RNA–Protein interactions for RNA: ENST00000495355.1

YIPF4-204, Transcript of Yip1 domain family member 4, humanhuman

TSL 2

Gene YIPF4, Length 544 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF4-204ENST00000495355 NUTM2AQ8IVF1 878 aaPredicted RBP26.84■■□□□ 1.89
YIPF4-204ENST00000495355 LRRC59Q96AG4 307 aaKnown RBP26.84■■□□□ 1.89
YIPF4-204ENST00000495355 ABCC11Q96J66 1382 aa26.83■■□□□ 1.88
YIPF4-204ENST00000495355 WAPLQ7Z5K2 1190 aa26.82■■□□□ 1.88
YIPF4-204ENST00000495355 SOS2Q07890 1332 aaPredicted RBP26.82■■□□□ 1.88
YIPF4-204ENST00000495355 MYOM2P54296 1465 aa26.81■■□□□ 1.88
YIPF4-204ENST00000495355 STK26Q9P289 416 aa26.81■■□□□ 1.88
YIPF4-204ENST00000495355 YTHDC2Q9H6S0 1430 aaKnown RBP26.8■■□□□ 1.88
YIPF4-204ENST00000495355 ACIN1Q9UKV3 1341 aaKnown RBP26.79■■□□□ 1.88
YIPF4-204ENST00000495355 ZNF772Q68DY9 489 aaPredicted RBP26.78■■□□□ 1.88
YIPF4-204ENST00000495355 C14orf93Q9H972 538 aaKnown RBP26.76■■□□□ 1.87
YIPF4-204ENST00000495355 FMN2Q9NZ56 1722 aa26.76■■□□□ 1.87
YIPF4-204ENST00000495355 PXDNQ92626 1479 aa26.75■■□□□ 1.87
YIPF4-204ENST00000495355 AFF2P51816 1311 aa26.75■■□□□ 1.87
YIPF4-204ENST00000495355 COL22A1Q8NFW1 1626 aaPredicted RBP26.75■■□□□ 1.87
YIPF4-204ENST00000495355 CFAP70Q5T0N1 1121 aa26.73■■□□□ 1.87
YIPF4-204ENST00000495355 ESCO1Q5FWF5 840 aa26.7■■□□□ 1.86
YIPF4-204ENST00000495355 NUTM2FA1L443 756 aa26.69■■□□□ 1.86
YIPF4-204ENST00000495355 ADGRB1O14514 1584 aa26.69■■□□□ 1.86
YIPF4-204ENST00000495355 C8orf37Q96NL8 207 aa26.69■■□□□ 1.86
YIPF4-204ENST00000495355 CDK12Q9NYV4 1490 aaPredicted RBP26.68■■□□□ 1.86
YIPF4-204ENST00000495355 SIRT1Q96EB6 747 aa26.67■■□□□ 1.86
YIPF4-204ENST00000495355 NPHP3Q7Z494 1330 aa26.66■■□□□ 1.86
YIPF4-204ENST00000495355 FOXO3O43524 673 aa26.65■■□□□ 1.86
YIPF4-204ENST00000495355 ADAMTS2O95450 1211 aa26.65■■□□□ 1.86
YIPF4-204ENST00000495355 RXRBP28702 533 aa26.65■■□□□ 1.86
YIPF4-204ENST00000495355 XPCQ01831 940 aaPredicted RBP26.65■■□□□ 1.86
YIPF4-204ENST00000495355 RGPD8O14715 1765 aaPredicted RBP26.65■■□□□ 1.86
YIPF4-204ENST00000495355 DLC1Q96QB1 1528 aa26.64■■□□□ 1.85
YIPF4-204ENST00000495355 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
YIPF4-204ENST00000495355 KIF1AQ12756 1690 aa26.63■■□□□ 1.85
YIPF4-204ENST00000495355 RGS12O14924 1447 aa26.62■■□□□ 1.85
YIPF4-204ENST00000495355 HRCP23327 699 aa26.61■■□□□ 1.85
YIPF4-204ENST00000495355 USP32Q8NFA0 1604 aa26.6■■□□□ 1.85
YIPF4-204ENST00000495355 PRAM1Q96QH2 718 aa26.59■■□□□ 1.85
YIPF4-204ENST00000495355 MARF1Q9Y4F3 1742 aaKnown RBP26.59■■□□□ 1.85
YIPF4-204ENST00000495355 ADGRB2O60241 1585 aa26.58■■□□□ 1.85
YIPF4-204ENST00000495355 UPF1Q92900 1129 aaKnown RBP eCLIP26.58■■□□□ 1.85
YIPF4-204ENST00000495355 QTRT2Q9H974 415 aaKnown RBP26.58■■□□□ 1.85
YIPF4-204ENST00000495355 NGLY1Q96IV0 654 aa26.57■■□□□ 1.84
YIPF4-204ENST00000495355 SAFB2Q14151 953 aaKnown RBP eCLIP26.56■■□□□ 1.84
YIPF4-204ENST00000495355 FNBP4Q8N3X1 1017 aaPredicted RBP26.56■■□□□ 1.84
YIPF4-204ENST00000495355 RBM6P78332 1123 aaKnown RBP26.54■■□□□ 1.84
YIPF4-204ENST00000495355 DCAF11Q8TEB1 546 aa26.53■■□□□ 1.84
YIPF4-204ENST00000495355 SPATA31A3Q5VYP0 1347 aa26.53■■□□□ 1.84
YIPF4-204ENST00000495355 ATRNO75882 1429 aa26.52■■□□□ 1.84
YIPF4-204ENST00000495355 BCL9LQ86UU0 1499 aa26.52■■□□□ 1.84
YIPF4-204ENST00000495355 KDM2AQ9Y2K7 1162 aa26.52■■□□□ 1.84
YIPF4-204ENST00000495355 USP21Q9UK80 565 aa26.51■■□□□ 1.83
YIPF4-204ENST00000495355 PHF8Q9UPP1 1060 aa26.5■■□□□ 1.83
YIPF4-204ENST00000495355 TRAK1Q9UPV9 953 aa26.5■■□□□ 1.83
YIPF4-204ENST00000495355 KRT28Q7Z3Y7 464 aa26.49■■□□□ 1.83
YIPF4-204ENST00000495355 ARHGEF28Q8N1W1 1705 aaKnown RBP26.48■■□□□ 1.83
YIPF4-204ENST00000495355 TNS3Q68CZ2 1445 aa26.48■■□□□ 1.83
YIPF4-204ENST00000495355 ANKARQ7Z5J8 1434 aa26.48■■□□□ 1.83
YIPF4-204ENST00000495355 ABCA3Q99758 1704 aa26.47■■□□□ 1.83
YIPF4-204ENST00000495355 POGKQ9P215 609 aa26.46■■□□□ 1.83
YIPF4-204ENST00000495355 PRR36Q9H6K5 1346 aa26.45■■□□□ 1.83
YIPF4-204ENST00000495355 HIRIP3Q9BW71 556 aaPredicted RBP26.45■■□□□ 1.82
YIPF4-204ENST00000495355 TRPC5Q9UL62 973 aaPredicted RBP26.45■■□□□ 1.82
YIPF4-204ENST00000495355 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.45■■□□□ 1.82
YIPF4-204ENST00000495355 TRPM3Q9HCF6 1732 aaPredicted RBP26.44■■□□□ 1.82
YIPF4-204ENST00000495355 SLIT2O94813 1529 aa26.44■■□□□ 1.82
YIPF4-204ENST00000495355 STAC3Q96MF2 364 aa26.43■■□□□ 1.82
YIPF4-204ENST00000495355 MINK1Q8N4C8 1332 aaPredicted RBP26.42■■□□□ 1.82
YIPF4-204ENST00000495355 TULP4Q9NRJ4 1543 aa26.42■■□□□ 1.82
YIPF4-204ENST00000495355 SBNO1A3KN83 1393 aa26.42■■□□□ 1.82
YIPF4-204ENST00000495355 PMFBP1Q8TBY8 1022 aa26.41■■□□□ 1.82
YIPF4-204ENST00000495355 ALS2Q96Q42 1657 aa26.38■■□□□ 1.81
YIPF4-204ENST00000495355 GLI3P10071 1580 aa26.38■■□□□ 1.81
YIPF4-204ENST00000495355 CABLES1Q8TDN4 633 aa26.38■■□□□ 1.81
YIPF4-204ENST00000495355 KIAA1210Q9ULL0 1709 aa26.37■■□□□ 1.81
YIPF4-204ENST00000495355 WASLO00401 505 aaPredicted RBP26.36■■□□□ 1.81
YIPF4-204ENST00000495355 PLCH1Q4KWH8 1693 aa26.35■■□□□ 1.81
YIPF4-204ENST00000495355 PSME1Q06323 249 aa26.35■■□□□ 1.81
YIPF4-204ENST00000495355 ATP7BP35670 1465 aa26.35■■□□□ 1.81
YIPF4-204ENST00000495355 EP400Q96L91 3159 aa26.33■■□□□ 1.81
YIPF4-204ENST00000495355 RALGAPBQ86X10 1494 aa26.33■■□□□ 1.81
YIPF4-204ENST00000495355 CRYBG1Q9Y4K1 1723 aa26.33■■□□□ 1.81
YIPF4-204ENST00000495355 ARHGEF10O15013 1369 aa26.33■■□□□ 1.8
YIPF4-204ENST00000495355 UNC5CLQ8IV45 518 aa26.32■■□□□ 1.8
YIPF4-204ENST00000495355 GJD4Q96KN9 370 aaPredicted RBP26.32■■□□□ 1.8
YIPF4-204ENST00000495355 EIF3AQ14152 1382 aaKnown RBP26.32■■□□□ 1.8
YIPF4-204ENST00000495355 NWD2Q9ULI1 1742 aa26.31■■□□□ 1.8
YIPF4-204ENST00000495355 PLEKHG5O94827 1062 aa26.3■■□□□ 1.8
YIPF4-204ENST00000495355 ATAD2Q6PL18 1390 aa26.3■■□□□ 1.8
YIPF4-204ENST00000495355 NBPF1Q3BBV0 1214 aa26.29■■□□□ 1.8
YIPF4-204ENST00000495355 TOPAZ1Q8N9V7 1692 aa26.28■■□□□ 1.8
YIPF4-204ENST00000495355 ITSN1Q15811 1721 aa26.28■■□□□ 1.8
YIPF4-204ENST00000495355 LMOD2Q6P5Q4 547 aa26.28■■□□□ 1.8
YIPF4-204ENST00000495355 NRAPQ86VF7 1730 aa26.28■■□□□ 1.8
YIPF4-204ENST00000495355 BRWD3Q6RI45 1802 aa26.25■■□□□ 1.79
YIPF4-204ENST00000495355 GPRASP1Q5JY77 1395 aa26.24■■□□□ 1.79
YIPF4-204ENST00000495355 NUDT16Q96DE0 195 aaKnown RBP26.24■■□□□ 1.79
YIPF4-204ENST00000495355 FAM83GA6ND36 823 aa26.23■■□□□ 1.79
YIPF4-204ENST00000495355 HAP1P54257 671 aaPredicted RBP26.23■■□□□ 1.79
YIPF4-204ENST00000495355 VPS72Q15906 364 aa26.21■■□□□ 1.79
YIPF4-204ENST00000495355 CDK19Q9BWU1 502 aa26.21■■□□□ 1.79
YIPF4-204ENST00000495355 NGDNQ8NEJ9 315 aaKnown RBP26.2■■□□□ 1.78
YIPF4-204ENST00000495355 COL14A1Q05707 1796 aaKnown RBP26.19■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms