RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 ROBO2Q9HCK4 1378 aa20.56■□□□□ 0.88
COL1A1-209ENST00000495677 HFM1A2PYH4 1435 aa20.55■□□□□ 0.88
COL1A1-209ENST00000495677 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.55■□□□□ 0.88
COL1A1-209ENST00000495677 MYOM2P54296 1465 aa20.55■□□□□ 0.88
COL1A1-209ENST00000495677 BCL9LQ86UU0 1499 aa20.54■□□□□ 0.88
COL1A1-209ENST00000495677 PPLO60437 1756 aa20.54■□□□□ 0.88
COL1A1-209ENST00000495677 RPGRIP1LQ68CZ1 1315 aa20.53■□□□□ 0.88
COL1A1-209ENST00000495677 NPHP3Q7Z494 1330 aa20.53■□□□□ 0.88
COL1A1-209ENST00000495677 ITGAEP38570 1179 aa20.5■□□□□ 0.87
COL1A1-209ENST00000495677 GJD4Q96KN9 370 aaPredicted RBP20.5■□□□□ 0.87
COL1A1-209ENST00000495677 CDC42BPGQ6DT37 1551 aa20.5■□□□□ 0.87
COL1A1-209ENST00000495677 PXDNQ92626 1479 aa20.5■□□□□ 0.87
COL1A1-209ENST00000495677 BRWD3Q6RI45 1802 aa20.47■□□□□ 0.87
COL1A1-209ENST00000495677 ESCO1Q5FWF5 840 aa20.46■□□□□ 0.87
COL1A1-209ENST00000495677 LRPPRCP42704 1394 aaKnown RBP20.46■□□□□ 0.87
COL1A1-209ENST00000495677 FOXO3O43524 673 aa20.43■□□□□ 0.86
COL1A1-209ENST00000495677 SLIT2O94813 1529 aa20.43■□□□□ 0.86
COL1A1-209ENST00000495677 GLI3P10071 1580 aa20.42■□□□□ 0.86
COL1A1-209ENST00000495677 UNC5CLQ8IV45 518 aa20.42■□□□□ 0.86
COL1A1-209ENST00000495677 BLMP54132 1417 aaPredicted RBP20.42■□□□□ 0.86
COL1A1-209ENST00000495677 NAIPQ13075 1403 aa20.42■□□□□ 0.86
COL1A1-209ENST00000495677 TECPR2O15040 1411 aa20.4■□□□□ 0.86
COL1A1-209ENST00000495677 KNDC1Q76NI1 1749 aa20.39■□□□□ 0.86
COL1A1-209ENST00000495677 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
COL1A1-209ENST00000495677 RALGAPBQ86X10 1494 aa20.38■□□□□ 0.85
COL1A1-209ENST00000495677 FMN2Q9NZ56 1722 aa20.38■□□□□ 0.85
COL1A1-209ENST00000495677 NWD2Q9ULI1 1742 aa20.38■□□□□ 0.85
COL1A1-209ENST00000495677 RGPD8O14715 1765 aaPredicted RBP20.37■□□□□ 0.85
COL1A1-209ENST00000495677 SPATA31A3Q5VYP0 1347 aa20.37■□□□□ 0.85
COL1A1-209ENST00000495677 IFT172Q9UG01 1749 aa20.36■□□□□ 0.85
COL1A1-209ENST00000495677 USP32Q8NFA0 1604 aa20.36■□□□□ 0.85
COL1A1-209ENST00000495677 ONECUT3O60422 494 aaPredicted RBP20.36■□□□□ 0.85
COL1A1-209ENST00000495677 ABCC11Q96J66 1382 aa20.35■□□□□ 0.85
COL1A1-209ENST00000495677 LRP5O75197 1615 aa20.35■□□□□ 0.85
COL1A1-209ENST00000495677 XPCQ01831 940 aaPredicted RBP20.35■□□□□ 0.85
COL1A1-209ENST00000495677 RRBP1Q9P2E9 1410 aaKnown RBP20.34■□□□□ 0.85
COL1A1-209ENST00000495677 WAPLQ7Z5K2 1190 aa20.33■□□□□ 0.85
COL1A1-209ENST00000495677 CCDC144AA2RUR9 1427 aa20.33■□□□□ 0.84
COL1A1-209ENST00000495677 SIRT1Q96EB6 747 aa20.32■□□□□ 0.84
COL1A1-209ENST00000495677 SLC4A1APQ9BWU0 796 aaKnown RBP20.32■□□□□ 0.84
COL1A1-209ENST00000495677 ADGRF5Q8IZF2 1346 aa20.31■□□□□ 0.84
COL1A1-209ENST00000495677 SF3B2Q13435 895 aaKnown RBP20.31■□□□□ 0.84
COL1A1-209ENST00000495677 VPS72Q15906 364 aa20.31■□□□□ 0.84
COL1A1-209ENST00000495677 PLCH1Q4KWH8 1693 aa20.31■□□□□ 0.84
COL1A1-209ENST00000495677 KRT28Q7Z3Y7 464 aa20.3■□□□□ 0.84
COL1A1-209ENST00000495677 DEFB132Q7Z7B7 95 aa20.3■□□□□ 0.84
COL1A1-209ENST00000495677 SEPT12Q8IYM1 358 aa20.3■□□□□ 0.84
COL1A1-209ENST00000495677 NUTM2FA1L443 756 aa20.29■□□□□ 0.84
COL1A1-209ENST00000495677 ANKRD30BQ9BXX2 1392 aa20.29■□□□□ 0.84
COL1A1-209ENST00000495677 ABCA3Q99758 1704 aa20.28■□□□□ 0.84
COL1A1-209ENST00000495677 PSME1Q06323 249 aa20.27■□□□□ 0.84
COL1A1-209ENST00000495677 STK26Q9P289 416 aa20.27■□□□□ 0.84
COL1A1-209ENST00000495677 SPATA31E1Q6ZUB1 1445 aa20.27■□□□□ 0.83
COL1A1-209ENST00000495677 PLEKHH1Q9ULM0 1364 aa20.26■□□□□ 0.83
COL1A1-209ENST00000495677 TNS3Q68CZ2 1445 aa20.26■□□□□ 0.83
COL1A1-209ENST00000495677 KRT27Q7Z3Y8 459 aa20.25■□□□□ 0.83
COL1A1-209ENST00000495677 PPARGC1BQ86YN6 1023 aaKnown RBP20.25■□□□□ 0.83
COL1A1-209ENST00000495677 SBNO1A3KN83 1393 aa20.24■□□□□ 0.83
COL1A1-209ENST00000495677 PIK3C2GO75747 1445 aa20.24■□□□□ 0.83
COL1A1-209ENST00000495677 YTHDC2Q9H6S0 1430 aaKnown RBP20.24■□□□□ 0.83
COL1A1-209ENST00000495677 TMEM132EQ6IEE7 984 aa20.23■□□□□ 0.83
COL1A1-209ENST00000495677 PHF8Q9UPP1 1060 aa20.23■□□□□ 0.83
COL1A1-209ENST00000495677 NRXN1Q9ULB1 1477 aa20.22■□□□□ 0.83
COL1A1-209ENST00000495677 HAP1P54257 671 aaPredicted RBP20.21■□□□□ 0.83
COL1A1-209ENST00000495677 RGL3Q3MIN7 710 aa20.21■□□□□ 0.83
COL1A1-209ENST00000495677 NRAPQ86VF7 1730 aa20.21■□□□□ 0.83
COL1A1-209ENST00000495677 ARHGEF10O15013 1369 aa20.21■□□□□ 0.83
COL1A1-209ENST00000495677 RGPD1P0DJD0 1748 aa20.2■□□□□ 0.82
COL1A1-209ENST00000495677 BAG6P46379 1132 aa20.2■□□□□ 0.82
COL1A1-209ENST00000495677 FAM83GA6ND36 823 aa20.19■□□□□ 0.82
COL1A1-209ENST00000495677 CABLES1Q8TDN4 633 aa20.19■□□□□ 0.82
COL1A1-209ENST00000495677 HRCP23327 699 aa20.18■□□□□ 0.82
COL1A1-209ENST00000495677 C14orf93Q9H972 538 aaKnown RBP20.18■□□□□ 0.82
COL1A1-209ENST00000495677 CCDC9Q9Y3X0 531 aaKnown RBP20.17■□□□□ 0.82
COL1A1-209ENST00000495677 TRPM3Q9HCF6 1732 aaPredicted RBP20.16■□□□□ 0.82
COL1A1-209ENST00000495677 COL14A1Q05707 1796 aaKnown RBP20.16■□□□□ 0.82
COL1A1-209ENST00000495677 DHX57Q6P158 1386 aaKnown RBP20.15■□□□□ 0.82
COL1A1-209ENST00000495677 ALS2Q96Q42 1657 aa20.15■□□□□ 0.82
COL1A1-209ENST00000495677 ANKARQ7Z5J8 1434 aa20.13■□□□□ 0.81
COL1A1-209ENST00000495677 DISP2A7MBM2 1401 aa20.12■□□□□ 0.81
COL1A1-209ENST00000495677 MPHOSPH9Q99550 1183 aa20.12■□□□□ 0.81
COL1A1-209ENST00000495677 TNS1Q9HBL0 1735 aaKnown RBP20.11■□□□□ 0.81
COL1A1-209ENST00000495677 PSDA5PKW4 1024 aaPredicted RBP20.11■□□□□ 0.81
COL1A1-209ENST00000495677 ADGRB2O60241 1585 aa20.11■□□□□ 0.81
COL1A1-209ENST00000495677 DLC1Q96QB1 1528 aa20.11■□□□□ 0.81
COL1A1-209ENST00000495677 CRYBG1Q9Y4K1 1723 aa20.1■□□□□ 0.81
COL1A1-209ENST00000495677 FAM98CQ17RN3 349 aaKnown RBP20.1■□□□□ 0.81
COL1A1-209ENST00000495677 LMOD2Q6P5Q4 547 aa20.1■□□□□ 0.81
COL1A1-209ENST00000495677 BTG4Q9NY30 223 aa20.1■□□□□ 0.81
COL1A1-209ENST00000495677 EN1Q05925 392 aaPredicted RBP20.09■□□□□ 0.81
COL1A1-209ENST00000495677 THSD7AQ9UPZ6 1657 aa20.09■□□□□ 0.81
COL1A1-209ENST00000495677 CFAP70Q5T0N1 1121 aa20.08■□□□□ 0.81
COL1A1-209ENST00000495677 PRAM1Q96QH2 718 aa20.08■□□□□ 0.81
COL1A1-209ENST00000495677 SPATA31A5Q5VU36 1347 aa20.07■□□□□ 0.8
COL1A1-209ENST00000495677 SPATA31A7Q8IWB4 1347 aa20.07■□□□□ 0.8
COL1A1-209ENST00000495677 PMFBP1Q8TBY8 1022 aa20.07■□□□□ 0.8
COL1A1-209ENST00000495677 ACIN1Q9UKV3 1341 aaKnown RBP20.06■□□□□ 0.8
COL1A1-209ENST00000495677 A0A0G2JS52 829 aa20.06■□□□□ 0.8
COL1A1-209ENST00000495677 MYT1Q01538 1121 aa20.06■□□□□ 0.8
COL1A1-209ENST00000495677 PLEKHG5O94827 1062 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms