RNA–Protein interactions for RNA: ENST00000495082.5

SLC13A3-211, Transcript of solute carrier family 13 member 3, humanhuman

TSL 1 (best) BASIC

Gene SLC13A3, Length 1,887 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-211ENST00000495082 TULP4Q9NRJ4 1543 aa15.96■□□□□ 0.15
SLC13A3-211ENST00000495082 CHD2O14647 1828 aaKnown RBP15.95■□□□□ 0.14
SLC13A3-211ENST00000495082 SAFB2Q14151 953 aaKnown RBP eCLIP15.95■□□□□ 0.14
SLC13A3-211ENST00000495082 STRCQ7RTU9 1775 aa15.94■□□□□ 0.14
SLC13A3-211ENST00000495082 KCNA6P17658 529 aa15.94■□□□□ 0.14
SLC13A3-211ENST00000495082 NWD1Q149M9 1564 aa15.94■□□□□ 0.14
SLC13A3-211ENST00000495082 MINK1Q8N4C8 1332 aaPredicted RBP15.93■□□□□ 0.14
SLC13A3-211ENST00000495082 POLR3GLQ9BT43 218 aa15.93■□□□□ 0.14
SLC13A3-211ENST00000495082 ADGRB2O60241 1585 aa15.92■□□□□ 0.14
SLC13A3-211ENST00000495082 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
SLC13A3-211ENST00000495082 NKTRP30414 1462 aaKnown RBP15.89■□□□□ 0.13
SLC13A3-211ENST00000495082 ATAD2Q6PL18 1390 aa15.89■□□□□ 0.13
SLC13A3-211ENST00000495082 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.89■□□□□ 0.13
SLC13A3-211ENST00000495082 WASLO00401 505 aaPredicted RBP15.88■□□□□ 0.13
SLC13A3-211ENST00000495082 CDK19Q9BWU1 502 aa15.88■□□□□ 0.13
SLC13A3-211ENST00000495082 NINLQ9Y2I6 1382 aa15.88■□□□□ 0.13
SLC13A3-211ENST00000495082 MYOM1P52179 1685 aa15.88■□□□□ 0.13
SLC13A3-211ENST00000495082 SRPK2P78362 688 aaKnown RBP15.87■□□□□ 0.13
SLC13A3-211ENST00000495082 CABP2Q9NPB3 220 aa15.87■□□□□ 0.13
SLC13A3-211ENST00000495082 DMRT2Q9Y5R5 561 aa15.87■□□□□ 0.13
SLC13A3-211ENST00000495082 PANK3Q9H999 370 aa15.84■□□□□ 0.13
SLC13A3-211ENST00000495082 ADGRL3Q9HAR2 1447 aa15.83■□□□□ 0.12
SLC13A3-211ENST00000495082 NCOA3Q9Y6Q9 1424 aa15.83■□□□□ 0.12
SLC13A3-211ENST00000495082 PER1O15534 1290 aaPredicted RBP15.82■□□□□ 0.12
SLC13A3-211ENST00000495082 SLC12A5Q9H2X9 1139 aa15.82■□□□□ 0.12
SLC13A3-211ENST00000495082 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
SLC13A3-211ENST00000495082 PROSER2Q86WR7 435 aaPredicted RBP15.81■□□□□ 0.12
SLC13A3-211ENST00000495082 TMC1Q8TDI8 760 aa15.81■□□□□ 0.12
SLC13A3-211ENST00000495082 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
SLC13A3-211ENST00000495082 STRCP1A6NGW2 1772 aa15.81■□□□□ 0.12
SLC13A3-211ENST00000495082 ATP7BP35670 1465 aa15.81■□□□□ 0.12
SLC13A3-211ENST00000495082 ANP32CO43423 234 aa15.8■□□□□ 0.12
SLC13A3-211ENST00000495082 NUDT16Q96DE0 195 aaKnown RBP15.8■□□□□ 0.12
SLC13A3-211ENST00000495082 NALCNQ8IZF0 1738 aa15.8■□□□□ 0.12
SLC13A3-211ENST00000495082 MIER1Q8N108 512 aa15.8■□□□□ 0.12
SLC13A3-211ENST00000495082 CCDC61Q9Y6R9 512 aa15.8■□□□□ 0.12
SLC13A3-211ENST00000495082 ANKARQ7Z5J8 1434 aa15.79■□□□□ 0.12
SLC13A3-211ENST00000495082 PRR36Q9H6K5 1346 aa15.79■□□□□ 0.12
SLC13A3-211ENST00000495082 TMEM94Q12767 1356 aa15.78■□□□□ 0.12
SLC13A3-211ENST00000495082 CD163L1Q9NR16 1453 aa15.77■□□□□ 0.12
SLC13A3-211ENST00000495082 PPIP5K1Q6PFW1 1433 aa15.77■□□□□ 0.12
SLC13A3-211ENST00000495082 ZNF335Q9H4Z2 1342 aaPredicted RBP15.77■□□□□ 0.12
SLC13A3-211ENST00000495082 CARD14Q9BXL6 1004 aa15.77■□□□□ 0.11
SLC13A3-211ENST00000495082 TERF2IPQ9NYB0 399 aa15.77■□□□□ 0.11
SLC13A3-211ENST00000495082 CABP1Q9NZU7 370 aa15.77■□□□□ 0.11
SLC13A3-211ENST00000495082 KNSTRNQ9Y448 316 aa15.77■□□□□ 0.11
SLC13A3-211ENST00000495082 NPC1L1Q9UHC9 1359 aa15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 RBM33Q96EV2 1170 aaKnown RBP15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 C19orf44Q9H6X5 657 aa15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 FMN2Q9NZ56 1722 aa15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 A0A1W2PP64 1363 aa15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 TOPAZ1Q8N9V7 1692 aa15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 PRKRIP1Q9H875 184 aaPredicted RBP15.76■□□□□ 0.11
SLC13A3-211ENST00000495082 DCCP43146 1447 aa15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 KTN1Q86UP2 1357 aaKnown RBP15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 USP32Q8NFA0 1604 aa15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 PLEKHG3A1L390 1219 aa15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 C14orf37Q86TY3 774 aa15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 CPSF1Q10570 1443 aaKnown RBP15.75■□□□□ 0.11
SLC13A3-211ENST00000495082 LRRC7Q96NW7 1537 aa15.74■□□□□ 0.11
SLC13A3-211ENST00000495082 AMER1Q5JTC6 1135 aaPredicted RBP15.74■□□□□ 0.11
SLC13A3-211ENST00000495082 HDGFL2Q7Z4V5 671 aaPredicted RBP15.74■□□□□ 0.11
SLC13A3-211ENST00000495082 NSD3Q9BZ95 1437 aa15.73■□□□□ 0.11
SLC13A3-211ENST00000495082 ITSN1Q15811 1721 aa15.72■□□□□ 0.11
SLC13A3-211ENST00000495082 RALBP1Q15311 655 aa15.71■□□□□ 0.11
SLC13A3-211ENST00000495082 NUTM2FA1L443 756 aa15.71■□□□□ 0.11
SLC13A3-211ENST00000495082 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
SLC13A3-211ENST00000495082 PARD3Q8TEW0 1356 aa15.71■□□□□ 0.1
SLC13A3-211ENST00000495082 CGNL1Q0VF96 1302 aa15.7■□□□□ 0.1
SLC13A3-211ENST00000495082 CCER2I3L3R5 266 aa15.7■□□□□ 0.1
SLC13A3-211ENST00000495082 POLR3AO14802 1390 aaPredicted RBP15.7■□□□□ 0.1
SLC13A3-211ENST00000495082 MSH6P52701 1360 aa15.7■□□□□ 0.1
SLC13A3-211ENST00000495082 NSD2O96028 1365 aa15.69■□□□□ 0.1
SLC13A3-211ENST00000495082 EDC4Q6P2E9 1401 aaKnown RBP15.69■□□□□ 0.1
SLC13A3-211ENST00000495082 ACEP12821 1306 aa15.68■□□□□ 0.1
SLC13A3-211ENST00000495082 XIRP1Q702N8 1843 aaKnown RBP15.68■□□□□ 0.1
SLC13A3-211ENST00000495082 ATF3P18847 181 aa15.68■□□□□ 0.1
SLC13A3-211ENST00000495082 CC2D1BQ5T0F9 858 aaKnown RBP15.68■□□□□ 0.1
SLC13A3-211ENST00000495082 CADPS2Q86UW7 1296 aa15.68■□□□□ 0.1
SLC13A3-211ENST00000495082 AKAP12Q02952 1782 aa15.67■□□□□ 0.1
SLC13A3-211ENST00000495082 MST1RQ04912 1400 aa15.67■□□□□ 0.1
SLC13A3-211ENST00000495082 C1orf167Q5SNV9 1468 aa15.66■□□□□ 0.1
SLC13A3-211ENST00000495082 MON2Q7Z3U7 1717 aa15.66■□□□□ 0.1
SLC13A3-211ENST00000495082 LTBP4Q8N2S1 1624 aa15.66■□□□□ 0.1
SLC13A3-211ENST00000495082 RGPD8O14715 1765 aaPredicted RBP15.65■□□□□ 0.1
SLC13A3-211ENST00000495082 USP6P35125 1406 aa15.65■□□□□ 0.1
SLC13A3-211ENST00000495082 PHF8Q9UPP1 1060 aa15.65■□□□□ 0.1
SLC13A3-211ENST00000495082 PMFBP1Q8TBY8 1022 aa15.65■□□□□ 0.1
SLC13A3-211ENST00000495082 MYBBP1AQ9BQG0 1328 aaKnown RBP15.65■□□□□ 0.1
SLC13A3-211ENST00000495082 SSH2Q76I76 1423 aa15.64■□□□□ 0.09
SLC13A3-211ENST00000495082 ESCO1Q5FWF5 840 aa15.64■□□□□ 0.09
SLC13A3-211ENST00000495082 NGDNQ8NEJ9 315 aaKnown RBP15.64■□□□□ 0.09
SLC13A3-211ENST00000495082 FYB1O15117 783 aa15.63■□□□□ 0.09
SLC13A3-211ENST00000495082 CNGB1Q14028 1251 aaPredicted RBP15.63■□□□□ 0.09
SLC13A3-211ENST00000495082 BRD4O60885 1362 aaPredicted RBP15.63■□□□□ 0.09
SLC13A3-211ENST00000495082 NRKQ7Z2Y5 1582 aa15.63■□□□□ 0.09
SLC13A3-211ENST00000495082 ORAI2Q96SN7 254 aa15.61■□□□□ 0.09
SLC13A3-211ENST00000495082 TTC21BQ7Z4L5 1316 aa15.61■□□□□ 0.09
SLC13A3-211ENST00000495082 KIF1AQ12756 1690 aa15.61■□□□□ 0.09
SLC13A3-211ENST00000495082 NLRP13Q86W25 1043 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms