RNA–Protein interactions for RNA: ENST00000494945.1

PKP4-215, Transcript of plakophilin 4, humanhuman

TSL 5

Gene PKP4, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-215ENST00000494945 ITSN1Q15811 1721 aa15.26■□□□□ 0.03
PKP4-215ENST00000494945 PUS7Q96PZ0 661 aaKnown RBP15.25■□□□□ 0.03
PKP4-215ENST00000494945 EVC2Q86UK5 1308 aa15.24■□□□□ 0.03
PKP4-215ENST00000494945 RGPD8O14715 1765 aaPredicted RBP15.23■□□□□ 0.03
PKP4-215ENST00000494945 NALCNQ8IZF0 1738 aa15.23■□□□□ 0.03
PKP4-215ENST00000494945 STRCP1A6NGW2 1772 aa15.22■□□□□ 0.03
PKP4-215ENST00000494945 ROBO2Q9HCK4 1378 aa15.22■□□□□ 0.03
PKP4-215ENST00000494945 PLEKHH1Q9ULM0 1364 aa15.22■□□□□ 0.03
PKP4-215ENST00000494945 TOPAZ1Q8N9V7 1692 aa15.22■□□□□ 0.03
PKP4-215ENST00000494945 AKAP12Q02952 1782 aa15.21■□□□□ 0.03
PKP4-215ENST00000494945 NCKAP5LQ9HCH0 1330 aa15.21■□□□□ 0.03
PKP4-215ENST00000494945 USP32Q8NFA0 1604 aa15.21■□□□□ 0.02
PKP4-215ENST00000494945 FMN2Q9NZ56 1722 aa15.2■□□□□ 0.02
PKP4-215ENST00000494945 SAFB2Q14151 953 aaKnown RBP eCLIP15.2■□□□□ 0.02
PKP4-215ENST00000494945 WAPLQ7Z5K2 1190 aa15.2■□□□□ 0.02
PKP4-215ENST00000494945 MIER1Q8N108 512 aa15.2■□□□□ 0.02
PKP4-215ENST00000494945 AMOTL2Q9Y2J4 779 aa15.2■□□□□ 0.02
PKP4-215ENST00000494945 MINK1Q8N4C8 1332 aaPredicted RBP15.19■□□□□ 0.02
PKP4-215ENST00000494945 NINLQ9Y2I6 1382 aa15.19■□□□□ 0.02
PKP4-215ENST00000494945 ANKRD26Q9UPS8 1709 aa15.18■□□□□ 0.02
PKP4-215ENST00000494945 ANP32CO43423 234 aa15.18■□□□□ 0.02
PKP4-215ENST00000494945 ATAD2Q6PL18 1390 aa15.18■□□□□ 0.02
PKP4-215ENST00000494945 MON2Q7Z3U7 1717 aa15.17■□□□□ 0.02
PKP4-215ENST00000494945 KIF20BQ96Q89 1820 aa15.17■□□□□ 0.02
PKP4-215ENST00000494945 NKTRP30414 1462 aaKnown RBP15.17■□□□□ 0.02
PKP4-215ENST00000494945 CDC42BPGQ6DT37 1551 aa15.16■□□□□ 0.02
PKP4-215ENST00000494945 XIRP1Q702N8 1843 aaKnown RBP15.16■□□□□ 0.02
PKP4-215ENST00000494945 HSPA2P54652 639 aa15.15■□□□□ 0.02
PKP4-215ENST00000494945 KCNA6P17658 529 aa15.14■□□□□ 0.01
PKP4-215ENST00000494945 SRPK2P78362 688 aaKnown RBP15.14■□□□□ 0.01
PKP4-215ENST00000494945 CDK19Q9BWU1 502 aa15.14■□□□□ 0.01
PKP4-215ENST00000494945 PANK3Q9H999 370 aa15.14■□□□□ 0.01
PKP4-215ENST00000494945 KTN1Q86UP2 1357 aaKnown RBP15.13■□□□□ 0.01
PKP4-215ENST00000494945 WASLO00401 505 aaPredicted RBP15.13■□□□□ 0.01
PKP4-215ENST00000494945 CABP2Q9NPB3 220 aa15.13■□□□□ 0.01
PKP4-215ENST00000494945 PER1O15534 1290 aaPredicted RBP15.12■□□□□ 0.01
PKP4-215ENST00000494945 ATP7BP35670 1465 aa15.12■□□□□ 0.01
PKP4-215ENST00000494945 ANKRD36BQ8N2N9 1353 aa15.11■□□□□ 0.01
PKP4-215ENST00000494945 TMC1Q8TDI8 760 aa15.1■□□□□ 0.01
PKP4-215ENST00000494945 PRKRIP1Q9H875 184 aaPredicted RBP15.1■□□□□ 0.01
PKP4-215ENST00000494945 NPC1L1Q9UHC9 1359 aa15.1■□□□□ 0.01
PKP4-215ENST00000494945 ADGRL3Q9HAR2 1447 aa15.09■□□□□ 0.01
PKP4-215ENST00000494945 CCER2I3L3R5 266 aa15.09■□□□□ 0.01
PKP4-215ENST00000494945 CD163L1Q9NR16 1453 aa15.08■□□□□ 0.01
PKP4-215ENST00000494945 NRKQ7Z2Y5 1582 aa15.08■□□□□ 0
PKP4-215ENST00000494945 SLC12A5Q9H2X9 1139 aa15.08■□□□□ 0
PKP4-215ENST00000494945 KNSTRNQ9Y448 316 aa15.08■□□□□ 0
PKP4-215ENST00000494945 PPIP5K1Q6PFW1 1433 aa15.08■□□□□ 0
PKP4-215ENST00000494945 ANKARQ7Z5J8 1434 aa15.08■□□□□ 0
PKP4-215ENST00000494945 RALBP1Q15311 655 aa15.06■□□□□ 0
PKP4-215ENST00000494945 NUDT16Q96DE0 195 aaKnown RBP15.06■□□□□ 0
PKP4-215ENST00000494945 TERF2IPQ9NYB0 399 aa15.06■□□□□ 0
PKP4-215ENST00000494945 PARD3Q8TEW0 1356 aa15.06■□□□□ 0
PKP4-215ENST00000494945 NSD3Q9BZ95 1437 aa15.06■□□□□ 0
PKP4-215ENST00000494945 NCOA3Q9Y6Q9 1424 aa15.06■□□□□ 0
PKP4-215ENST00000494945 CCDC61Q9Y6R9 512 aa15.05■□□□□ -0
PKP4-215ENST00000494945 A0A1W2PP64 1363 aa15.05■□□□□ -0
PKP4-215ENST00000494945 KIF1AQ12756 1690 aa15.04■□□□□ -0
PKP4-215ENST00000494945 AMER1Q5JTC6 1135 aaPredicted RBP15.04■□□□□ -0
PKP4-215ENST00000494945 CARD14Q9BXL6 1004 aa15.04■□□□□ -0
PKP4-215ENST00000494945 DMRT2Q9Y5R5 561 aa15.04■□□□□ -0
PKP4-215ENST00000494945 CPSF1Q10570 1443 aaKnown RBP15.03■□□□□ -0
PKP4-215ENST00000494945 PRR36Q9H6K5 1346 aa15.03■□□□□ -0
PKP4-215ENST00000494945 HDGFL2Q7Z4V5 671 aaPredicted RBP15.03■□□□□ -0
PKP4-215ENST00000494945 PROSER2Q86WR7 435 aaPredicted RBP15.03■□□□□ -0
PKP4-215ENST00000494945 NSD2O96028 1365 aa15.02■□□□□ -0
PKP4-215ENST00000494945 MAP2P11137 1827 aaKnown RBP15.02■□□□□ -0
PKP4-215ENST00000494945 CABP1Q9NZU7 370 aa15.02■□□□□ -0
PKP4-215ENST00000494945 DCCP43146 1447 aa15□□□□□ -0.01
PKP4-215ENST00000494945 USP54Q70EL1 1684 aa15□□□□□ -0.01
PKP4-215ENST00000494945 CGNL1Q0VF96 1302 aa15□□□□□ -0.01
PKP4-215ENST00000494945 MYBBP1AQ9BQG0 1328 aaKnown RBP15□□□□□ -0.01
PKP4-215ENST00000494945 PLEKHG3A1L390 1219 aa15□□□□□ -0.01
PKP4-215ENST00000494945 CC2D1BQ5T0F9 858 aaKnown RBP15□□□□□ -0.01
PKP4-215ENST00000494945 EDC4Q6P2E9 1401 aaKnown RBP15□□□□□ -0.01
PKP4-215ENST00000494945 LRRC7Q96NW7 1537 aa14.98□□□□□ -0.01
PKP4-215ENST00000494945 C14orf37Q86TY3 774 aa14.98□□□□□ -0.01
PKP4-215ENST00000494945 ZNF692Q9BU19 519 aaPredicted RBP14.98□□□□□ -0.01
PKP4-215ENST00000494945 POLR3AO14802 1390 aaPredicted RBP14.98□□□□□ -0.01
PKP4-215ENST00000494945 TMEM94Q12767 1356 aa14.98□□□□□ -0.01
PKP4-215ENST00000494945 CNGB1Q14028 1251 aaPredicted RBP14.97□□□□□ -0.01
PKP4-215ENST00000494945 BRD4O60885 1362 aaPredicted RBP14.97□□□□□ -0.01
PKP4-215ENST00000494945 C19orf44Q9H6X5 657 aa14.96□□□□□ -0.01
PKP4-215ENST00000494945 MARF1Q9Y4F3 1742 aaKnown RBP14.96□□□□□ -0.01
PKP4-215ENST00000494945 USP6P35125 1406 aa14.95□□□□□ -0.02
PKP4-215ENST00000494945 NUTM2FA1L443 756 aa14.95□□□□□ -0.02
PKP4-215ENST00000494945 NLRP13Q86W25 1043 aa14.95□□□□□ -0.02
PKP4-215ENST00000494945 RBM33Q96EV2 1170 aaKnown RBP14.95□□□□□ -0.02
PKP4-215ENST00000494945 PIK3C2AO00443 1686 aa14.95□□□□□ -0.02
PKP4-215ENST00000494945 ACEP12821 1306 aa14.94□□□□□ -0.02
PKP4-215ENST00000494945 ZNF335Q9H4Z2 1342 aaPredicted RBP14.94□□□□□ -0.02
PKP4-215ENST00000494945 MSH6P52701 1360 aa14.94□□□□□ -0.02
PKP4-215ENST00000494945 TRPM3Q9HCF6 1732 aaPredicted RBP14.94□□□□□ -0.02
PKP4-215ENST00000494945 MRS2Q9HD23 443 aa14.93□□□□□ -0.02
PKP4-215ENST00000494945 MST1RQ04912 1400 aa14.92□□□□□ -0.02
PKP4-215ENST00000494945 SSH2Q76I76 1423 aa14.92□□□□□ -0.02
PKP4-215ENST00000494945 C1orf167Q5SNV9 1468 aa14.92□□□□□ -0.02
PKP4-215ENST00000494945 SHPRHQ149N8 1683 aa14.91□□□□□ -0.02
PKP4-215ENST00000494945 ATF3P18847 181 aa14.91□□□□□ -0.02
PKP4-215ENST00000494945 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms