RNA–Protein interactions for RNA: ENST00000494810.1

PDCD6IP-215, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-215ENST00000494810 ZNF644Q9H582 1327 aaPredicted RBP9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 ADGBQ8N7X0 1667 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 NCOA2Q15596 1464 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 CEBPAP49715 358 aaPredicted RBP9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 PPP1R15BQ5SWA1 713 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 ZNF454Q8N9F8 522 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 UPF1Q92900 1129 aaKnown RBP eCLIP9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 BCL2L12Q9HB09 334 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 VPS8Q8N3P4 1428 aa9.88□□□□□ -0.83
PDCD6IP-215ENST00000494810 SPAG9O60271 1321 aaKnown RBP9.87□□□□□ -0.83
PDCD6IP-215ENST00000494810 MBD5Q9P267 1494 aa9.87□□□□□ -0.83
PDCD6IP-215ENST00000494810 PDE4AP27815 886 aa9.87□□□□□ -0.83
PDCD6IP-215ENST00000494810 HSPA2P54652 639 aa9.87□□□□□ -0.83
PDCD6IP-215ENST00000494810 MROH2AA6NES4 1674 aa9.87□□□□□ -0.83
PDCD6IP-215ENST00000494810 STRCQ7RTU9 1775 aa9.86□□□□□ -0.83
PDCD6IP-215ENST00000494810 FOSBP53539 338 aa9.85□□□□□ -0.83
PDCD6IP-215ENST00000494810 CLTCQ00610 1675 aaKnown RBP9.85□□□□□ -0.83
PDCD6IP-215ENST00000494810 A2MP01023 1474 aa9.85□□□□□ -0.83
PDCD6IP-215ENST00000494810 LRRC9Q6ZRR7 1453 aa9.85□□□□□ -0.83
PDCD6IP-215ENST00000494810 MAP3K1Q13233 1512 aa9.84□□□□□ -0.83
PDCD6IP-215ENST00000494810 PTPREP23469 700 aa9.84□□□□□ -0.83
PDCD6IP-215ENST00000494810 ANO8Q9HCE9 1232 aaPredicted RBP9.84□□□□□ -0.83
PDCD6IP-215ENST00000494810 CAMSAP2Q08AD1 1489 aa9.84□□□□□ -0.83
PDCD6IP-215ENST00000494810 NCKAP5LQ9HCH0 1330 aa9.82□□□□□ -0.84
PDCD6IP-215ENST00000494810 CNTLNQ9NXG0 1405 aa9.82□□□□□ -0.84
PDCD6IP-215ENST00000494810 ARHGEF5Q12774 1597 aa9.82□□□□□ -0.84
PDCD6IP-215ENST00000494810 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
PDCD6IP-215ENST00000494810 CCDC141Q6ZP82 1450 aa9.81□□□□□ -0.84
PDCD6IP-215ENST00000494810 BHMG1C9JSJ3 638 aaPredicted RBP9.81□□□□□ -0.84
PDCD6IP-215ENST00000494810 KANK4Q5T7N3 995 aaPredicted RBP9.81□□□□□ -0.84
PDCD6IP-215ENST00000494810 UHRF1BP1Q6BDS2 1440 aa9.81□□□□□ -0.84
PDCD6IP-215ENST00000494810 ESF1Q9H501 851 aaKnown RBP9.8□□□□□ -0.84
PDCD6IP-215ENST00000494810 ZMYM3Q14202 1370 aa9.79□□□□□ -0.84
PDCD6IP-215ENST00000494810 EVI5O60447 810 aa9.79□□□□□ -0.84
PDCD6IP-215ENST00000494810 PTPN5P54829 565 aa9.79□□□□□ -0.84
PDCD6IP-215ENST00000494810 ZBED2Q9BTP6 218 aa9.79□□□□□ -0.84
PDCD6IP-215ENST00000494810 DHX29Q7Z478 1369 aaKnown RBP9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 RSPH4AQ5TD94 716 aa9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 IFFO2Q5TF58 517 aa9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 ZDHHC16Q969W1 377 aa9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 NPATQ14207 1427 aa9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 MYO3AQ8NEV4 1616 aa9.78□□□□□ -0.84
PDCD6IP-215ENST00000494810 ZNF142P52746 1687 aaPredicted RBP9.77□□□□□ -0.84
PDCD6IP-215ENST00000494810 MAST1Q9Y2H9 1570 aa9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 MYOM3Q5VTT5 1437 aa9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 GOLGA8CPA6NN73 597 aa9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 GGT6Q6P531 493 aa9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 DDX27Q96GQ7 796 aaKnown RBP9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 LARP6Q9BRS8 491 aaKnown RBP9.77□□□□□ -0.85
PDCD6IP-215ENST00000494810 PTPRKQ15262 1439 aa9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 MIA2Q96PC5 1412 aa9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 GTPBP6O43824 516 aaPredicted RBP9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 THSD4Q6ZMP0 1018 aa9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 MRPL50Q8N5N7 158 aaKnown RBP9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 FBXO41Q8TF61 875 aa9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 CROCC2H7BZ55 1655 aa9.76□□□□□ -0.85
PDCD6IP-215ENST00000494810 MAP3K9P80192 1104 aa9.75□□□□□ -0.85
PDCD6IP-215ENST00000494810 KIF3BO15066 747 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 RGS20O76081 388 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 MFSD10Q14728 455 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 WNT2BQ93097 391 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 ADAM33Q9BZ11 813 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 NBPF3Q9H094 633 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 CAMSAP1Q5T5Y3 1602 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 RNF17Q9BXT8 1623 aaKnown RBP9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 PTPN23Q9H3S7 1636 aa9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 CFAP65Q6ZU64 1925 aaKnown RBP9.74□□□□□ -0.85
PDCD6IP-215ENST00000494810 NCOA1Q15788 1441 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 KDM5DQ9BY66 1539 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 FAM135AQ9P2D6 1515 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 CEP170BQ9Y4F5 1589 aaPredicted RBP9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 TSPY4P0CV99 314 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 TSPY10P0CW01 314 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 EIF2AK4Q9P2K8 1649 aaKnown RBP9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 PTPRTO14522 1441 aa9.73□□□□□ -0.85
PDCD6IP-215ENST00000494810 MROH1Q8NDA8 1641 aa9.72□□□□□ -0.85
PDCD6IP-215ENST00000494810 CEP152O94986 1710 aa9.71□□□□□ -0.85
PDCD6IP-215ENST00000494810 CERKQ8TCT0 537 aa9.71□□□□□ -0.86
PDCD6IP-215ENST00000494810 DNMT1P26358 1616 aaKnown RBP9.71□□□□□ -0.86
PDCD6IP-215ENST00000494810 ZC3H13Q5T200 1668 aaKnown RBP9.71□□□□□ -0.86
PDCD6IP-215ENST00000494810 ABCC5O15440 1437 aa9.7□□□□□ -0.86
PDCD6IP-215ENST00000494810 PZPP20742 1482 aa9.7□□□□□ -0.86
PDCD6IP-215ENST00000494810 PPP1R3GB7ZBB8 358 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 POLR1AO95602 1720 aaPredicted RBP9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 PLA2R1Q13018 1463 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 TCOF1Q13428 1488 aaKnown RBP9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 FBXO31Q5XUX0 539 aaPredicted RBP9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 FGD6Q6ZV73 1430 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 LTBP4Q8N2S1 1624 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 DUOX2Q9NRD8 1548 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 SHANK2Q9UPX8 1470 aa9.69□□□□□ -0.86
PDCD6IP-215ENST00000494810 ABCC3O15438 1527 aa9.68□□□□□ -0.86
PDCD6IP-215ENST00000494810 A2ML1A8K2U0 1454 aa9.68□□□□□ -0.86
PDCD6IP-215ENST00000494810 WASHC2CQ9Y4E1 1318 aa9.68□□□□□ -0.86
PDCD6IP-215ENST00000494810 RABGEF1Q9UJ41 708 aa9.68□□□□□ -0.86
PDCD6IP-215ENST00000494810 PCDHGA10Q9Y5H3 936 aa9.68□□□□□ -0.86
PDCD6IP-215ENST00000494810 DAPK1P53355 1430 aa9.67□□□□□ -0.86
PDCD6IP-215ENST00000494810 FBXW7Q969H0 707 aa9.67□□□□□ -0.86
PDCD6IP-215ENST00000494810 EMILIN3Q9NT22 766 aa9.67□□□□□ -0.86
PDCD6IP-215ENST00000494810 DEPDC5O75140 1603 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms