RNA–Protein interactions for RNA: ENST00000495553.1

ACTN4-207, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-207ENST00000495553 EIF4G2P78344 907 aaKnown RBP eCLIP13.34□□□□□ -0.27
ACTN4-207ENST00000495553 SAFB2Q14151 953 aaKnown RBP eCLIP13.34□□□□□ -0.272e-6■■□□□ 14.4
ACTN4-207ENST00000495553 TRPM1Q7Z4N2 1603 aa13.34□□□□□ -0.27
ACTN4-207ENST00000495553 FAM135BQ49AJ0 1406 aa13.33□□□□□ -0.28
ACTN4-207ENST00000495553 PLEKHH1Q9ULM0 1364 aa13.32□□□□□ -0.28
ACTN4-207ENST00000495553 DCCP43146 1447 aa13.32□□□□□ -0.28
ACTN4-207ENST00000495553 ADGRB1O14514 1584 aa13.32□□□□□ -0.28
ACTN4-207ENST00000495553 GPRASP1Q5JY77 1395 aa13.32□□□□□ -0.28
ACTN4-207ENST00000495553 SLC24A1O60721 1099 aa13.31□□□□□ -0.28
ACTN4-207ENST00000495553 USP47Q96K76 1375 aa13.3□□□□□ -0.28
ACTN4-207ENST00000495553 DLC1Q96QB1 1528 aa13.29□□□□□ -0.28
ACTN4-207ENST00000495553 XIRP1Q702N8 1843 aaKnown RBP13.28□□□□□ -0.28
ACTN4-207ENST00000495553 HSPA1LP34931 641 aa13.28□□□□□ -0.28
ACTN4-207ENST00000495553 MINK1Q8N4C8 1332 aaPredicted RBP13.28□□□□□ -0.28
ACTN4-207ENST00000495553 NUTM2FA1L443 756 aa13.27□□□□□ -0.29
ACTN4-207ENST00000495553 HIRIP3Q9BW71 556 aaPredicted RBP13.27□□□□□ -0.29
ACTN4-207ENST00000495553 MST1RQ04912 1400 aa13.26□□□□□ -0.29
ACTN4-207ENST00000495553 BRINP3Q76B58 766 aa13.26□□□□□ -0.29
ACTN4-207ENST00000495553 CENPJQ9HC77 1338 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-207ENST00000495553 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.26□□□□□ -0.29
ACTN4-207ENST00000495553 KNDC1Q76NI1 1749 aa13.25□□□□□ -0.29
ACTN4-207ENST00000495553 HSPA5P11021 654 aaKnown RBP13.25□□□□□ -0.29
ACTN4-207ENST00000495553 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
ACTN4-207ENST00000495553 C1orf167Q5SNV9 1468 aa13.24□□□□□ -0.29
ACTN4-207ENST00000495553 NALCNQ8IZF0 1738 aa13.23□□□□□ -0.29
ACTN4-207ENST00000495553 ZNF316A6NFI3 1004 aaPredicted RBP13.23□□□□□ -0.29
ACTN4-207ENST00000495553 WASLO00401 505 aaPredicted RBP13.23□□□□□ -0.29
ACTN4-207ENST00000495553 ORAI2Q96SN7 254 aa13.23□□□□□ -0.29
ACTN4-207ENST00000495553 ST20-MTHFSA0A0A6YYL1 179 aa13.22□□□□□ -0.29
ACTN4-207ENST00000495553 CDCA8Q53HL2 280 aa13.22□□□□□ -0.29
ACTN4-207ENST00000495553 CDC42BPGQ6DT37 1551 aa13.22□□□□□ -0.29
ACTN4-207ENST00000495553 TMF1P82094 1093 aa13.21□□□□□ -0.29
ACTN4-207ENST00000495553 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
ACTN4-207ENST00000495553 ROBO1Q9Y6N7 1651 aa13.19□□□□□ -0.3
ACTN4-207ENST00000495553 SRPK2P78362 688 aaKnown RBP13.19□□□□□ -0.3
ACTN4-207ENST00000495553 DDX17Q92841 729 aaKnown RBP13.19□□□□□ -0.3
ACTN4-207ENST00000495553 NPHP3Q7Z494 1330 aa13.18□□□□□ -0.3
ACTN4-207ENST00000495553 FOXO3O43524 673 aa13.18□□□□□ -0.3
ACTN4-207ENST00000495553 PHF8Q9UPP1 1060 aa13.18□□□□□ -0.3
ACTN4-207ENST00000495553 SBNO2Q9Y2G9 1366 aa13.18□□□□□ -0.3
ACTN4-207ENST00000495553 EVC2Q86UK5 1308 aa13.17□□□□□ -0.3
ACTN4-207ENST00000495553 ANKARQ7Z5J8 1434 aa13.17□□□□□ -0.3
ACTN4-207ENST00000495553 NUDT16Q96DE0 195 aaKnown RBP13.17□□□□□ -0.3
ACTN4-207ENST00000495553 ARHGEF28Q8N1W1 1705 aaKnown RBP13.16□□□□□ -0.3
ACTN4-207ENST00000495553 PMFBP1Q8TBY8 1022 aa13.16□□□□□ -0.3
ACTN4-207ENST00000495553 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
ACTN4-207ENST00000495553 CABP2Q9NPB3 220 aa13.16□□□□□ -0.3
ACTN4-207ENST00000495553 ADGRB2O60241 1585 aa13.15□□□□□ -0.3
ACTN4-207ENST00000495553 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
ACTN4-207ENST00000495553 PSME1Q06323 249 aa13.15□□□□□ -0.3
ACTN4-207ENST00000495553 NGDNQ8NEJ9 315 aaKnown RBP13.15□□□□□ -0.3
ACTN4-207ENST00000495553 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.3
ACTN4-207ENST00000495553 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.31
ACTN4-207ENST00000495553 XPCQ01831 940 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-207ENST00000495553 POLR3GLQ9BT43 218 aa13.14□□□□□ -0.31
ACTN4-207ENST00000495553 JCADQ9P266 1359 aa13.14□□□□□ -0.31
ACTN4-207ENST00000495553 SOS2Q07890 1332 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-207ENST00000495553 TULP4Q9NRJ4 1543 aa13.13□□□□□ -0.31
ACTN4-207ENST00000495553 AHDC1Q5TGY3 1603 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-207ENST00000495553 KRT28Q7Z3Y7 464 aa13.13□□□□□ -0.31
ACTN4-207ENST00000495553 TESK2Q96S53 571 aa13.13□□□□□ -0.31
ACTN4-207ENST00000495553 FMN2Q9NZ56 1722 aa13.12□□□□□ -0.31
ACTN4-207ENST00000495553 PUS7Q96PZ0 661 aaKnown RBP13.11□□□□□ -0.31
ACTN4-207ENST00000495553 PHLPP1O60346 1717 aa13.1□□□□□ -0.31
ACTN4-207ENST00000495553 PLEKHG3A1L390 1219 aa13.1□□□□□ -0.31
ACTN4-207ENST00000495553 CABP1Q9NZU7 370 aa13.1□□□□□ -0.31
ACTN4-207ENST00000495553 ATP7BP35670 1465 aa13.1□□□□□ -0.31
ACTN4-207ENST00000495553 CCDC7Q96M83 1385 aa13.09□□□□□ -0.31
ACTN4-207ENST00000495553 LMOD2Q6P5Q4 547 aa13.09□□□□□ -0.31
ACTN4-207ENST00000495553 ACEP12821 1306 aa13.09□□□□□ -0.31
ACTN4-207ENST00000495553 KIF7Q2M1P5 1343 aa13.09□□□□□ -0.31
ACTN4-207ENST00000495553 SPATA31A6Q5VVP1 1343 aa13.09□□□□□ -0.31
ACTN4-207ENST00000495553 ATAD2Q6PL18 1390 aa13.08□□□□□ -0.31
ACTN4-207ENST00000495553 PPIP5K1Q6PFW1 1433 aa13.08□□□□□ -0.32
ACTN4-207ENST00000495553 NUTM2BA6NNL0 878 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-207ENST00000495553 NUTM2EB1AL46 878 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-207ENST00000495553 PAK3O75914 559 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-207ENST00000495553 NUTM2AQ8IVF1 878 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-207ENST00000495553 COL16A1Q07092 1604 aaPredicted RBP13.08□□□□□ -0.32
ACTN4-207ENST00000495553 DISP3Q9P2K9 1392 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 MEX3CQ5U5Q3 659 aaKnown RBP13.07□□□□□ -0.32
ACTN4-207ENST00000495553 TMC1Q8TDI8 760 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 PXDNQ92626 1479 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 SPATA31A3Q5VYP0 1347 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 WASHC2AQ641Q2 1341 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 PNPLA6Q8IY17 1366 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 NINLQ9Y2I6 1382 aa13.07□□□□□ -0.32
ACTN4-207ENST00000495553 NHSL1Q5SYE7 1610 aa13.06□□□□□ -0.32
ACTN4-207ENST00000495553 KIF1AQ12756 1690 aa13.06□□□□□ -0.32
ACTN4-207ENST00000495553 PHF23Q9BUL5 403 aaPredicted RBP13.06□□□□□ -0.32
ACTN4-207ENST00000495553 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
ACTN4-207ENST00000495553 USP32Q8NFA0 1604 aa13.06□□□□□ -0.32
ACTN4-207ENST00000495553 POLR3AO14802 1390 aaPredicted RBP13.05□□□□□ -0.32
ACTN4-207ENST00000495553 C11orf95C9JLR9 678 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-207ENST00000495553 PLEKHG5O94827 1062 aa13.04□□□□□ -0.32
ACTN4-207ENST00000495553 HAP1P54257 671 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-207ENST00000495553 ZNF692Q9BU19 519 aaPredicted RBP13.04□□□□□ -0.32
ACTN4-207ENST00000495553 ARHGEF10O15013 1369 aa13.04□□□□□ -0.32
ACTN4-207ENST00000495553 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
ACTN4-207ENST00000495553 ADAMTS2O95450 1211 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms