RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 NPHP3Q7Z494 1330 aa26.4■■□□□ 1.82
TMEM53-209ENST00000495630 ATAD2Q6PL18 1390 aa26.39■■□□□ 1.82
TMEM53-209ENST00000495630 FOXO3O43524 673 aa26.36■■□□□ 1.81
TMEM53-209ENST00000495630 ADGRF5Q8IZF2 1346 aa26.34■■□□□ 1.81
TMEM53-209ENST00000495630 LRPPRCP42704 1394 aaKnown RBP26.33■■□□□ 1.81
TMEM53-209ENST00000495630 ATRNO75882 1429 aa26.33■■□□□ 1.81
TMEM53-209ENST00000495630 FOXD1Q16676 465 aa26.32■■□□□ 1.8
TMEM53-209ENST00000495630 WAPLQ7Z5K2 1190 aa26.32■■□□□ 1.8
TMEM53-209ENST00000495630 STK26Q9P289 416 aa26.32■■□□□ 1.8
TMEM53-209ENST00000495630 RGL3Q3MIN7 710 aa26.31■■□□□ 1.8
TMEM53-209ENST00000495630 MYOM2P54296 1465 aa26.3■■□□□ 1.8
TMEM53-209ENST00000495630 CCDC125Q86Z20 511 aa26.3■■□□□ 1.8
TMEM53-209ENST00000495630 XPCQ01831 940 aaPredicted RBP26.29■■□□□ 1.8
TMEM53-209ENST00000495630 ABCC11Q96J66 1382 aa26.29■■□□□ 1.8
TMEM53-209ENST00000495630 ANKRD30BQ9BXX2 1392 aa26.29■■□□□ 1.8
TMEM53-209ENST00000495630 COL22A1Q8NFW1 1626 aaPredicted RBP26.28■■□□□ 1.8
TMEM53-209ENST00000495630 PPLO60437 1756 aa26.28■■□□□ 1.8
TMEM53-209ENST00000495630 GJD4Q96KN9 370 aaPredicted RBP26.28■■□□□ 1.8
TMEM53-209ENST00000495630 CDC42BPGQ6DT37 1551 aa26.28■■□□□ 1.8
TMEM53-209ENST00000495630 BCL9LQ86UU0 1499 aa26.27■■□□□ 1.8
TMEM53-209ENST00000495630 PXDNQ92626 1479 aa26.27■■□□□ 1.8
TMEM53-209ENST00000495630 CCDC144AA2RUR9 1427 aa26.26■■□□□ 1.79
TMEM53-209ENST00000495630 TECPR2O15040 1411 aa26.26■■□□□ 1.79
TMEM53-209ENST00000495630 NUTM2FA1L443 756 aa26.26■■□□□ 1.79
TMEM53-209ENST00000495630 TMEM132EQ6IEE7 984 aa26.25■■□□□ 1.79
TMEM53-209ENST00000495630 ZRANB1Q9UGI0 708 aa26.25■■□□□ 1.79
TMEM53-209ENST00000495630 SIRT1Q96EB6 747 aa26.24■■□□□ 1.79
TMEM53-209ENST00000495630 MPHOSPH9Q99550 1183 aa26.24■■□□□ 1.79
TMEM53-209ENST00000495630 SPATA31E1Q6ZUB1 1445 aa26.22■■□□□ 1.79
TMEM53-209ENST00000495630 SPATA31A3Q5VYP0 1347 aa26.21■■□□□ 1.79
TMEM53-209ENST00000495630 UNC5CLQ8IV45 518 aa26.21■■□□□ 1.79
TMEM53-209ENST00000495630 KRT28Q7Z3Y7 464 aa26.2■■□□□ 1.78
TMEM53-209ENST00000495630 PLEKHH1Q9ULM0 1364 aa26.19■■□□□ 1.78
TMEM53-209ENST00000495630 SRCAPQ6ZRS2 3230 aa26.18■■□□□ 1.78
TMEM53-209ENST00000495630 C14orf93Q9H972 538 aaKnown RBP26.16■■□□□ 1.78
TMEM53-209ENST00000495630 YTHDC2Q9H6S0 1430 aaKnown RBP26.15■■□□□ 1.78
TMEM53-209ENST00000495630 PSME1Q06323 249 aa26.15■■□□□ 1.78
TMEM53-209ENST00000495630 PIK3C2GO75747 1445 aa26.14■■□□□ 1.78
TMEM53-209ENST00000495630 ACIN1Q9UKV3 1341 aaKnown RBP26.14■■□□□ 1.77
TMEM53-209ENST00000495630 PHF8Q9UPP1 1060 aa26.13■■□□□ 1.77
TMEM53-209ENST00000495630 SLIT2O94813 1529 aa26.12■■□□□ 1.77
TMEM53-209ENST00000495630 EP400Q96L91 3159 aa26.1■■□□□ 1.77
TMEM53-209ENST00000495630 DHX57Q6P158 1386 aaKnown RBP26.09■■□□□ 1.77
TMEM53-209ENST00000495630 MARF1Q9Y4F3 1742 aaKnown RBP26.09■■□□□ 1.77
TMEM53-209ENST00000495630 HAP1P54257 671 aaPredicted RBP26.09■■□□□ 1.77
TMEM53-209ENST00000495630 RALGAPBQ86X10 1494 aa26.09■■□□□ 1.77
TMEM53-209ENST00000495630 VPS72Q15906 364 aa26.07■■□□□ 1.76
TMEM53-209ENST00000495630 CFAP70Q5T0N1 1121 aa26.07■■□□□ 1.76
TMEM53-209ENST00000495630 KNDC1Q76NI1 1749 aa26.06■■□□□ 1.76
TMEM53-209ENST00000495630 ONECUT3O60422 494 aaPredicted RBP26.06■■□□□ 1.76
TMEM53-209ENST00000495630 BLMP54132 1417 aaPredicted RBP26.05■■□□□ 1.76
TMEM53-209ENST00000495630 FMN2Q9NZ56 1722 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 SEPT12Q8IYM1 358 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 CABLES1Q8TDN4 633 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 KIF1AQ12756 1690 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 SBNO1A3KN83 1393 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 IFT172Q9UG01 1749 aa26.05■■□□□ 1.76
TMEM53-209ENST00000495630 PRAM1Q96QH2 718 aa26.04■■□□□ 1.76
TMEM53-209ENST00000495630 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.04■■□□□ 1.76
TMEM53-209ENST00000495630 TNS3Q68CZ2 1445 aa26.04■■□□□ 1.76
TMEM53-209ENST00000495630 SF3B2Q13435 895 aaKnown RBP26.02■■□□□ 1.76
TMEM53-209ENST00000495630 LMOD2Q6P5Q4 547 aa26.02■■□□□ 1.76
TMEM53-209ENST00000495630 GLI3P10071 1580 aa26.02■■□□□ 1.76
TMEM53-209ENST00000495630 ARHGEF10O15013 1369 aa26.01■■□□□ 1.75
TMEM53-209ENST00000495630 SAFB2Q14151 953 aaKnown RBP eCLIP26.01■■□□□ 1.75
TMEM53-209ENST00000495630 NRXN1Q9ULB1 1477 aa26■■□□□ 1.75
TMEM53-209ENST00000495630 POGKQ9P215 609 aa26■■□□□ 1.75
TMEM53-209ENST00000495630 CCDC9Q9Y3X0 531 aaKnown RBP26■■□□□ 1.75
TMEM53-209ENST00000495630 FAM83GA6ND36 823 aa25.99■■□□□ 1.75
TMEM53-209ENST00000495630 USP32Q8NFA0 1604 aa25.99■■□□□ 1.75
TMEM53-209ENST00000495630 PLEKHG5O94827 1062 aa25.98■■□□□ 1.75
TMEM53-209ENST00000495630 DEFB132Q7Z7B7 95 aa25.98■■□□□ 1.75
TMEM53-209ENST00000495630 KRT27Q7Z3Y8 459 aa25.97■■□□□ 1.75
TMEM53-209ENST00000495630 PMFBP1Q8TBY8 1022 aa25.97■■□□□ 1.75
TMEM53-209ENST00000495630 ANKARQ7Z5J8 1434 aa25.95■■□□□ 1.74
TMEM53-209ENST00000495630 RGPD8O14715 1765 aaPredicted RBP25.91■■□□□ 1.74
TMEM53-209ENST00000495630 DLC1Q96QB1 1528 aa25.9■■□□□ 1.74
TMEM53-209ENST00000495630 TRAK1Q9UPV9 953 aa25.9■■□□□ 1.74
TMEM53-209ENST00000495630 GPRASP1Q5JY77 1395 aa25.89■■□□□ 1.74
TMEM53-209ENST00000495630 BTG4Q9NY30 223 aa25.88■■□□□ 1.73
TMEM53-209ENST00000495630 NWD2Q9ULI1 1742 aa25.88■■□□□ 1.73
TMEM53-209ENST00000495630 BRWD3Q6RI45 1802 aa25.87■■□□□ 1.73
TMEM53-209ENST00000495630 HIRIP3Q9BW71 556 aaPredicted RBP25.87■■□□□ 1.73
TMEM53-209ENST00000495630 EIF3AQ14152 1382 aaKnown RBP25.86■■□□□ 1.73
TMEM53-209ENST00000495630 A0A0G2JS52 829 aa25.86■■□□□ 1.73
TMEM53-209ENST00000495630 MYT1Q01538 1121 aa25.86■■□□□ 1.73
TMEM53-209ENST00000495630 FAM98CQ17RN3 349 aaKnown RBP25.86■■□□□ 1.73
TMEM53-209ENST00000495630 STAC3Q96MF2 364 aa25.86■■□□□ 1.73
TMEM53-209ENST00000495630 WASLO00401 505 aaPredicted RBP25.85■■□□□ 1.73
TMEM53-209ENST00000495630 BAG6P46379 1132 aa25.85■■□□□ 1.73
TMEM53-209ENST00000495630 MINK1Q8N4C8 1332 aaPredicted RBP25.85■■□□□ 1.73
TMEM53-209ENST00000495630 KDM2AQ9Y2K7 1162 aa25.83■■□□□ 1.73
TMEM53-209ENST00000495630 PRR36Q9H6K5 1346 aa25.83■■□□□ 1.73
TMEM53-209ENST00000495630 NGDNQ8NEJ9 315 aaKnown RBP25.82■■□□□ 1.72
TMEM53-209ENST00000495630 PLCH1Q4KWH8 1693 aa25.82■■□□□ 1.72
TMEM53-209ENST00000495630 DCAF11Q8TEB1 546 aa25.81■■□□□ 1.72
TMEM53-209ENST00000495630 ADGRB1O14514 1584 aa25.81■■□□□ 1.72
TMEM53-209ENST00000495630 ADGRB2O60241 1585 aa25.81■■□□□ 1.72
TMEM53-209ENST00000495630 SPATA31A5Q5VU36 1347 aa25.8■■□□□ 1.72
TMEM53-209ENST00000495630 SPATA31A7Q8IWB4 1347 aa25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms