RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 VGFO15240 615 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-212ENST00000494610 WAPLQ7Z5K2 1190 aa17.67■□□□□ 0.42
CSNK1E-212ENST00000494610 TRPC5Q9UL62 973 aaPredicted RBP17.67■□□□□ 0.42
CSNK1E-212ENST00000494610 FOXO3O43524 673 aa17.66■□□□□ 0.42
CSNK1E-212ENST00000494610 STK26Q9P289 416 aa17.66■□□□□ 0.42
CSNK1E-212ENST00000494610 ATAD2Q6PL18 1390 aa17.66■□□□□ 0.42
CSNK1E-212ENST00000494610 COL22A1Q8NFW1 1626 aaPredicted RBP17.65■□□□□ 0.42
CSNK1E-212ENST00000494610 MYOM2P54296 1465 aa17.65■□□□□ 0.42
CSNK1E-212ENST00000494610 BCL9LQ86UU0 1499 aa17.65■□□□□ 0.42
CSNK1E-212ENST00000494610 PXDNQ92626 1479 aa17.65■□□□□ 0.42
CSNK1E-212ENST00000494610 ADGRF5Q8IZF2 1346 aa17.65■□□□□ 0.42
CSNK1E-212ENST00000494610 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
CSNK1E-212ENST00000494610 PLEKHG5O94827 1062 aa17.63■□□□□ 0.41
CSNK1E-212ENST00000494610 PLEKHH1Q9ULM0 1364 aa17.63■□□□□ 0.41
CSNK1E-212ENST00000494610 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
CSNK1E-212ENST00000494610 RGL3Q3MIN7 710 aa17.62■□□□□ 0.41
CSNK1E-212ENST00000494610 TMEM132EQ6IEE7 984 aa17.62■□□□□ 0.41
CSNK1E-212ENST00000494610 RRBP1Q9P2E9 1410 aaKnown RBP17.62■□□□□ 0.41
CSNK1E-212ENST00000494610 PRAG1Q86YV5 1406 aa17.61■□□□□ 0.41
CSNK1E-212ENST00000494610 MARF1Q9Y4F3 1742 aaKnown RBP17.61■□□□□ 0.41
CSNK1E-212ENST00000494610 RPGRIP1LQ68CZ1 1315 aa17.6■□□□□ 0.41
CSNK1E-212ENST00000494610 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
CSNK1E-212ENST00000494610 CDC42BPGQ6DT37 1551 aa17.6■□□□□ 0.41
CSNK1E-212ENST00000494610 GJD4Q96KN9 370 aaPredicted RBP17.58■□□□□ 0.4
CSNK1E-212ENST00000494610 ZRANB1Q9UGI0 708 aa17.57■□□□□ 0.4
CSNK1E-212ENST00000494610 CABLES1Q8TDN4 633 aa17.56■□□□□ 0.4
CSNK1E-212ENST00000494610 GLI3P10071 1580 aa17.56■□□□□ 0.4
CSNK1E-212ENST00000494610 BRWD3Q6RI45 1802 aa17.55■□□□□ 0.4
CSNK1E-212ENST00000494610 RGPD8O14715 1765 aaPredicted RBP17.54■□□□□ 0.4
CSNK1E-212ENST00000494610 DEFB132Q7Z7B7 95 aa17.54■□□□□ 0.4
CSNK1E-212ENST00000494610 RALGAPBQ86X10 1494 aa17.54■□□□□ 0.4
CSNK1E-212ENST00000494610 LRPPRCP42704 1394 aaKnown RBP17.53■□□□□ 0.4
CSNK1E-212ENST00000494610 FMN2Q9NZ56 1722 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 SPATA31A3Q5VYP0 1347 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 KRT28Q7Z3Y7 464 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 UNC5CLQ8IV45 518 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 SPATA31E1Q6ZUB1 1445 aa17.52■□□□□ 0.4
CSNK1E-212ENST00000494610 SLIT2O94813 1529 aa17.52■□□□□ 0.39
CSNK1E-212ENST00000494610 TECPR2O15040 1411 aa17.51■□□□□ 0.39
CSNK1E-212ENST00000494610 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.5■□□□□ 0.39
CSNK1E-212ENST00000494610 CCDC144AA2RUR9 1427 aa17.49■□□□□ 0.39
CSNK1E-212ENST00000494610 SAFB2Q14151 953 aaKnown RBP eCLIP17.49■□□□□ 0.39
CSNK1E-212ENST00000494610 ABCC11Q96J66 1382 aa17.49■□□□□ 0.39
CSNK1E-212ENST00000494610 YTHDC2Q9H6S0 1430 aaKnown RBP17.48■□□□□ 0.39
CSNK1E-212ENST00000494610 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
CSNK1E-212ENST00000494610 KNDC1Q76NI1 1749 aa17.48■□□□□ 0.39
CSNK1E-212ENST00000494610 TRIM26Q12899 539 aaPredicted RBP17.48■□□□□ 0.39
CSNK1E-212ENST00000494610 PIK3C2GO75747 1445 aa17.47■□□□□ 0.39
CSNK1E-212ENST00000494610 SEPT12Q8IYM1 358 aa17.47■□□□□ 0.39
CSNK1E-212ENST00000494610 MPHOSPH9Q99550 1183 aa17.47■□□□□ 0.39
CSNK1E-212ENST00000494610 LMOD2Q6P5Q4 547 aa17.46■□□□□ 0.39
CSNK1E-212ENST00000494610 CCDC125Q86Z20 511 aa17.46■□□□□ 0.39
CSNK1E-212ENST00000494610 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 CFAP70Q5T0N1 1121 aa17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 PHF8Q9UPP1 1060 aa17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 BLMP54132 1417 aaPredicted RBP17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 KIF1AQ12756 1690 aa17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
CSNK1E-212ENST00000494610 PMFBP1Q8TBY8 1022 aa17.44■□□□□ 0.38
CSNK1E-212ENST00000494610 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
CSNK1E-212ENST00000494610 ANKRD30BQ9BXX2 1392 aa17.43■□□□□ 0.38
CSNK1E-212ENST00000494610 TNS3Q68CZ2 1445 aa17.43■□□□□ 0.38
CSNK1E-212ENST00000494610 ABCA3Q99758 1704 aa17.43■□□□□ 0.38
CSNK1E-212ENST00000494610 FAM83GA6ND36 823 aa17.42■□□□□ 0.38
CSNK1E-212ENST00000494610 VPS72Q15906 364 aa17.42■□□□□ 0.38
CSNK1E-212ENST00000494610 PRAM1Q96QH2 718 aa17.42■□□□□ 0.38
CSNK1E-212ENST00000494610 PSDA5PKW4 1024 aaPredicted RBP17.41■□□□□ 0.38
CSNK1E-212ENST00000494610 FAM182BQ5T319 152 aa17.41■□□□□ 0.38
CSNK1E-212ENST00000494610 C14orf93Q9H972 538 aaKnown RBP17.41■□□□□ 0.38
CSNK1E-212ENST00000494610 PSME1Q06323 249 aa17.39■□□□□ 0.37
CSNK1E-212ENST00000494610 KRT27Q7Z3Y8 459 aa17.39■□□□□ 0.37
CSNK1E-212ENST00000494610 HIRIP3Q9BW71 556 aaPredicted RBP17.39■□□□□ 0.37
CSNK1E-212ENST00000494610 NRXN1Q9ULB1 1477 aa17.38■□□□□ 0.37
CSNK1E-212ENST00000494610 A0A0G2JS52 829 aa17.38■□□□□ 0.37
CSNK1E-212ENST00000494610 ONECUT3O60422 494 aaPredicted RBP17.38■□□□□ 0.37
CSNK1E-212ENST00000494610 MYT1Q01538 1121 aa17.38■□□□□ 0.37
CSNK1E-212ENST00000494610 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
CSNK1E-212ENST00000494610 NWD2Q9ULI1 1742 aa17.36■□□□□ 0.37
CSNK1E-212ENST00000494610 SF3B2Q13435 895 aaKnown RBP17.36■□□□□ 0.37
CSNK1E-212ENST00000494610 SIRT1Q96EB6 747 aa17.36■□□□□ 0.37
CSNK1E-212ENST00000494610 BTG4Q9NY30 223 aa17.35■□□□□ 0.37
CSNK1E-212ENST00000494610 SBNO1A3KN83 1393 aa17.35■□□□□ 0.37
CSNK1E-212ENST00000494610 DHX57Q6P158 1386 aaKnown RBP17.35■□□□□ 0.37
CSNK1E-212ENST00000494610 NRAPQ86VF7 1730 aa17.35■□□□□ 0.37
CSNK1E-212ENST00000494610 PRR36Q9H6K5 1346 aa17.34■□□□□ 0.37
CSNK1E-212ENST00000494610 POGKQ9P215 609 aa17.34■□□□□ 0.37
CSNK1E-212ENST00000494610 TRPM3Q9HCF6 1732 aaPredicted RBP17.33■□□□□ 0.37
CSNK1E-212ENST00000494610 MINK1Q8N4C8 1332 aaPredicted RBP17.33■□□□□ 0.36
CSNK1E-212ENST00000494610 EN1Q05925 392 aaPredicted RBP17.33■□□□□ 0.36
CSNK1E-212ENST00000494610 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.36
CSNK1E-212ENST00000494610 ARHGEF10O15013 1369 aa17.31■□□□□ 0.36
CSNK1E-212ENST00000494610 HRCP23327 699 aa17.3■□□□□ 0.36
CSNK1E-212ENST00000494610 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
CSNK1E-212ENST00000494610 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
CSNK1E-212ENST00000494610 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
CSNK1E-212ENST00000494610 LRP5O75197 1615 aa17.29■□□□□ 0.36
CSNK1E-212ENST00000494610 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.36
CSNK1E-212ENST00000494610 PAK3O75914 559 aaPredicted RBP17.27■□□□□ 0.36
CSNK1E-212ENST00000494610 BAG6P46379 1132 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms