RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LRPPRCP42704 1394 aaKnown RBP14.09□□□□□ -0.15
MSH5-218ENST00000494646 PLEKHH1Q9ULM0 1364 aa14.09□□□□□ -0.15
MSH5-218ENST00000494646 PIK3C2GO75747 1445 aa14.08□□□□□ -0.15
MSH5-218ENST00000494646 HRCP23327 699 aa14.08□□□□□ -0.16
MSH5-218ENST00000494646 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
MSH5-218ENST00000494646 YTHDC2Q9H6S0 1430 aaKnown RBP14.07□□□□□ -0.16
MSH5-218ENST00000494646 KCNA4P22459 653 aa14.07□□□□□ -0.16
MSH5-218ENST00000494646 SAFB2Q14151 953 aaKnown RBP eCLIP14.07□□□□□ -0.16
MSH5-218ENST00000494646 DCAF11Q8TEB1 546 aa14.07□□□□□ -0.16
MSH5-218ENST00000494646 DHX57Q6P158 1386 aaKnown RBP14.07□□□□□ -0.16
MSH5-218ENST00000494646 FOXO3O43524 673 aa14.06□□□□□ -0.16
MSH5-218ENST00000494646 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
MSH5-218ENST00000494646 ZNF772Q68DY9 489 aaPredicted RBP14.06□□□□□ -0.16
MSH5-218ENST00000494646 PRAG1Q86YV5 1406 aa14.06□□□□□ -0.16
MSH5-218ENST00000494646 ADAMTS2O95450 1211 aa14.05□□□□□ -0.16
MSH5-218ENST00000494646 C8orf37Q96NL8 207 aa14.05□□□□□ -0.16
MSH5-218ENST00000494646 SOS2Q07890 1332 aaPredicted RBP14.05□□□□□ -0.16
MSH5-218ENST00000494646 PNPLA6Q8IY17 1366 aa14.05□□□□□ -0.16
MSH5-218ENST00000494646 RGPD8O14715 1765 aaPredicted RBP14.04□□□□□ -0.16
MSH5-218ENST00000494646 SIRT1Q96EB6 747 aa14.04□□□□□ -0.16
MSH5-218ENST00000494646 TRAK1Q9UPV9 953 aa14.04□□□□□ -0.16
MSH5-218ENST00000494646 AFF2P51816 1311 aa14.04□□□□□ -0.16
MSH5-218ENST00000494646 TECPR2O15040 1411 aa14.04□□□□□ -0.16
MSH5-218ENST00000494646 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
MSH5-218ENST00000494646 PRAM1Q96QH2 718 aa14.03□□□□□ -0.16
MSH5-218ENST00000494646 POGKQ9P215 609 aa14.03□□□□□ -0.16
MSH5-218ENST00000494646 NRXN1Q9ULB1 1477 aa14.02□□□□□ -0.16
MSH5-218ENST00000494646 NGLY1Q96IV0 654 aa14.02□□□□□ -0.17
MSH5-218ENST00000494646 CDC42BPGQ6DT37 1551 aa14.01□□□□□ -0.17
MSH5-218ENST00000494646 MYOM2P54296 1465 aa14.01□□□□□ -0.17
MSH5-218ENST00000494646 NPHP3Q7Z494 1330 aa14.01□□□□□ -0.17
MSH5-218ENST00000494646 RXRBP28702 533 aa14.01□□□□□ -0.17
MSH5-218ENST00000494646 QTRT2Q9H974 415 aaKnown RBP14.01□□□□□ -0.17
MSH5-218ENST00000494646 LAMC1P11047 1609 aa14.01□□□□□ -0.17
MSH5-218ENST00000494646 FMN2Q9NZ56 1722 aa13.99□□□□□ -0.17
MSH5-218ENST00000494646 PLEKHG5O94827 1062 aa13.99□□□□□ -0.17
MSH5-218ENST00000494646 KRT28Q7Z3Y7 464 aa13.99□□□□□ -0.17
MSH5-218ENST00000494646 HIRIP3Q9BW71 556 aaPredicted RBP13.99□□□□□ -0.17
MSH5-218ENST00000494646 MINK1Q8N4C8 1332 aaPredicted RBP13.97□□□□□ -0.17
MSH5-218ENST00000494646 PMFBP1Q8TBY8 1022 aa13.97□□□□□ -0.17
MSH5-218ENST00000494646 PHF8Q9UPP1 1060 aa13.97□□□□□ -0.17
MSH5-218ENST00000494646 USP21Q9UK80 565 aa13.96□□□□□ -0.17
MSH5-218ENST00000494646 PXDNQ92626 1479 aa13.95□□□□□ -0.18
MSH5-218ENST00000494646 SLC24A1O60721 1099 aa13.95□□□□□ -0.18
MSH5-218ENST00000494646 PSME1Q06323 249 aa13.95□□□□□ -0.18
MSH5-218ENST00000494646 STAC3Q96MF2 364 aa13.95□□□□□ -0.18
MSH5-218ENST00000494646 ADGRB1O14514 1584 aa13.94□□□□□ -0.18
MSH5-218ENST00000494646 LMOD2Q6P5Q4 547 aa13.94□□□□□ -0.18
MSH5-218ENST00000494646 SPATA31A3Q5VYP0 1347 aa13.93□□□□□ -0.18
MSH5-218ENST00000494646 RBM6P78332 1123 aaKnown RBP13.93□□□□□ -0.18
MSH5-218ENST00000494646 DLC1Q96QB1 1528 aa13.93□□□□□ -0.18
MSH5-218ENST00000494646 CABLES1Q8TDN4 633 aa13.92□□□□□ -0.18
MSH5-218ENST00000494646 SIN3AQ96ST3 1273 aa13.92□□□□□ -0.18
MSH5-218ENST00000494646 COL22A1Q8NFW1 1626 aaPredicted RBP13.92□□□□□ -0.18
MSH5-218ENST00000494646 KIF1AQ12756 1690 aa13.91□□□□□ -0.18
MSH5-218ENST00000494646 WASLO00401 505 aaPredicted RBP13.91□□□□□ -0.18
MSH5-218ENST00000494646 NBPF1Q3BBV0 1214 aa13.91□□□□□ -0.18
MSH5-218ENST00000494646 FNBP4Q8N3X1 1017 aaPredicted RBP13.91□□□□□ -0.18
MSH5-218ENST00000494646 UPF1Q92900 1129 aaKnown RBP eCLIP13.91□□□□□ -0.18
MSH5-218ENST00000494646 USP32Q8NFA0 1604 aa13.9□□□□□ -0.18
MSH5-218ENST00000494646 MARF1Q9Y4F3 1742 aaKnown RBP13.9□□□□□ -0.18
MSH5-218ENST00000494646 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
MSH5-218ENST00000494646 TRPC5Q9UL62 973 aaPredicted RBP13.9□□□□□ -0.18
MSH5-218ENST00000494646 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.19
MSH5-218ENST00000494646 HAP1P54257 671 aaPredicted RBP13.89□□□□□ -0.19
MSH5-218ENST00000494646 ARHGEF28Q8N1W1 1705 aaKnown RBP13.87□□□□□ -0.19
MSH5-218ENST00000494646 ADRA2BP18089 450 aa13.87□□□□□ -0.19
MSH5-218ENST00000494646 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
MSH5-218ENST00000494646 L3MBTL2Q969R5 705 aa13.87□□□□□ -0.19
MSH5-218ENST00000494646 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
MSH5-218ENST00000494646 PAK3O75914 559 aaPredicted RBP13.86□□□□□ -0.19
MSH5-218ENST00000494646 NUDT16Q96DE0 195 aaKnown RBP13.86□□□□□ -0.19
MSH5-218ENST00000494646 RGS12O14924 1447 aa13.86□□□□□ -0.19
MSH5-218ENST00000494646 TNS3Q68CZ2 1445 aa13.85□□□□□ -0.19
MSH5-218ENST00000494646 ANKARQ7Z5J8 1434 aa13.85□□□□□ -0.19
MSH5-218ENST00000494646 BCL9LQ86UU0 1499 aa13.85□□□□□ -0.19
MSH5-218ENST00000494646 CDK12Q9NYV4 1490 aaPredicted RBP13.85□□□□□ -0.19
MSH5-218ENST00000494646 SBNO1A3KN83 1393 aa13.84□□□□□ -0.19
MSH5-218ENST00000494646 ADGRB2O60241 1585 aa13.84□□□□□ -0.19
MSH5-218ENST00000494646 GJD4Q96KN9 370 aaPredicted RBP13.84□□□□□ -0.19
MSH5-218ENST00000494646 KIAA1210Q9ULL0 1709 aa13.84□□□□□ -0.19
MSH5-218ENST00000494646 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.19
MSH5-218ENST00000494646 ATRNO75882 1429 aa13.83□□□□□ -0.2
MSH5-218ENST00000494646 UNC5CLQ8IV45 518 aa13.83□□□□□ -0.2
MSH5-218ENST00000494646 TULP4Q9NRJ4 1543 aa13.83□□□□□ -0.2
MSH5-218ENST00000494646 FAM83GA6ND36 823 aa13.82□□□□□ -0.2
MSH5-218ENST00000494646 EIF3AQ14152 1382 aaKnown RBP13.82□□□□□ -0.2
MSH5-218ENST00000494646 CCDC9Q9Y3X0 531 aaKnown RBP13.81□□□□□ -0.2
MSH5-218ENST00000494646 ARHGEF10O15013 1369 aa13.81□□□□□ -0.2
MSH5-218ENST00000494646 CABP2Q9NPB3 220 aa13.8□□□□□ -0.2
MSH5-218ENST00000494646 TRPM3Q9HCF6 1732 aaPredicted RBP13.8□□□□□ -0.2
MSH5-218ENST00000494646 SRPK2P78362 688 aaKnown RBP13.79□□□□□ -0.2
MSH5-218ENST00000494646 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
MSH5-218ENST00000494646 NUTM2GQ5VZR2 741 aa13.79□□□□□ -0.2
MSH5-218ENST00000494646 CCDC61Q9Y6R9 512 aa13.79□□□□□ -0.2
MSH5-218ENST00000494646 ACEP12821 1306 aa13.79□□□□□ -0.2
MSH5-218ENST00000494646 SLIT2O94813 1529 aa13.79□□□□□ -0.2
MSH5-218ENST00000494646 ITSN1Q15811 1721 aa13.78□□□□□ -0.2
MSH5-218ENST00000494646 CENPJQ9HC77 1338 aaPredicted RBP13.78□□□□□ -0.2
MSH5-218ENST00000494646 ALS2Q96Q42 1657 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms