RNA–Protein interactions for RNA: ENST00000495581.1

SMIM29-208, Transcript of small integral membrane protein 29, humanhuman

TSL 2

Gene SMIM29, Length 911 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM29-208ENST00000495581 PRAM1Q96QH2 718 aa30.06■■■□□ 2.4
SMIM29-208ENST00000495581 ROBO1Q9Y6N7 1651 aa30.05■■■□□ 2.4
SMIM29-208ENST00000495581 MST1RQ04912 1400 aa30.04■■■□□ 2.4
SMIM29-208ENST00000495581 NBPF1Q3BBV0 1214 aa30.01■■■□□ 2.39
SMIM29-208ENST00000495581 CDC42BPGQ6DT37 1551 aa30■■■□□ 2.39
SMIM29-208ENST00000495581 SAFB2Q14151 953 aaKnown RBP eCLIP30■■■□□ 2.39
SMIM29-208ENST00000495581 BRINP3Q76B58 766 aa29.98■■■□□ 2.39
SMIM29-208ENST00000495581 C1orf167Q5SNV9 1468 aa29.97■■■□□ 2.39
SMIM29-208ENST00000495581 CCER1Q8TC90 406 aaPredicted RBP29.96■■■□□ 2.39
SMIM29-208ENST00000495581 ROCK2O75116 1388 aaKnown RBP29.92■■■□□ 2.38
SMIM29-208ENST00000495581 NBPF8Q3BBV2 869 aa29.92■■■□□ 2.38
SMIM29-208ENST00000495581 TIMELESSQ9UNS1 1208 aa29.91■■■□□ 2.38
SMIM29-208ENST00000495581 TRPM1Q7Z4N2 1603 aa29.91■■■□□ 2.38
SMIM29-208ENST00000495581 ARHGEF28Q8N1W1 1705 aaKnown RBP29.89■■■□□ 2.38
SMIM29-208ENST00000495581 MINK1Q8N4C8 1332 aaPredicted RBP29.89■■■□□ 2.38
SMIM29-208ENST00000495581 ORAI2Q96SN7 254 aa29.88■■■□□ 2.37
SMIM29-208ENST00000495581 PHLPP1O60346 1717 aa29.88■■■□□ 2.37
SMIM29-208ENST00000495581 AHDC1Q5TGY3 1603 aaPredicted RBP29.87■■■□□ 2.37
SMIM29-208ENST00000495581 NUTM2FA1L443 756 aa29.87■■■□□ 2.37
SMIM29-208ENST00000495581 ESCO1Q5FWF5 840 aa29.87■■■□□ 2.37
SMIM29-208ENST00000495581 HIRIP3Q9BW71 556 aaPredicted RBP29.86■■■□□ 2.37
SMIM29-208ENST00000495581 ADGRB2O60241 1585 aa29.85■■■□□ 2.37
SMIM29-208ENST00000495581 EIF3AQ14152 1382 aaKnown RBP29.84■■■□□ 2.37
SMIM29-208ENST00000495581 FMN2Q9NZ56 1722 aa29.84■■■□□ 2.37
SMIM29-208ENST00000495581 CENPJQ9HC77 1338 aaPredicted RBP29.83■■■□□ 2.37
SMIM29-208ENST00000495581 GPRASP1Q5JY77 1395 aa29.82■■■□□ 2.36
SMIM29-208ENST00000495581 WASLO00401 505 aaPredicted RBP29.82■■■□□ 2.36
SMIM29-208ENST00000495581 RALGAPBQ86X10 1494 aa29.8■■■□□ 2.36
SMIM29-208ENST00000495581 CARD11Q9BXL7 1154 aa29.8■■■□□ 2.36
SMIM29-208ENST00000495581 JCADQ9P266 1359 aa29.79■■■□□ 2.36
SMIM29-208ENST00000495581 COL16A1Q07092 1604 aaPredicted RBP29.79■■■□□ 2.36
SMIM29-208ENST00000495581 ANKARQ7Z5J8 1434 aa29.79■■■□□ 2.36
SMIM29-208ENST00000495581 NHSL1Q5SYE7 1610 aa29.78■■■□□ 2.36
SMIM29-208ENST00000495581 NPHP3Q7Z494 1330 aa29.77■■■□□ 2.36
SMIM29-208ENST00000495581 LRRC59Q96AG4 307 aaKnown RBP29.77■■■□□ 2.36
SMIM29-208ENST00000495581 DDX17Q92841 729 aaKnown RBP29.76■■■□□ 2.35
SMIM29-208ENST00000495581 PHF8Q9UPP1 1060 aa29.74■■■□□ 2.35
SMIM29-208ENST00000495581 TULP4Q9NRJ4 1543 aa29.73■■■□□ 2.35
SMIM29-208ENST00000495581 FOXO3O43524 673 aa29.73■■■□□ 2.35
SMIM29-208ENST00000495581 CDK19Q9BWU1 502 aa29.73■■■□□ 2.35
SMIM29-208ENST00000495581 SOS2Q07890 1332 aaPredicted RBP29.72■■■□□ 2.35
SMIM29-208ENST00000495581 KIF1AQ12756 1690 aa29.71■■■□□ 2.35
SMIM29-208ENST00000495581 NUDT16Q96DE0 195 aaKnown RBP29.68■■■□□ 2.34
SMIM29-208ENST00000495581 QRICH2Q9H0J4 1663 aa29.68■■■□□ 2.34
SMIM29-208ENST00000495581 PRR36Q9H6K5 1346 aa29.68■■■□□ 2.34
SMIM29-208ENST00000495581 SPATA31A6Q5VVP1 1343 aa29.67■■■□□ 2.34
SMIM29-208ENST00000495581 USP32Q8NFA0 1604 aa29.67■■■□□ 2.34
SMIM29-208ENST00000495581 RGPD8O14715 1765 aaPredicted RBP29.67■■■□□ 2.34
SMIM29-208ENST00000495581 DISP3Q9P2K9 1392 aa29.65■■■□□ 2.34
SMIM29-208ENST00000495581 MED1Q15648 1581 aaPredicted RBP29.65■■■□□ 2.34
SMIM29-208ENST00000495581 SRPK2P78362 688 aaKnown RBP29.65■■■□□ 2.34
SMIM29-208ENST00000495581 EVC2Q86UK5 1308 aa29.65■■■□□ 2.34
SMIM29-208ENST00000495581 PSME1Q06323 249 aa29.64■■■□□ 2.34
SMIM29-208ENST00000495581 PMFBP1Q8TBY8 1022 aa29.64■■■□□ 2.34
SMIM29-208ENST00000495581 SHPRHQ149N8 1683 aa29.63■■■□□ 2.33
SMIM29-208ENST00000495581 PXDNQ92626 1479 aa29.63■■■□□ 2.33
SMIM29-208ENST00000495581 XPCQ01831 940 aaPredicted RBP29.63■■■□□ 2.33
SMIM29-208ENST00000495581 KRT28Q7Z3Y7 464 aa29.63■■■□□ 2.33
SMIM29-208ENST00000495581 CCDC61Q9Y6R9 512 aa29.63■■■□□ 2.33
SMIM29-208ENST00000495581 ATP7BP35670 1465 aa29.62■■■□□ 2.33
SMIM29-208ENST00000495581 NGDNQ8NEJ9 315 aaKnown RBP29.6■■■□□ 2.33
SMIM29-208ENST00000495581 PNPLA6Q8IY17 1366 aa29.6■■■□□ 2.33
SMIM29-208ENST00000495581 SBNO2Q9Y2G9 1366 aa29.6■■■□□ 2.33
SMIM29-208ENST00000495581 CABP2Q9NPB3 220 aa29.59■■■□□ 2.33
SMIM29-208ENST00000495581 ITSN1Q15811 1721 aa29.58■■■□□ 2.33
SMIM29-208ENST00000495581 PHF23Q9BUL5 403 aaPredicted RBP29.58■■■□□ 2.33
SMIM29-208ENST00000495581 SLC24A1O60721 1099 aa29.56■■■□□ 2.32
SMIM29-208ENST00000495581 SBNO1A3KN83 1393 aa29.54■■■□□ 2.32
SMIM29-208ENST00000495581 SPATA31A3Q5VYP0 1347 aa29.54■■■□□ 2.32
SMIM29-208ENST00000495581 PLEKHG3A1L390 1219 aa29.54■■■□□ 2.32
SMIM29-208ENST00000495581 NUTM2BA6NNL0 878 aaPredicted RBP29.54■■■□□ 2.32
SMIM29-208ENST00000495581 NUTM2EB1AL46 878 aaPredicted RBP29.54■■■□□ 2.32
SMIM29-208ENST00000495581 NUTM2AQ8IVF1 878 aaPredicted RBP29.54■■■□□ 2.32
SMIM29-208ENST00000495581 MEX3CQ5U5Q3 659 aaKnown RBP29.53■■■□□ 2.32
SMIM29-208ENST00000495581 ST20-MTHFSA0A0A6YYL1 179 aa29.52■■■□□ 2.32
SMIM29-208ENST00000495581 USP47Q96K76 1375 aa29.51■■■□□ 2.31
SMIM29-208ENST00000495581 PPIP5K1Q6PFW1 1433 aa29.5■■■□□ 2.31
SMIM29-208ENST00000495581 TOPAZ1Q8N9V7 1692 aa29.5■■■□□ 2.31
SMIM29-208ENST00000495581 TNS3Q68CZ2 1445 aa29.49■■■□□ 2.31
SMIM29-208ENST00000495581 POLR3AO14802 1390 aaPredicted RBP29.49■■■□□ 2.31
SMIM29-208ENST00000495581 ACEP12821 1306 aa29.48■■■□□ 2.31
SMIM29-208ENST00000495581 LRP6O75581 1613 aa29.48■■■□□ 2.31
SMIM29-208ENST00000495581 ATAD2Q6PL18 1390 aa29.48■■■□□ 2.31
SMIM29-208ENST00000495581 LMOD2Q6P5Q4 547 aa29.47■■■□□ 2.31
SMIM29-208ENST00000495581 ARHGEF10O15013 1369 aa29.47■■■□□ 2.31
SMIM29-208ENST00000495581 COL22A1Q8NFW1 1626 aaPredicted RBP29.46■■■□□ 2.31
SMIM29-208ENST00000495581 CABP1Q9NZU7 370 aa29.46■■■□□ 2.31
SMIM29-208ENST00000495581 TESK2Q96S53 571 aa29.45■■■□□ 2.31
SMIM29-208ENST00000495581 PAK3O75914 559 aaPredicted RBP29.44■■■□□ 2.3
SMIM29-208ENST00000495581 PUS7Q96PZ0 661 aaKnown RBP29.44■■■□□ 2.3
SMIM29-208ENST00000495581 ADAMTS2O95450 1211 aa29.4■■■□□ 2.3
SMIM29-208ENST00000495581 TRPM3Q9HCF6 1732 aaPredicted RBP29.4■■■□□ 2.3
SMIM29-208ENST00000495581 TMF1P82094 1093 aa29.38■■■□□ 2.29
SMIM29-208ENST00000495581 BRD4O60885 1362 aaPredicted RBP29.38■■■□□ 2.29
SMIM29-208ENST00000495581 HAP1P54257 671 aaPredicted RBP29.37■■■□□ 2.29
SMIM29-208ENST00000495581 ILDR2Q71H61 639 aa29.37■■■□□ 2.29
SMIM29-208ENST00000495581 ZNF692Q9BU19 519 aaPredicted RBP29.37■■■□□ 2.29
SMIM29-208ENST00000495581 C8orf37Q96NL8 207 aa29.36■■■□□ 2.29
SMIM29-208ENST00000495581 RGS17Q9UGC6 210 aaPredicted RBP29.36■■■□□ 2.29
SMIM29-208ENST00000495581 EIF4G2P78344 907 aaKnown RBP eCLIP29.34■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms