RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 POGKQ9P215 609 aa20.74■□□□□ 0.91
SCAP-213ENST00000494938 DDX17Q92841 729 aaKnown RBP20.73■□□□□ 0.91
SCAP-213ENST00000494938 NALCNQ8IZF0 1738 aa20.73■□□□□ 0.91
SCAP-213ENST00000494938 DISP3Q9P2K9 1392 aa20.72■□□□□ 0.91
SCAP-213ENST00000494938 LAMC1P11047 1609 aa20.71■□□□□ 0.91
SCAP-213ENST00000494938 DLC1Q96QB1 1528 aa20.7■□□□□ 0.9
SCAP-213ENST00000494938 NUTM2FA1L443 756 aa20.7■□□□□ 0.9
SCAP-213ENST00000494938 ESCO1Q5FWF5 840 aa20.69■□□□□ 0.9
SCAP-213ENST00000494938 KNDC1Q76NI1 1749 aa20.68■□□□□ 0.9
SCAP-213ENST00000494938 NBPF8Q3BBV2 869 aa20.67■□□□□ 0.9
SCAP-213ENST00000494938 JCADQ9P266 1359 aa20.67■□□□□ 0.9
SCAP-213ENST00000494938 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
SCAP-213ENST00000494938 AHDC1Q5TGY3 1603 aaPredicted RBP20.66■□□□□ 0.9
SCAP-213ENST00000494938 CDC42BPGQ6DT37 1551 aa20.65■□□□□ 0.9
SCAP-213ENST00000494938 MINK1Q8N4C8 1332 aaPredicted RBP20.65■□□□□ 0.9
SCAP-213ENST00000494938 LRRC59Q96AG4 307 aaKnown RBP20.64■□□□□ 0.89
SCAP-213ENST00000494938 SOS2Q07890 1332 aaPredicted RBP20.63■□□□□ 0.89
SCAP-213ENST00000494938 COL16A1Q07092 1604 aaPredicted RBP20.63■□□□□ 0.89
SCAP-213ENST00000494938 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
SCAP-213ENST00000494938 FOXO3O43524 673 aa20.62■□□□□ 0.89
SCAP-213ENST00000494938 PHLPP1O60346 1717 aa20.61■□□□□ 0.89
SCAP-213ENST00000494938 MED1Q15648 1581 aaPredicted RBP20.6■□□□□ 0.89
SCAP-213ENST00000494938 ILDR2Q71H61 639 aa20.6■□□□□ 0.89
SCAP-213ENST00000494938 TONSLQ96HA7 1378 aa20.59■□□□□ 0.89
SCAP-213ENST00000494938 SPATA31A6Q5VVP1 1343 aa20.58■□□□□ 0.89
SCAP-213ENST00000494938 NPHP3Q7Z494 1330 aa20.58■□□□□ 0.89
SCAP-213ENST00000494938 RGS17Q9UGC6 210 aaPredicted RBP20.58■□□□□ 0.89
SCAP-213ENST00000494938 PHF8Q9UPP1 1060 aa20.58■□□□□ 0.89
SCAP-213ENST00000494938 KIAA1210Q9ULL0 1709 aa20.58■□□□□ 0.88
SCAP-213ENST00000494938 PRR36Q9H6K5 1346 aa20.57■□□□□ 0.88
SCAP-213ENST00000494938 XPCQ01831 940 aaPredicted RBP20.57■□□□□ 0.88
SCAP-213ENST00000494938 CDK19Q9BWU1 502 aa20.56■□□□□ 0.88
SCAP-213ENST00000494938 NHSL1Q5SYE7 1610 aa20.55■□□□□ 0.88
SCAP-213ENST00000494938 ROCK2O75116 1388 aaKnown RBP20.55■□□□□ 0.88
SCAP-213ENST00000494938 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
SCAP-213ENST00000494938 KRT28Q7Z3Y7 464 aa20.54■□□□□ 0.88
SCAP-213ENST00000494938 PMFBP1Q8TBY8 1022 aa20.54■□□□□ 0.88
SCAP-213ENST00000494938 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
SCAP-213ENST00000494938 PNPLA6Q8IY17 1366 aa20.54■□□□□ 0.88
SCAP-213ENST00000494938 ANKARQ7Z5J8 1434 aa20.53■□□□□ 0.88
SCAP-213ENST00000494938 NUTM2BA6NNL0 878 aaPredicted RBP20.53■□□□□ 0.88
SCAP-213ENST00000494938 NUTM2EB1AL46 878 aaPredicted RBP20.53■□□□□ 0.88
SCAP-213ENST00000494938 NUTM2AQ8IVF1 878 aaPredicted RBP20.53■□□□□ 0.88
SCAP-213ENST00000494938 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
SCAP-213ENST00000494938 FMN2Q9NZ56 1722 aa20.53■□□□□ 0.88
SCAP-213ENST00000494938 CLSPNQ9HAW4 1339 aa20.53■□□□□ 0.88
SCAP-213ENST00000494938 ADGRB2O60241 1585 aa20.52■□□□□ 0.88
SCAP-213ENST00000494938 PXDNQ92626 1479 aa20.52■□□□□ 0.88
SCAP-213ENST00000494938 GPRASP1Q5JY77 1395 aa20.52■□□□□ 0.88
SCAP-213ENST00000494938 LRP6O75581 1613 aa20.5■□□□□ 0.87
SCAP-213ENST00000494938 EIF3AQ14152 1382 aaKnown RBP20.49■□□□□ 0.87
SCAP-213ENST00000494938 PSME1Q06323 249 aa20.49■□□□□ 0.87
SCAP-213ENST00000494938 CARD11Q9BXL7 1154 aa20.49■□□□□ 0.87
SCAP-213ENST00000494938 ARHGEF28Q8N1W1 1705 aaKnown RBP20.49■□□□□ 0.87
SCAP-213ENST00000494938 TIMELESSQ9UNS1 1208 aa20.48■□□□□ 0.87
SCAP-213ENST00000494938 TRPM1Q7Z4N2 1603 aa20.48■□□□□ 0.87
SCAP-213ENST00000494938 SPATA31A3Q5VYP0 1347 aa20.48■□□□□ 0.87
SCAP-213ENST00000494938 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
SCAP-213ENST00000494938 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
SCAP-213ENST00000494938 MEX3CQ5U5Q3 659 aaKnown RBP20.46■□□□□ 0.87
SCAP-213ENST00000494938 POTEAQ6S8J7 498 aa20.46■□□□□ 0.87
SCAP-213ENST00000494938 CABP2Q9NPB3 220 aa20.46■□□□□ 0.87
SCAP-213ENST00000494938 CCDC61Q9Y6R9 512 aa20.46■□□□□ 0.87
SCAP-213ENST00000494938 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
SCAP-213ENST00000494938 PLEKHG3A1L390 1219 aa20.45■□□□□ 0.86
SCAP-213ENST00000494938 CCER1Q8TC90 406 aaPredicted RBP20.45■□□□□ 0.86
SCAP-213ENST00000494938 NGDNQ8NEJ9 315 aaKnown RBP20.44■□□□□ 0.86
SCAP-213ENST00000494938 SRPK2P78362 688 aaKnown RBP20.43■□□□□ 0.86
SCAP-213ENST00000494938 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
SCAP-213ENST00000494938 ATP7BP35670 1465 aa20.43■□□□□ 0.86
SCAP-213ENST00000494938 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
SCAP-213ENST00000494938 ADAMTS2O95450 1211 aa20.42■□□□□ 0.86
SCAP-213ENST00000494938 ACEP12821 1306 aa20.4■□□□□ 0.86
SCAP-213ENST00000494938 KIF1AQ12756 1690 aa20.4■□□□□ 0.86
SCAP-213ENST00000494938 EVC2Q86UK5 1308 aa20.4■□□□□ 0.86
SCAP-213ENST00000494938 RGPD8O14715 1765 aaPredicted RBP20.39■□□□□ 0.86
SCAP-213ENST00000494938 C8orf37Q96NL8 207 aa20.39■□□□□ 0.85
SCAP-213ENST00000494938 CABP1Q9NZU7 370 aa20.38■□□□□ 0.85
SCAP-213ENST00000494938 TNS3Q68CZ2 1445 aa20.37■□□□□ 0.85
SCAP-213ENST00000494938 POLR3AO14802 1390 aaPredicted RBP20.37■□□□□ 0.85
SCAP-213ENST00000494938 AFF2P51816 1311 aa20.37■□□□□ 0.85
SCAP-213ENST00000494938 ZNF772Q68DY9 489 aaPredicted RBP20.37■□□□□ 0.85
SCAP-213ENST00000494938 LMOD2Q6P5Q4 547 aa20.37■□□□□ 0.85
SCAP-213ENST00000494938 CABLES1Q8TDN4 633 aa20.37■□□□□ 0.85
SCAP-213ENST00000494938 NGLY1Q96IV0 654 aa20.36■□□□□ 0.85
SCAP-213ENST00000494938 ST20-MTHFSA0A0A6YYL1 179 aa20.35■□□□□ 0.85
SCAP-213ENST00000494938 FNBP4Q8N3X1 1017 aaPredicted RBP20.35■□□□□ 0.85
SCAP-213ENST00000494938 SBNO2Q9Y2G9 1366 aa20.34■□□□□ 0.85
SCAP-213ENST00000494938 PAK3O75914 559 aaPredicted RBP20.34■□□□□ 0.85
SCAP-213ENST00000494938 TESK2Q96S53 571 aa20.34■□□□□ 0.85
SCAP-213ENST00000494938 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
SCAP-213ENST00000494938 PLEKHG5O94827 1062 aa20.33■□□□□ 0.85
SCAP-213ENST00000494938 COL22A1Q8NFW1 1626 aaPredicted RBP20.33■□□□□ 0.84
SCAP-213ENST00000494938 PPIP5K1Q6PFW1 1433 aa20.33■□□□□ 0.84
SCAP-213ENST00000494938 SOCS7O14512 581 aa20.32■□□□□ 0.84
SCAP-213ENST00000494938 QTRT2Q9H974 415 aaKnown RBP20.31■□□□□ 0.84
SCAP-213ENST00000494938 QRICH2Q9H0J4 1663 aa20.31■□□□□ 0.84
SCAP-213ENST00000494938 PUS7Q96PZ0 661 aaKnown RBP20.28■□□□□ 0.84
SCAP-213ENST00000494938 USP21Q9UK80 565 aa20.28■□□□□ 0.84
SCAP-213ENST00000494938 NUTM2GQ5VZR2 741 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms