 1564 aa12.13□□□□□ -0.47
EPHA4-213ENST00000495693 PLCH2O75038 1416 aa12.12□□□□□ -0.47
EPHA4-213ENST00000495693 SLC24A1O60721 1099 aa12.12□□□□□ -0.47
EPHA4-213ENST00000495693 PTPREP23469 700 aa12.12□□□□□ -0.47
EPHA4-213ENST00000495693 KCNH8Q96L42 1107 aa12.12□□□□□ -0.47
EPHA4-213ENST00000495693 KIF15Q9NS87 1388 aa12.12□□□□□ -0.47
EPHA4-213ENST00000495693 ERCC6L2Q5T890 1561 aa12.11□□□□□ -0.47
EPHA4-213ENST00000495693 DENND4BO75064 1496 aaPredicted RBP12.11□□□□□ -0.47
EPHA4-213ENST00000495693 PZPP20742 1482 aa12.11□□□□□ -0.47
EPHA4-213ENST00000495693 LSM11P83369 360 aaKnown RBP eCLIP12.11□□□□□ -0.47
EPHA4-213ENST00000495693 EN1Q05925 392 aaPredicted RBP12.11□□□□□ -0.47
EPHA4-213ENST00000495693 NBR1Q14596 966 aa12.11□□□□□ -0.47
EPHA4-213ENST00000495693 EFCAB2Q5VUJ9 269 aa12.11□□□□□ -0.47
EPHA4-213ENST00000495693 OSBPP22059 807 aa12.1□□□□□ -0.47
EPHA4-213ENST00000495693 SYCP2Q9BX26 1530 aa12.1□□□□□ -0.47
EPHA4-213ENST00000495693 WDR7Q9Y4E6 1490 aa12.09□□□□□ -0.47
EPHA4-213ENST00000495693 AXIN2Q9Y2T1 843 aa12.09□□□□□ -0.47
EPHA4-213ENST00000495693 DUOX2Q9NRD8 1548 aa12.09□□□□□ -0.47
EPHA4-213ENST00000495693 ERBINQ96RT1 1412 aa12.09□□□□□ -0.47
EPHA4-213ENST00000495693 GRXCR2A6NFK2 248 aa12.08□□□□□ -0.48
EPHA4-213ENST00000495693 SEMA3EO15041 775 aa12.08□□□□□ -0.48
EPHA4-213ENST00000495693 KCNK17Q96T54 332 aa12.08□□□□□ -0.48
EPHA4-213ENST00000495693 ABCC1P33527 1531 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 ARHGEF12Q9NZN5 1544 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 TESPA1A2RU30 521 aaPredicted RBP12.07□□□□□ -0.48
EPHA4-213ENST00000495693 RTEL1-TNFRSF6BF6WH68 1400 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 TK2O00142 265 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 UNC13BO14795 1591 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 MLLT3P42568 568 aaPredicted RBP12.07□□□□□ -0.48
EPHA4-213ENST00000495693 PSEN2P49810 448 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 SLC4A5Q9BY07 1137 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 TEX14Q8IWB6 1497 aa12.07□□□□□ -0.48
EPHA4-213ENST00000495693 NUP155O75694 1391 aa12.06□□□□□ -0.48
EPHA4-213ENST00000495693 PPP1R3GB7ZBB8 358 aa12.06□□□□□ -0.48
EPHA4-213ENST00000495693 EIF4G2P78344 907 aaKnown RBP eCLIP12.06□□□□□ -0.48
EPHA4-213ENST00000495693 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
EPHA4-213ENST00000495693 ABCA9Q8IUA7 1624 aa12.05□□□□□ -0.48
EPHA4-213ENST00000495693 CFAP74Q9C0B2 1584 aa12.05□□□□□ -0.48
EPHA4-213ENST00000495693 PRIM1P49642 420 aaKnown RBP12.04□□□□□ -0.48
EPHA4-213ENST00000495693 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
EPHA4-213ENST00000495693 DMRTA1Q5VZB9 504 aa12.04□□□□□ -0.48
EPHA4-213ENST00000495693 FAM135AQ9P2D6 1515 aa12.02□□□□□ -0.48
EPHA4-213ENST00000495693 IQGAP3Q86VI3 1631 aa12.02□□□□□ -0.49
EPHA4-213ENST00000495693 MAP3K7O43318 606 aa12.02□□□□□ -0.49
EPHA4-213ENST00000495693 ANP32CO43423 234 aa12.02□□□□□ -0.49
EPHA4-213ENST00000495693 RBM33Q96EV2 1170 aaKnown RBP12.02□□□□□ -0.49
EPHA4-213ENST00000495693 MAGI2Q86UL8 1455 aa12.02□□□□□ -0.49
EPHA4-213ENST00000495693 CCER2I3L3R5 266 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 SMYD5Q6GMV2 418 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 ADGRD1Q6QNK2 874 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 ANKRD13DQ6ZTN6 518 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 SPNS2Q8IVW8 549 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 L3MBTL2Q969R5 705 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 ZBED2Q9BTP6 218 aa12.01□□□□□ -0.49
EPHA4-213ENST00000495693 CERKQ8TCT0 537 aa12□□□□□ -0.49
EPHA4-213ENST00000495693 UHRF1BP1Q6BDS2 1440 aa12□□□□□ -0.49
EPHA4-213ENST00000495693 COL9A1P20849 921 aa11.99□□□□□ -0.49
EPHA4-213ENST00000495693 TSR1Q2NL82 804 aaKnown RBP11.99□□□□□ -0.49
EPHA4-213ENST00000495693 VPS9D1Q9Y2B5 631 aa11.99□□□□□ -0.49
EPHA4-213ENST00000495693 ARID4BQ4LE39 1312 aaPredicted RBP11.99□□□□□ -0.49
EPHA4-213ENST00000495693 FANCAO15360 1455 aa11.98□□□□□ -0.49
EPHA4-213ENST00000495693 ATP10AO60312 1499 aa11.98□□□□□ -0.49
EPHA4-213ENST00000495693 POLR1AO95602 1720 aaPredicted RBP11.97□□□□□ -0.49
EPHA4-213ENST00000495693 EIF2AK4Q9P2K8 1649 aaKnown RBP11.97□□□□□ -0.49
EPHA4-213ENST00000495693 CCDC144AA2RUR9 1427 aa11.97□□□□□ -0.49
EPHA4-213ENST00000495693 ASXL2Q76L83 1435 aa11.97□□□□□ -0.49
EPHA4-213ENST00000495693 ONECUT3O60422 494 aaPredicted RBP11.97□□□□□ -0.49
EPHA4-213ENST00000495693 ZFYVE16Q7Z3T8 1539 aa11.96□□□□□ -0.49
EPHA4-213ENST00000495693 SPAG9O60271 1321 aaKnown RBP11.96□□□□□ -0.49
EPHA4-213ENST00000495693 HRO43593 1189 aa11.96□□□□□ -0.49
EPHA4-213ENST00000495693 DDX10Q13206 875 aaKnown RBP11.96□□□□□ -0.49
EPHA4-213ENST00000495693 STAC3Q96MF2 364 aa11.96□□□□□ -0.49
EPHA4-213ENST00000495693 RALGAPBQ86X10 1494 aa11.95□□□□□ -0.5
EPHA4-213ENST00000495693 KANK1Q14678 1352 aa11.95□□□□□ -0.5
EPHA4-213ENST00000495693 INO80Q9ULG1 1556 aaPredicted RBP11.95□□□□□ -0.5
EPHA4-213ENST00000495693 ADGRL1O94910 1474 aa11.95□□□□□ -0.5
EPHA4-213ENST00000495693 HSPA5P11021 654 aaKnown RBP11.94□□□□□ -0.5
EPHA4-213ENST00000495693 ATP7AQ04656 1500 aa11.94□□□□□ -0.5
EPHA4-213ENST00000495693 ZNF518AQ6AHZ1 1483 aa11.94□□□□□ -0.5
EPHA4-213ENST00000495693 ROCK2O75116 1388 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms