RNA–Protein interactions for RNA: ENST00000495123.5

PKP4-216, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-216ENST00000495123 ADGRL3Q9HAR2 1447 aa12.46□□□□□ -0.41
PKP4-216ENST00000495123 NALCNQ8IZF0 1738 aa12.46□□□□□ -0.41
PKP4-216ENST00000495123 SLC4A2P04920 1241 aa12.46□□□□□ -0.41
PKP4-216ENST00000495123 NBPF1Q3BBV0 1214 aa12.46□□□□□ -0.41
PKP4-216ENST00000495123 C19orf44Q9H6X5 657 aa12.46□□□□□ -0.41
PKP4-216ENST00000495123 TRAK1Q9UPV9 953 aa12.45□□□□□ -0.42
PKP4-216ENST00000495123 KIAA1210Q9ULL0 1709 aa12.45□□□□□ -0.42
PKP4-216ENST00000495123 CLSPNQ9HAW4 1339 aa12.44□□□□□ -0.42
PKP4-216ENST00000495123 DLC1Q96QB1 1528 aa12.44□□□□□ -0.42
PKP4-216ENST00000495123 NBPF8Q3BBV2 869 aa12.44□□□□□ -0.42
PKP4-216ENST00000495123 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
PKP4-216ENST00000495123 FAM135BQ49AJ0 1406 aa12.44□□□□□ -0.42
PKP4-216ENST00000495123 ATF3P18847 181 aa12.43□□□□□ -0.42
PKP4-216ENST00000495123 CADPS2Q86UW7 1296 aa12.43□□□□□ -0.42
PKP4-216ENST00000495123 SIRT1Q96EB6 747 aa12.43□□□□□ -0.42
PKP4-216ENST00000495123 TRPM1Q7Z4N2 1603 aa12.43□□□□□ -0.42
PKP4-216ENST00000495123 DCCP43146 1447 aa12.43□□□□□ -0.42
PKP4-216ENST00000495123 PRAM1Q96QH2 718 aa12.42□□□□□ -0.42
PKP4-216ENST00000495123 SLAIN2Q9P270 581 aa12.42□□□□□ -0.42
PKP4-216ENST00000495123 MST1RQ04912 1400 aa12.41□□□□□ -0.42
PKP4-216ENST00000495123 SAFB2Q14151 953 aaKnown RBP eCLIP12.41□□□□□ -0.42
PKP4-216ENST00000495123 POGKQ9P215 609 aa12.4□□□□□ -0.42
PKP4-216ENST00000495123 ROBO1Q9Y6N7 1651 aa12.4□□□□□ -0.42
PKP4-216ENST00000495123 ARHGEF28Q8N1W1 1705 aaKnown RBP12.4□□□□□ -0.43
PKP4-216ENST00000495123 CDC42BPGQ6DT37 1551 aa12.39□□□□□ -0.43
PKP4-216ENST00000495123 HSPA1LP34931 641 aa12.39□□□□□ -0.43
PKP4-216ENST00000495123 ROCK2O75116 1388 aaKnown RBP12.39□□□□□ -0.43
PKP4-216ENST00000495123 C1orf167Q5SNV9 1468 aa12.38□□□□□ -0.43
PKP4-216ENST00000495123 RALGAPBQ86X10 1494 aa12.37□□□□□ -0.43
PKP4-216ENST00000495123 MINK1Q8N4C8 1332 aaPredicted RBP12.37□□□□□ -0.43
PKP4-216ENST00000495123 GPRASP1Q5JY77 1395 aa12.36□□□□□ -0.43
PKP4-216ENST00000495123 NUTM2FA1L443 756 aa12.36□□□□□ -0.43
PKP4-216ENST00000495123 BRINP3Q76B58 766 aa12.36□□□□□ -0.43
PKP4-216ENST00000495123 HIRIP3Q9BW71 556 aaPredicted RBP12.36□□□□□ -0.43
PKP4-216ENST00000495123 ADGRB2O60241 1585 aa12.35□□□□□ -0.43
PKP4-216ENST00000495123 FMN2Q9NZ56 1722 aa12.34□□□□□ -0.43
PKP4-216ENST00000495123 ORAI2Q96SN7 254 aa12.34□□□□□ -0.43
PKP4-216ENST00000495123 TIMELESSQ9UNS1 1208 aa12.34□□□□□ -0.43
PKP4-216ENST00000495123 DDX17Q92841 729 aaKnown RBP12.33□□□□□ -0.44
PKP4-216ENST00000495123 CARD11Q9BXL7 1154 aa12.33□□□□□ -0.44
PKP4-216ENST00000495123 CENPJQ9HC77 1338 aaPredicted RBP12.33□□□□□ -0.44
PKP4-216ENST00000495123 MYCNP04198 464 aaPredicted RBP12.32□□□□□ -0.44
PKP4-216ENST00000495123 AHDC1Q5TGY3 1603 aaPredicted RBP12.32□□□□□ -0.44
PKP4-216ENST00000495123 PHLPP1O60346 1717 aa12.31□□□□□ -0.44
PKP4-216ENST00000495123 USP32Q8NFA0 1604 aa12.31□□□□□ -0.44
PKP4-216ENST00000495123 WASLO00401 505 aaPredicted RBP12.31□□□□□ -0.44
PKP4-216ENST00000495123 ESCO1Q5FWF5 840 aa12.31□□□□□ -0.44
PKP4-216ENST00000495123 QRICH2Q9H0J4 1663 aa12.31□□□□□ -0.44
PKP4-216ENST00000495123 COL16A1Q07092 1604 aaPredicted RBP12.3□□□□□ -0.44
PKP4-216ENST00000495123 NHSL1Q5SYE7 1610 aa12.3□□□□□ -0.44
PKP4-216ENST00000495123 TULP4Q9NRJ4 1543 aa12.3□□□□□ -0.44
PKP4-216ENST00000495123 PRR36Q9H6K5 1346 aa12.3□□□□□ -0.44
PKP4-216ENST00000495123 EIF3AQ14152 1382 aaKnown RBP12.29□□□□□ -0.44
PKP4-216ENST00000495123 ANKARQ7Z5J8 1434 aa12.28□□□□□ -0.44
PKP4-216ENST00000495123 RGPD8O14715 1765 aaPredicted RBP12.28□□□□□ -0.44
PKP4-216ENST00000495123 CDK19Q9BWU1 502 aa12.28□□□□□ -0.44
PKP4-216ENST00000495123 ATP7BP35670 1465 aa12.27□□□□□ -0.45
PKP4-216ENST00000495123 FOXO3O43524 673 aa12.26□□□□□ -0.45
PKP4-216ENST00000495123 PMFBP1Q8TBY8 1022 aa12.26□□□□□ -0.45
PKP4-216ENST00000495123 PHF8Q9UPP1 1060 aa12.26□□□□□ -0.45
PKP4-216ENST00000495123 KIF1AQ12756 1690 aa12.26□□□□□ -0.45
PKP4-216ENST00000495123 XPCQ01831 940 aaPredicted RBP12.25□□□□□ -0.45
PKP4-216ENST00000495123 NUDT16Q96DE0 195 aaKnown RBP12.25□□□□□ -0.45
PKP4-216ENST00000495123 CABP2Q9NPB3 220 aa12.25□□□□□ -0.45
PKP4-216ENST00000495123 SOS2Q07890 1332 aaPredicted RBP12.25□□□□□ -0.45
PKP4-216ENST00000495123 NPHP3Q7Z494 1330 aa12.25□□□□□ -0.45
PKP4-216ENST00000495123 PXDNQ92626 1479 aa12.25□□□□□ -0.45
PKP4-216ENST00000495123 ST20-MTHFSA0A0A6YYL1 179 aa12.24□□□□□ -0.45
PKP4-216ENST00000495123 SRPK2P78362 688 aaKnown RBP12.24□□□□□ -0.45
PKP4-216ENST00000495123 USP47Q96K76 1375 aa12.24□□□□□ -0.45
PKP4-216ENST00000495123 JCADQ9P266 1359 aa12.24□□□□□ -0.45
PKP4-216ENST00000495123 TOPAZ1Q8N9V7 1692 aa12.23□□□□□ -0.45
PKP4-216ENST00000495123 SBNO2Q9Y2G9 1366 aa12.23□□□□□ -0.45
PKP4-216ENST00000495123 EVC2Q86UK5 1308 aa12.23□□□□□ -0.45
PKP4-216ENST00000495123 LRRC59Q96AG4 307 aaKnown RBP12.22□□□□□ -0.45
PKP4-216ENST00000495123 TESK2Q96S53 571 aa12.22□□□□□ -0.45
PKP4-216ENST00000495123 PNPLA6Q8IY17 1366 aa12.21□□□□□ -0.45
PKP4-216ENST00000495123 ITSN1Q15811 1721 aa12.21□□□□□ -0.45
PKP4-216ENST00000495123 KRT28Q7Z3Y7 464 aa12.21□□□□□ -0.45
PKP4-216ENST00000495123 CCDC61Q9Y6R9 512 aa12.21□□□□□ -0.45
PKP4-216ENST00000495123 SHPRHQ149N8 1683 aa12.21□□□□□ -0.45
PKP4-216ENST00000495123 MED1Q15648 1581 aaPredicted RBP12.21□□□□□ -0.46
PKP4-216ENST00000495123 PPIP5K1Q6PFW1 1433 aa12.2□□□□□ -0.46
PKP4-216ENST00000495123 PLEKHG3A1L390 1219 aa12.19□□□□□ -0.46
PKP4-216ENST00000495123 PSME1Q06323 249 aa12.19□□□□□ -0.46
PKP4-216ENST00000495123 POTEDQ86YR6 584 aa12.19□□□□□ -0.46
PKP4-216ENST00000495123 NGDNQ8NEJ9 315 aaKnown RBP12.19□□□□□ -0.46
PKP4-216ENST00000495123 LRP6O75581 1613 aa12.19□□□□□ -0.46
PKP4-216ENST00000495123 POLR3AO14802 1390 aaPredicted RBP12.18□□□□□ -0.46
PKP4-216ENST00000495123 ACEP12821 1306 aa12.18□□□□□ -0.46
PKP4-216ENST00000495123 SPATA31A3Q5VYP0 1347 aa12.18□□□□□ -0.46
PKP4-216ENST00000495123 CABP1Q9NZU7 370 aa12.18□□□□□ -0.46
PKP4-216ENST00000495123 SBNO1A3KN83 1393 aa12.18□□□□□ -0.46
PKP4-216ENST00000495123 ATAD2Q6PL18 1390 aa12.18□□□□□ -0.46
PKP4-216ENST00000495123 TRPM3Q9HCF6 1732 aaPredicted RBP12.17□□□□□ -0.46
PKP4-216ENST00000495123 SPATA31A6Q5VVP1 1343 aa12.17□□□□□ -0.46
PKP4-216ENST00000495123 TNS3Q68CZ2 1445 aa12.17□□□□□ -0.46
PKP4-216ENST00000495123 DISP3Q9P2K9 1392 aa12.17□□□□□ -0.46
PKP4-216ENST00000495123 COL22A1Q8NFW1 1626 aaPredicted RBP12.16□□□□□ -0.46
PKP4-216ENST00000495123 NUTM2BA6NNL0 878 aaPredicted RBP12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms