RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 NPHP3Q7Z494 1330 aa21.93■■□□□ 1.1
PCCB-219ENST00000494742 TECPR2O15040 1411 aa21.92■■□□□ 1.1
PCCB-219ENST00000494742 ANKRD30BQ9BXX2 1392 aa21.92■■□□□ 1.1
PCCB-219ENST00000494742 IFT172Q9UG01 1749 aa21.92■■□□□ 1.1
PCCB-219ENST00000494742 FNBP4Q8N3X1 1017 aaPredicted RBP21.91■■□□□ 1.1
PCCB-219ENST00000494742 USP21Q9UK80 565 aa21.91■■□□□ 1.1
PCCB-219ENST00000494742 SPATA31E1Q6ZUB1 1445 aa21.9■■□□□ 1.1
PCCB-219ENST00000494742 TRPC5Q9UL62 973 aaPredicted RBP21.9■■□□□ 1.1
PCCB-219ENST00000494742 KNDC1Q76NI1 1749 aa21.89■■□□□ 1.1
PCCB-219ENST00000494742 LRPPRCP42704 1394 aaKnown RBP21.89■■□□□ 1.1
PCCB-219ENST00000494742 ADGRF5Q8IZF2 1346 aa21.89■■□□□ 1.1
PCCB-219ENST00000494742 ESCO1Q5FWF5 840 aa21.89■■□□□ 1.09
PCCB-219ENST00000494742 MYOM2P54296 1465 aa21.89■■□□□ 1.09
PCCB-219ENST00000494742 PXDNQ92626 1479 aa21.89■■□□□ 1.09
PCCB-219ENST00000494742 FOXD1Q16676 465 aa21.88■■□□□ 1.09
PCCB-219ENST00000494742 ABCC11Q96J66 1382 aa21.87■■□□□ 1.09
PCCB-219ENST00000494742 ACIN1Q9UKV3 1341 aaKnown RBP21.87■■□□□ 1.09
PCCB-219ENST00000494742 MARF1Q9Y4F3 1742 aaKnown RBP21.87■■□□□ 1.09
PCCB-219ENST00000494742 ATAD2Q6PL18 1390 aa21.87■■□□□ 1.09
PCCB-219ENST00000494742 MPHOSPH9Q99550 1183 aa21.85■■□□□ 1.09
PCCB-219ENST00000494742 PIK3C2GO75747 1445 aa21.85■■□□□ 1.09
PCCB-219ENST00000494742 ATRNO75882 1429 aa21.85■■□□□ 1.09
PCCB-219ENST00000494742 RGL3Q3MIN7 710 aa21.84■■□□□ 1.09
PCCB-219ENST00000494742 FOXO3O43524 673 aa21.83■■□□□ 1.09
PCCB-219ENST00000494742 STK26Q9P289 416 aa21.83■■□□□ 1.09
PCCB-219ENST00000494742 KIF1AQ12756 1690 aa21.82■■□□□ 1.08
PCCB-219ENST00000494742 WAPLQ7Z5K2 1190 aa21.82■■□□□ 1.08
PCCB-219ENST00000494742 SIRT1Q96EB6 747 aa21.82■■□□□ 1.08
PCCB-219ENST00000494742 FMN2Q9NZ56 1722 aa21.82■■□□□ 1.08
PCCB-219ENST00000494742 BCL9LQ86UU0 1499 aa21.8■■□□□ 1.08
PCCB-219ENST00000494742 YTHDC2Q9H6S0 1430 aaKnown RBP21.8■■□□□ 1.08
PCCB-219ENST00000494742 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.79■■□□□ 1.08
PCCB-219ENST00000494742 TMEM132EQ6IEE7 984 aa21.78■■□□□ 1.08
PCCB-219ENST00000494742 PLEKHH1Q9ULM0 1364 aa21.77■■□□□ 1.08
PCCB-219ENST00000494742 XPCQ01831 940 aaPredicted RBP21.76■■□□□ 1.07
PCCB-219ENST00000494742 SPATA31A3Q5VYP0 1347 aa21.76■■□□□ 1.07
PCCB-219ENST00000494742 NUTM2FA1L443 756 aa21.75■■□□□ 1.07
PCCB-219ENST00000494742 CCDC125Q86Z20 511 aa21.75■■□□□ 1.07
PCCB-219ENST00000494742 C14orf93Q9H972 538 aaKnown RBP21.75■■□□□ 1.07
PCCB-219ENST00000494742 NRXN1Q9ULB1 1477 aa21.75■■□□□ 1.07
PCCB-219ENST00000494742 GJD4Q96KN9 370 aaPredicted RBP21.74■■□□□ 1.07
PCCB-219ENST00000494742 DHX57Q6P158 1386 aaKnown RBP21.73■■□□□ 1.07
PCCB-219ENST00000494742 SLIT2O94813 1529 aa21.72■■□□□ 1.07
PCCB-219ENST00000494742 USP32Q8NFA0 1604 aa21.71■■□□□ 1.07
PCCB-219ENST00000494742 KRT28Q7Z3Y7 464 aa21.71■■□□□ 1.07
PCCB-219ENST00000494742 UNC5CLQ8IV45 518 aa21.71■■□□□ 1.07
PCCB-219ENST00000494742 RGPD8O14715 1765 aaPredicted RBP21.7■■□□□ 1.06
PCCB-219ENST00000494742 PSME1Q06323 249 aa21.7■■□□□ 1.06
PCCB-219ENST00000494742 PHF8Q9UPP1 1060 aa21.68■■□□□ 1.06
PCCB-219ENST00000494742 TNS3Q68CZ2 1445 aa21.68■■□□□ 1.06
PCCB-219ENST00000494742 DLC1Q96QB1 1528 aa21.67■■□□□ 1.06
PCCB-219ENST00000494742 CFAP70Q5T0N1 1121 aa21.67■■□□□ 1.06
PCCB-219ENST00000494742 EP400Q96L91 3159 aa21.67■■□□□ 1.06
PCCB-219ENST00000494742 GLI3P10071 1580 aa21.66■■□□□ 1.06
PCCB-219ENST00000494742 RALGAPBQ86X10 1494 aa21.66■■□□□ 1.06
PCCB-219ENST00000494742 SBNO1A3KN83 1393 aa21.66■■□□□ 1.06
PCCB-219ENST00000494742 ZRANB1Q9UGI0 708 aa21.65■■□□□ 1.06
PCCB-219ENST00000494742 NWD2Q9ULI1 1742 aa21.65■■□□□ 1.06
PCCB-219ENST00000494742 ANKARQ7Z5J8 1434 aa21.64■■□□□ 1.06
PCCB-219ENST00000494742 ARHGEF10O15013 1369 aa21.63■■□□□ 1.05
PCCB-219ENST00000494742 ADGRB2O60241 1585 aa21.63■■□□□ 1.05
PCCB-219ENST00000494742 HAP1P54257 671 aaPredicted RBP21.63■■□□□ 1.05
PCCB-219ENST00000494742 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
PCCB-219ENST00000494742 ABCA3Q99758 1704 aa21.62■■□□□ 1.05
PCCB-219ENST00000494742 PLCH1Q4KWH8 1693 aa21.61■■□□□ 1.05
PCCB-219ENST00000494742 VPS72Q15906 364 aa21.6■■□□□ 1.05
PCCB-219ENST00000494742 POGKQ9P215 609 aa21.6■■□□□ 1.05
PCCB-219ENST00000494742 BLMP54132 1417 aaPredicted RBP21.6■■□□□ 1.05
PCCB-219ENST00000494742 BRWD3Q6RI45 1802 aa21.59■■□□□ 1.05
PCCB-219ENST00000494742 ADGRB1O14514 1584 aa21.59■■□□□ 1.05
PCCB-219ENST00000494742 ONECUT3O60422 494 aaPredicted RBP21.58■■□□□ 1.05
PCCB-219ENST00000494742 SAFB2Q14151 953 aaKnown RBP eCLIP21.58■■□□□ 1.05
PCCB-219ENST00000494742 EIF3AQ14152 1382 aaKnown RBP21.58■■□□□ 1.04
PCCB-219ENST00000494742 CABLES1Q8TDN4 633 aa21.57■■□□□ 1.04
PCCB-219ENST00000494742 STAC3Q96MF2 364 aa21.57■■□□□ 1.04
PCCB-219ENST00000494742 RAB3GAP2Q9H2M9 1393 aa21.56■■□□□ 1.04
PCCB-219ENST00000494742 LMOD2Q6P5Q4 547 aa21.55■■□□□ 1.04
PCCB-219ENST00000494742 SEPT12Q8IYM1 358 aa21.55■■□□□ 1.04
PCCB-219ENST00000494742 TRPM3Q9HCF6 1732 aaPredicted RBP21.55■■□□□ 1.04
PCCB-219ENST00000494742 SRCAPQ6ZRS2 3230 aa21.54■■□□□ 1.04
PCCB-219ENST00000494742 PMFBP1Q8TBY8 1022 aa21.53■■□□□ 1.04
PCCB-219ENST00000494742 ALS2Q96Q42 1657 aa21.53■■□□□ 1.04
PCCB-219ENST00000494742 GPRASP1Q5JY77 1395 aa21.52■■□□□ 1.04
PCCB-219ENST00000494742 TULP4Q9NRJ4 1543 aa21.52■■□□□ 1.04
PCCB-219ENST00000494742 FAM83GA6ND36 823 aa21.51■■□□□ 1.03
PCCB-219ENST00000494742 SF3B2Q13435 895 aaKnown RBP21.51■■□□□ 1.03
PCCB-219ENST00000494742 TRAK1Q9UPV9 953 aa21.51■■□□□ 1.03
PCCB-219ENST00000494742 CCDC9Q9Y3X0 531 aaKnown RBP21.51■■□□□ 1.03
PCCB-219ENST00000494742 NRAPQ86VF7 1730 aa21.5■■□□□ 1.03
PCCB-219ENST00000494742 COL14A1Q05707 1796 aaKnown RBP21.5■■□□□ 1.03
PCCB-219ENST00000494742 KRT27Q7Z3Y8 459 aa21.49■■□□□ 1.03
PCCB-219ENST00000494742 WASLO00401 505 aaPredicted RBP21.48■■□□□ 1.03
PCCB-219ENST00000494742 DCAF11Q8TEB1 546 aa21.48■■□□□ 1.03
PCCB-219ENST00000494742 PLEKHG5O94827 1062 aa21.47■■□□□ 1.03
PCCB-219ENST00000494742 HIRIP3Q9BW71 556 aaPredicted RBP21.47■■□□□ 1.03
PCCB-219ENST00000494742 MINK1Q8N4C8 1332 aaPredicted RBP21.47■■□□□ 1.03
PCCB-219ENST00000494742 PRR36Q9H6K5 1346 aa21.47■■□□□ 1.03
PCCB-219ENST00000494742 HRCP23327 699 aa21.46■■□□□ 1.03
PCCB-219ENST00000494742 ITSN1Q15811 1721 aa21.46■■□□□ 1.03
PCCB-219ENST00000494742 CRYBG1Q9Y4K1 1723 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 83.2 ms