RNA–Protein interactions for RNA: ENST00000494538.6

CBWD6-208, Transcript of COBW domain containing 6, humanhuman

TSL 1 (best)

Gene CBWD6, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD6-208ENST00000494538 SBNO2Q9Y2G9 1366 aa18.03■□□□□ 0.48
CBWD6-208ENST00000494538 KIF7Q2M1P5 1343 aa18.02■□□□□ 0.48
CBWD6-208ENST00000494538 CCDC7Q96M83 1385 aa18.02■□□□□ 0.47
CBWD6-208ENST00000494538 NWD1Q149M9 1564 aa18.01■□□□□ 0.47
CBWD6-208ENST00000494538 RBM33Q96EV2 1170 aaKnown RBP18■□□□□ 0.47
CBWD6-208ENST00000494538 EVC2Q86UK5 1308 aa18■□□□□ 0.47
CBWD6-208ENST00000494538 CDCA8Q53HL2 280 aa18■□□□□ 0.47
CBWD6-208ENST00000494538 PROSER2Q86WR7 435 aaPredicted RBP17.99■□□□□ 0.47
CBWD6-208ENST00000494538 ZNF335Q9H4Z2 1342 aaPredicted RBP17.98■□□□□ 0.47
CBWD6-208ENST00000494538 SRPK2P78362 688 aaKnown RBP17.98■□□□□ 0.47
CBWD6-208ENST00000494538 C14orf37Q86TY3 774 aa17.98■□□□□ 0.47
CBWD6-208ENST00000494538 NKTRP30414 1462 aaKnown RBP17.97■□□□□ 0.47
CBWD6-208ENST00000494538 STRCP1A6NGW2 1772 aa17.97■□□□□ 0.47
CBWD6-208ENST00000494538 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
CBWD6-208ENST00000494538 DDX10Q13206 875 aaKnown RBP17.97■□□□□ 0.47
CBWD6-208ENST00000494538 TULP4Q9NRJ4 1543 aa17.97■□□□□ 0.47
CBWD6-208ENST00000494538 CDK19Q9BWU1 502 aa17.95■□□□□ 0.46
CBWD6-208ENST00000494538 CABP2Q9NPB3 220 aa17.95■□□□□ 0.46
CBWD6-208ENST00000494538 WASLO00401 505 aaPredicted RBP17.93■□□□□ 0.46
CBWD6-208ENST00000494538 TMEM94Q12767 1356 aa17.92■□□□□ 0.46
CBWD6-208ENST00000494538 ADGRB2O60241 1585 aa17.92■□□□□ 0.46
CBWD6-208ENST00000494538 NALCNQ8IZF0 1738 aa17.91■□□□□ 0.46
CBWD6-208ENST00000494538 NUTM2FA1L443 756 aa17.91■□□□□ 0.46
CBWD6-208ENST00000494538 TMC1Q8TDI8 760 aa17.91■□□□□ 0.46
CBWD6-208ENST00000494538 ADGRL3Q9HAR2 1447 aa17.9■□□□□ 0.46
CBWD6-208ENST00000494538 DIEXFQ68CQ4 756 aaKnown RBP17.88■□□□□ 0.45
CBWD6-208ENST00000494538 PUS7Q96PZ0 661 aaKnown RBP17.88■□□□□ 0.45
CBWD6-208ENST00000494538 ATAD2Q6PL18 1390 aa17.88■□□□□ 0.45
CBWD6-208ENST00000494538 LRRC7Q96NW7 1537 aa17.87■□□□□ 0.45
CBWD6-208ENST00000494538 NUDT16Q96DE0 195 aaKnown RBP17.86■□□□□ 0.45
CBWD6-208ENST00000494538 MYOM1P52179 1685 aa17.86■□□□□ 0.45
CBWD6-208ENST00000494538 C19orf44Q9H6X5 657 aa17.86■□□□□ 0.45
CBWD6-208ENST00000494538 CDC42BPGQ6DT37 1551 aa17.85■□□□□ 0.45
CBWD6-208ENST00000494538 NCOA3Q9Y6Q9 1424 aa17.85■□□□□ 0.45
CBWD6-208ENST00000494538 SLC12A5Q9H2X9 1139 aa17.85■□□□□ 0.45
CBWD6-208ENST00000494538 PANK3Q9H999 370 aa17.84■□□□□ 0.45
CBWD6-208ENST00000494538 CABP1Q9NZU7 370 aa17.84■□□□□ 0.45
CBWD6-208ENST00000494538 PRR36Q9H6K5 1346 aa17.84■□□□□ 0.45
CBWD6-208ENST00000494538 MSH6P52701 1360 aa17.83■□□□□ 0.45
CBWD6-208ENST00000494538 FMN2Q9NZ56 1722 aa17.83■□□□□ 0.44
CBWD6-208ENST00000494538 ATF3P18847 181 aa17.83■□□□□ 0.44
CBWD6-208ENST00000494538 CCDC61Q9Y6R9 512 aa17.83■□□□□ 0.44
CBWD6-208ENST00000494538 ATP7BP35670 1465 aa17.83■□□□□ 0.44
CBWD6-208ENST00000494538 XIRP1Q702N8 1843 aaKnown RBP17.82■□□□□ 0.44
CBWD6-208ENST00000494538 PPIP5K1Q6PFW1 1433 aa17.82■□□□□ 0.44
CBWD6-208ENST00000494538 NINLQ9Y2I6 1382 aa17.82■□□□□ 0.44
CBWD6-208ENST00000494538 USP32Q8NFA0 1604 aa17.8■□□□□ 0.44
CBWD6-208ENST00000494538 ANKARQ7Z5J8 1434 aa17.8■□□□□ 0.44
CBWD6-208ENST00000494538 LTBP4Q8N2S1 1624 aa17.79■□□□□ 0.44
CBWD6-208ENST00000494538 CADPS2Q86UW7 1296 aa17.79■□□□□ 0.44
CBWD6-208ENST00000494538 TERF2IPQ9NYB0 399 aa17.79■□□□□ 0.44
CBWD6-208ENST00000494538 RGPD8O14715 1765 aaPredicted RBP17.79■□□□□ 0.44
CBWD6-208ENST00000494538 DCCP43146 1447 aa17.78■□□□□ 0.44
CBWD6-208ENST00000494538 CNGB1Q14028 1251 aaPredicted RBP17.78■□□□□ 0.44
CBWD6-208ENST00000494538 HDGFL2Q7Z4V5 671 aaPredicted RBP17.78■□□□□ 0.44
CBWD6-208ENST00000494538 ITSN1Q15811 1721 aa17.77■□□□□ 0.44
CBWD6-208ENST00000494538 PMFBP1Q8TBY8 1022 aa17.77■□□□□ 0.44
CBWD6-208ENST00000494538 ANKRD36BQ8N2N9 1353 aa17.77■□□□□ 0.44
CBWD6-208ENST00000494538 TOPAZ1Q8N9V7 1692 aa17.77■□□□□ 0.43
CBWD6-208ENST00000494538 ESCO1Q5FWF5 840 aa17.77■□□□□ 0.43
CBWD6-208ENST00000494538 KNSTRNQ9Y448 316 aa17.76■□□□□ 0.43
CBWD6-208ENST00000494538 A0A1W2PP64 1363 aa17.76■□□□□ 0.43
CBWD6-208ENST00000494538 NGDNQ8NEJ9 315 aaKnown RBP17.75■□□□□ 0.43
CBWD6-208ENST00000494538 ACEP12821 1306 aa17.74■□□□□ 0.43
CBWD6-208ENST00000494538 PLEKHG3A1L390 1219 aa17.74■□□□□ 0.43
CBWD6-208ENST00000494538 CARD14Q9BXL6 1004 aa17.74■□□□□ 0.43
CBWD6-208ENST00000494538 C1orf167Q5SNV9 1468 aa17.74■□□□□ 0.43
CBWD6-208ENST00000494538 CD163L1Q9NR16 1453 aa17.74■□□□□ 0.43
CBWD6-208ENST00000494538 MST1RQ04912 1400 aa17.73■□□□□ 0.43
CBWD6-208ENST00000494538 PER1O15534 1290 aaPredicted RBP17.73■□□□□ 0.43
CBWD6-208ENST00000494538 ORAI2Q96SN7 254 aa17.73■□□□□ 0.43
CBWD6-208ENST00000494538 PHF8Q9UPP1 1060 aa17.73■□□□□ 0.43
CBWD6-208ENST00000494538 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
CBWD6-208ENST00000494538 KTN1Q86UP2 1357 aaKnown RBP17.72■□□□□ 0.43
CBWD6-208ENST00000494538 ANP32CO43423 234 aa17.71■□□□□ 0.43
CBWD6-208ENST00000494538 ZNF692Q9BU19 519 aaPredicted RBP17.71■□□□□ 0.43
CBWD6-208ENST00000494538 CPSF1Q10570 1443 aaKnown RBP17.71■□□□□ 0.43
CBWD6-208ENST00000494538 SLAIN2Q9P270 581 aa17.7■□□□□ 0.42
CBWD6-208ENST00000494538 CC2D1BQ5T0F9 858 aaKnown RBP17.7■□□□□ 0.42
CBWD6-208ENST00000494538 POLR3AO14802 1390 aaPredicted RBP17.69■□□□□ 0.42
CBWD6-208ENST00000494538 AKAP12Q02952 1782 aa17.68■□□□□ 0.42
CBWD6-208ENST00000494538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.68■□□□□ 0.42
CBWD6-208ENST00000494538 CGNL1Q0VF96 1302 aa17.68■□□□□ 0.42
CBWD6-208ENST00000494538 FOXO3O43524 673 aa17.67■□□□□ 0.42
CBWD6-208ENST00000494538 PSME1Q06323 249 aa17.67■□□□□ 0.42
CBWD6-208ENST00000494538 AMER1Q5JTC6 1135 aaPredicted RBP17.66■□□□□ 0.42
CBWD6-208ENST00000494538 MON2Q7Z3U7 1717 aa17.66■□□□□ 0.42
CBWD6-208ENST00000494538 USP6P35125 1406 aa17.66■□□□□ 0.42
CBWD6-208ENST00000494538 EDC4Q6P2E9 1401 aaKnown RBP17.66■□□□□ 0.42
CBWD6-208ENST00000494538 KIF1AQ12756 1690 aa17.66■□□□□ 0.42
CBWD6-208ENST00000494538 MIER1Q8N108 512 aa17.65■□□□□ 0.42
CBWD6-208ENST00000494538 PAK3O75914 559 aaPredicted RBP17.64■□□□□ 0.41
CBWD6-208ENST00000494538 BRINP3Q76B58 766 aa17.64■□□□□ 0.41
CBWD6-208ENST00000494538 PRKRIP1Q9H875 184 aaPredicted RBP17.64■□□□□ 0.41
CBWD6-208ENST00000494538 XPCQ01831 940 aaPredicted RBP17.63■□□□□ 0.41
CBWD6-208ENST00000494538 TTC21BQ7Z4L5 1316 aa17.63■□□□□ 0.41
CBWD6-208ENST00000494538 CERKQ8TCT0 537 aa17.62■□□□□ 0.41
CBWD6-208ENST00000494538 DDX17Q92841 729 aaKnown RBP17.62■□□□□ 0.41
CBWD6-208ENST00000494538 GGNBP2Q9H3C7 697 aa17.62■□□□□ 0.41
CBWD6-208ENST00000494538 FYB1O15117 783 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms